Array 1 2934741-2931911 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050455.1 Klebsiella pneumoniae strain NMI4661_17 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2934740 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 2934681 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 2934620 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 2934559 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 2934498 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 2934437 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 2934376 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 2934315 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 2934254 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 2934193 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 2934132 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 2934071 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 2934010 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 2933949 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 2933888 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 2933827 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 2933766 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 2933705 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 2933644 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 2933583 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 2933522 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 2933461 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 2933400 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 2933339 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 2933278 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 2933217 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 2933156 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 2933095 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 2933034 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 2932973 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 2932912 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 2932851 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 2932790 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 2932729 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 2932668 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 2932607 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 2932546 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 2932485 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 2932424 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 2932363 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 2932302 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 2932241 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 2932180 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 2932119 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 2932058 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 2931997 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 2931939 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 47 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //