Array 1 171239-172243 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KV802399.1 Facklamia sp. HMSC062C11 Scaffold93, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    171239	    29	 100.0	    32	.............................	TGGAAATTTGCTTTTGAAAAGCTGGACTTAAA	
    171300	    29	  96.6	    32	............................C	GTTTTGTGACTAGAGTTGACATTTTTAGCATG	
    171361	    29	 100.0	    32	.............................	AGTCATGTTTTGCCAAATCCCTAAAGCATAAA	
    171422	    29	  96.6	    32	............................C	TCATATTCGCCACCCCAAATATCAAGAATTGA	
    171483	    29	 100.0	    32	.............................	TTCTGAATGACATAATCAAAAGCTTCACCGGC	
    171544	    29	  96.6	    32	............................C	GCCTTGGGGGCTTTATCACTAGCCGCTTATAA	
    171605	    29	 100.0	    32	.............................	TCGATTTGAAGCAAGTGATGAATTAGTTGATA	
    171666	    29	 100.0	    32	.............................	AGCCCCAGGCTTAATTTTGTCTAAGTACGCTT	
    171727	    29	 100.0	    32	.............................	AGTACCGTTCGGGTATATCTACGACCGTCTTA	
    171788	    29	  96.6	    32	............................C	CGGGCATACGAGGCTAAAAGCAGCAAAGAAGC	
    171849	    29	  93.1	    32	...........A................C	GGTATTATTCCTGAGATGGAAAGTATCACAGT	
    171910	    29	  93.1	    32	...........A................C	TCATTCAAACAGCGACAATAAGCGGTTTGTTG	
    171971	    29	  89.7	    32	...........A........A.......C	GCAATCACACCTTGGATGTAACCTTCTTTTAA	
    172032	    29	  93.1	    32	...........A........A........	GATTGTGAAGGATGAAGCCTTTGCGAAGTTAG	
    172093	    29	  93.1	    32	...........A........A........	TATCCACATCAAACAGGAGCGGTTACTATTTC	
    172154	    29	  93.1	    32	...........A........A........	TTTTGATGGGCAAATATAACGTGCCCTTAGAG	
    172215	    28	  93.1	     0	...........A.....-...........	|                               	A [172241]
==========	======	======	======	=============================	================================	==================
        17	    29	  96.2	    32	GTTCTTCCCGCGCAAGCGGGGGTGATCCT	                                	       

# Left flank :   TCAAAGAAACATGCCATTATTGAGATAGCAGCTGTGTTGGTTGAAGCGGATAAATTAACCATGTTCTCCTCTTTGATAAATACAGGTAGATCCTTAAATGAAGAGATTATAGATTTAACAGGGATTACTAATCAGTGCTTGATAGAGAATGGCAAACCCATTGAAGAGGTGTTACTTGAGTTTTTGGACTTCCTGGGAGACCAGCTAGTTGTTGGCTATGGGGTTGCGTTTGATATAGAGTTTTTAAACAAAGCATTAGAAAAAATGGGTAAATCAGCTATAAGCAATCAGATCGTTGATTTAAAGAGACTTGTAAAAAAAGAAAACATGTTTCTAGCAAATTATAAATTGGAAACAGTTCTTAACGCATATGGGATCGATAAAAAAGTACCTCATCGGGCTTTAGAGGATTCTAAACTTATTTATGAGTTATCCACTAAAGTGAATTTATTTTTGAAGATGGTCGAAGAGAAAGCTTGATTTTAAAGGGATCTTTTACT
# Right flank :  TTTTATTATTCGATGAAATCAGCTGGTCGCGAGATGTGTGCCCCTTTGCAACATCAGATTGTGACTAAAGGCGAGGCGTTCATGGCTGAAGATGGCACACAGGTCTATTCGCTCAACGATTATGGTTATGGCTCTCCTGGGGGCTGTCTAGGAATTAACTGTGGTCATATGATGACACCTTTCATCATTGGCGCTAATTACAAGCCCGAATTGCCAGATTATCTGAAGAATCTAACTCCTGAACAGGCAGAAGAAAATGCCCGAACACAACAAGTGCAGCGTGCTTATGAGCGAAATATTCGCAAAGAAAAAGAACGTTTAGCAGTGGCTAAGGAATTGAAAGATGTTGATCGAATTCAAAAGTCACAACTCAAGATCAAGGCGTTAGAGTCAGGACTTATGAAGTTGGTTAAAGACAATGATTTCCTAATTCGTAAGAAAGAGCGAGAGCGTTATTATAATAATCTAGAATCATACAATAAAGCTAAGCAGAACATGGA

# Questionable array : NO	 Score: 5.60
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.53,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCTTCCCGCGCAAGCGGGGGTGATCCT
# Alternate repeat :   GTTCTTCCCGCACAAGCGGGAGTGATCC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCTCCCCGCGCAGGCGGGGGTGATCCG with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-10.70,-9.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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