Array 1 119486-119635 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061474.1 Geobacillus sp. 46C-IIa chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 119486 30 100.0 22 .............................. GAAGCGGAGGATCGCCGTGTTA 119538 30 100.0 38 .............................. ATAAGCTCCACAACCGGCATAAACGCGGCGGTGATCTT 119606 30 90.0 0 ..........................CCC. | ========== ====== ====== ====== ============================== ====================================== ================== 3 30 96.7 30 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AACACGCCGCTGGTGGTGGACGGTCGGAATTGCTACGACCCGAAGGCGGCGGAAGCCGCCGGCTTAATCTACGAGTCGGTCGGGCGGCCGGCCGGCTCGGGACTGCGGGCGGAGGATGAGGCCGCTGATGTGCAGCGGCAGGTGTAAGGAATTGAACTAGGAAGGAAACAAGGGCATCAACAAGAGATCGCGGAAGGCAACCTCGACGTGGCGAAGAGAATGCTGGCGAAAGGACGCGATGTCGACGCAATCCGTGAACTGACCGGGCTTCTGGTGGAGAAGATTGAAAAGGTGAAGAGGTAGGCCGGCCCTTCGCTGCTGGTCCAACTGTTGTCGTCGATCCCCAATCGTGCAAAAAACCTGGGGGATCGACGACAATTCGTTTATGCGCTTCAACCTTACAGGCATCAGGGAAGAAGCTTGTTGACAGAATTTTTAAAACGTGTTATTCTGGAGGCGAGAAAAGAACGCAAGGCTTGATATATTAAGATGTTTTTGGG # Right flank : CCCTGTTTAACAGTCAAATCACGTGGTACGGGGACAGTTTTATCGGCAACTTATAACGAATCGAACTCTACAGCGCGCTGTTGTTGTCTCTTTTGCGTTGGGTATATTTTATGATCCTAAAACTGGGAAACCCCCACTTCTGATCGGATCAGGGGAATTGTGGAATATGCCGAGAAGGCTTGATTCATAGTCTAGTGCAGGGTGGGTGTTTGCCAAAAATCTCCCGCCTTGAAACGTAAGTGGGGGGCATTCTTGGCGCGTTTTATGAAGGAATGAAACGCATATTTTCCATCTCCATGTACAGGATGCCCCTATCCTATGATGGAAACGAGAAAGAGCGGCTTTTCAAGAGGCTGCTTTTTTGTTTTTGTTGTGAAACGTTTTAAAATTTCAGTCAATTCGTTTATAATTTTATTATCTAGCACTGTTTCTGCTCACAAAATGAGTTCAAAGCAGGGAATGAATTCATGTCTGTTGCTAGGTGGGTATTTGTACGTATT # Questionable array : NO Score: 7.59 # Score Detail : 1:0, 2:3, 3:3, 4:0.84, 5:0, 6:0.25, 7:-0.59, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 1248183-1248600 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061474.1 Geobacillus sp. 46C-IIa chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1248183 29 100.0 35 ............................. CGCAATAGCCGACCACATGCGGCTCTTCCTGACGG 1248247 29 100.0 35 ............................. GAAAATAAATATCGCCATTTTCCACTAACACTTGC 1248311 29 100.0 36 ............................. ATGACTTTATTGCGGCAAAGTTGACGAAAGAACAGC 1248376 29 100.0 36 ............................. TCACGAGGGTTTCGCCGTATCGTTCGGACCCGCCTC 1248441 29 93.1 37 ............T..............G. GTGTATACGGGCGCATACGTCCGCACTCTCGGCCGTC 1248507 29 100.0 36 ............................. CTGAAAGCAACAACTTCGTCCTAAAAGGGATTGCCC 1248572 29 75.9 0 TT.....T.....C...C...C......T | ========== ====== ====== ====== ============================= ===================================== ================== 7 29 95.6 36 GGTTTATCTGAACGTAGTGGGATTTAAAG # Left flank : GGTATTTAACGGAAAAAGAATACCGGAAGCGTATCGATTTTTCCGATGGGGAAACGAGACGTATTTGGGAGTACGATGAGGAAAAGGTGAGCAAATTGATTGCCCGCATGCCGATGACAAAATGGAGCAGCAGTTCAAGGGGGCTGATCTCCTTTGAAAACAACGTGTTTGCACTCCAATTTTCCATCGCGCATGAACATGAAGAAATCTTGTACAATTGGACGAAAGAAGTTTGCGAGTATCGGTTGCATGTGTATTTTGAAAGGAAAGAGAGATGAAAAATTGATATATACAGTTGTTTCATTGGACGTTAAAAATCTGCAGTGAACCTCATTTTGATGGATAAACGGGGAAAGGCTTGGTTTATCAAGGGAAGTGACTCATTATTTGTATAACATAGAAAACACGATGATCGCTTTACTGCAAAATGAGGTATCATAGCTGTGTAGACGTTAGCCAGAATTGTGCATTACAGCAATAGTTTTGTTTTGTGATCGACA # Right flank : TTTAAATAAAAAAGTACTTTATAAAGAATATCGTGCATGGAGCAGTGGTGACTATGTAGTGATGGGTAAAGCCATCGACAGGGGGGCACATTGCCTGAACGCATGAGGATCAATATGTAAAACAATGCTTGACATGATAAGTCTGAAACGGGCGAATCGACTCATTGGCAGAATGCTTTGATAGGAGGCATTCTGCTTTTTTGTAGCAACAAATACAAAAAAACAACAAGGCTTATCTAAAAATTTTATTAAGTGACAAATTGCGACAAAATTTTTATCTATAACAAGATAATATATAGGTAAAAAGGAGGTGCATCATGAGACTTATCTGTTCTTTTGTTGCTGAAAAAATGCCTATTTCATACCGGATGATGTTAGTATCTGTGATAAAGGAGTCATTACGAATATCGGATGAACAATATTATAAGCGTTTTTATGAAAACACATCCATGAAACCGTTTGTGTTTTCCACATATTTGAAAGACTTTCATTTTGTTGAT # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTATCTGAACGTAGTGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 1257185-1259934 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061474.1 Geobacillus sp. 46C-IIa chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1257185 29 100.0 36 ............................. GAAGCTTATGGAACAAAAACTAAATGGGATGAATTA 1257250 29 100.0 36 ............................. TTTTCCAGCCAAGCCAGAGCCGCAGCGGGCGCACTT 1257315 29 100.0 35 ............................. TCAGAGCAACTGGAAATGATAATGGAGCAAATCAA 1257379 29 100.0 36 ............................. AGTGTTGAAAAGTGTTGAGGAAGAAATCAGCTTAGC 1257444 29 100.0 36 ............................. TTTACAGCAAGTACATTTCTTGAGAAGGGGCTGACA 1257509 29 100.0 35 ............................. ATGAATCGGGACGTATGGATTTAGTTGATTATTCG 1257573 29 100.0 36 ............................. GGAAGAAAAAATCGCCCTCTATCAAGAGGAACTTCC 1257638 29 100.0 37 ............................. CATTGCTATACATGGCTCGCCCGGACGAAACAAGAAT 1257704 29 100.0 35 ............................. TCTAGGGCTTCTTTTGGAAGAAAAGTGGACAAACA 1257768 29 100.0 34 ............................. CGAGCTTCTCACCATCCGGGGACGTCTCTTCCTT 1257831 29 100.0 34 ............................. GGCATTGGATAAACGGGATGAGGAGTGGTTTCAT 1257894 29 100.0 34 ............................. TCAAATGGTTTAACGAACAAGACTGGGAGAGATA 1257957 29 100.0 36 ............................. CAAGGGATCGAGCGATATAGGCAAAAACGTGATAAG 1258022 29 100.0 35 ............................. TTGGAAATGAGAAATGTGCTTCTTTTAATTATTAT 1258086 29 100.0 36 ............................. AGCTCTGCTTTTATGATTTGATTGGCGTCGATCGTG 1258151 29 100.0 36 ............................. TTTTCGTGATGTAAAATAGCCCCCGTCATACCCTTG 1258216 29 100.0 35 ............................. CTCGTCCTATCCGTAAAAGTCTTTTCTGTCAACAA 1258280 29 100.0 35 ............................. AAGAAGAGGAAAAGTTGGTTATTGACGGGGTTGTC 1258344 29 100.0 37 ............................. GAAAGATTGTTCTGCAAAAAAGATGGAACTGTTTGGC 1258410 29 100.0 36 ............................. TGCCGAACCGGAACCGATAAGGTATATACAGATTGC 1258475 29 100.0 36 ............................. AGGATGGAGCTGTTGCTTGATATTGTTGAGATGATC 1258540 29 100.0 35 ............................. TGTGAAAAATCGTGGATTGCTGACAGCATAGGAAA 1258604 29 100.0 35 ............................. TTTTCGTGATGTAAAATAGCCCCCGTCACACACTT 1258668 29 100.0 36 ............................. GTGTATGAAGAAGTTGACGGCGACTTTGAAATCATA 1258733 29 100.0 38 ............................. TTAAACTTCTCTTTTTTGTCGCTGATAATCGTTCGGAA 1258800 29 100.0 36 ............................. TGGGCATTACGACTATTAGGGGGGGCGTGCAGATTG 1258865 29 100.0 36 ............................. AGCAAGCTTATGAGCGTTTTATGCGAGAGGAGGAGC 1258930 29 100.0 38 ............................. ATGAAAATCGCAAACAAAAAAGAGAAACGATTGATTGA 1258997 29 100.0 36 ............................. AATTATAAAAGAACTGCGGTTCAAGCAAACAAGTCT 1259062 29 100.0 35 ............................. TGGCTTTGGCCGGAGCAAGAAGAACGGCACGTGTT 1259126 29 100.0 36 ............................. ATTGATGAAAAAGAACGGAACACCGTTTTGGATACG 1259191 29 100.0 35 ............................. CAATCTTCCGATACGTCTTTTCCCCAATCCCCTGC 1259255 29 100.0 36 ............................. CTCTAATCCGTTCCCATTCCCTGCTATGATAGAACG 1259320 29 100.0 36 ............................. GCTGTACGGGATAAATACAGGCATTTATTCCTTATC 1259385 29 100.0 35 ............................. TCAATCTCCTCGCCTGTGACCGCGTCGATCACAAC 1259449 29 100.0 36 ............................. TTCAAATACATTAATCATATGTTGATCAATATCCTC 1259514 29 100.0 36 ............................. GGACATGGTTGGTGACGCATGCGGGAATGGTTAGGG 1259579 29 100.0 35 ............................. CCTTTTCATCCGGTGTCAGCATCGTCAAAAACTCA 1259643 29 100.0 35 ............................. TCCGTAAAAGTCTTTTCTGTCGACAACCTCGAAAG 1259707 29 100.0 37 ............................. ACGAATTACCGGAAATCTTTAAATTTTGGAGCAATAA 1259773 29 100.0 37 ............................. TAATTTAATCGTGTTTTCGGGATATAAGTTCATGAGG 1259839 29 100.0 38 ............................. ATAATTAGGAGAAGTGTCAATCGTGTTCAATGGAAAGC 1259906 29 93.1 0 .T..........................C | ========== ====== ====== ====== ============================= ====================================== ================== 43 29 99.8 36 GGTTTATCTGAACGTAGTGGGATTTAAAT # Left flank : GGATGAACTATATAAACCGTTGAAAGCGTGGTGGTGAAACATGTTTGTTATCATTACGTATGACGTAGCGGAAAAGCGGGTCAACAAAGTTTGCAAAAAATTAAAGGAATATCTGACTTGGACGCAAAATAGCGTATTTGAAGGGGAGATTTCGAAAAGCCTGCTGATGAAGTGCATGTATGAATTGGAGATGATCATTGATAAAGAAGAAGACTCCATTTACTTATACGAAGTAGGAAATCCGAAGAATATAAAAAAGCGGGTATTTGGTCAGGAAAAGAATTTTGATGAGTTATTTCTTTGAGTTTTAACAATTTGCAGTGAACCCCATTTCAGTGGATAAATGGGGAAATGCTTGATTTATCAAGGGAAGTGCCTCATTATTTGTATAACACGGAAAACACGATTACCGCTTTACTGCAAAATGAGGTATAATGGACTGTGTAGGTGATAGCGCAAATTGCCTACTACATCAATAATTTTATTTTGTGATCGACAGG # Right flank : CAAAGGTTGTGTAAATGTATCGGTATTTAGGGTACCGTCAAGAATTTTGTGTAATGTAAGATAGATAGGGTATATCTGAAATGGATTTATATACATGCAACATGAAGAGTTAACTTCTCAATCATCCTGCACACCCCAAGCGCTGCAGCACTTCCTCTGGACGTTCGTGGATGTAGTGGACAAACCGAATAATGGCTTGAATGATATCATGGCGATCTTTGTGAAACACATTGGCCCTCACTGTATCTTTCCGCCATTTCCATAAGCGTTCGATCGGATTCAGTTGCGGTGAATATGGGGGAAGGTAAATAAAGTGAAAACACTGCCCTTCTTTCGGCAAAAACTCCTTGACCATTTTGGCATGGTGAATGCGGGCGTGATCCAACACCAAGATCATGAGGCGGTCCGGATTGCGCTCTTTGAGCATTCTCAAGAAATCCAAGAACGTCGCGGCATGGGCAGCGGTCGTTTGATGAAGTACCGTTTCGCCATCGTGTATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTATCTGAACGTAGTGGGATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 4 3082937-3082774 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061474.1 Geobacillus sp. 46C-IIa chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3082936 30 100.0 35 .............................. ACGGTGACAATGAGTGGGCGGCAAGCTCCAGTTTC 3082871 30 100.0 38 .............................. TGTATTGGATTGGGATGAAAATGATCAACATGTCGAAG 3082803 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ====================================== ================== 3 30 98.9 37 GTTTTTATCGTACCTATGAGGGATTGAAAT # Left flank : GAGACGATGGATGGGAGAAAGAAAACGCAATTTTTTGATCCTGATGATGAGGTATTCCCCCACTTGATTGAATTGAATTTCTGTCACAAATATGCAGCGTACTATGGTGTTCCGCCAGCGGAACGATTATCGATTCAACCGATCTATGTTCATCGGCGTCATCGTGTGGTCACACTATTCAAGGACATGTATATTACAGGCTGGATGGGACATTATCGCCTTTGTTCTTCGCCAGAACAGTTGACATTTTTGTACCACGTCGGTCTTGGCAGTCGAAATTCACAAGGGTTTGGAATGTTTCGCCTCGCAAGTGGATAAACCAGCCGCAAGATTGTCGTCGACCTCCAATCCTGCAAAAACCCCGGGGGATCGACGACAATAGTTTTTGGCGGCTCAGACTTACAGCCATCGAGGTTGAAGGTTATTGACAGAATTTTTGGAACTTGGTATACTGAAAACAGTGCTAGAGCGAAATGCTTGATACAACAAGCATTTTTGGG # Right flank : TTTGAAATAAAAGAATCATTCGAACCGGATGAGTAGGTACAGACTGTTGGGTTGCAGCCAAACCAAAAAAATGATGATGTCGATTCAACAAAGATATGGAAAAAATATTTGGGAATTTATCATCTCCCGCCGAGGAGACCCCCACTTCCACGCGTGAGCGTAGGTGGGAGAGCGTTCAATGTCCAAGCTTATGGTTCGTTTGGAGTTGTTTCCATCAGTTGGCTTTACATCATTCGGAAGTAAACGGAGGTTGCAATGCGCTCTAAACTTCGCGATCTCGGGTTTTCCATCGGCACGCTTCCAGTGGGGAAGCGGAATCAAATCACGGATGTGGCTGGGGTAAAGGTTGGGCATGCGACCATTCGGGAGGAACTGGATGAACGGACGGTGATCCGCACTGGGGTGACGGCGGTGTTGCCGCATGGGGGCAATTGGTTTTTGGAAAAGGTGCCCGCGGCTTGTTTTGTTTTGAACGGTTTTGGGAAAACGGTCGGGTTGGT # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 5 3089496-3091306 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061474.1 Geobacillus sp. 46C-IIa chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 3089496 36 100.0 29 .................................... AATATGTCTTGTATGTGTTGCTCGGTAAG 3089561 36 100.0 28 .................................... TACGGTACTGTTTGGAAACAAAGCTCGT 3089625 36 100.0 29 .................................... CGGCCAAGCGGCGGTTATCAACCGTGATT 3089690 36 100.0 29 .................................... TAAAGCGACCGGCGTACGTCATGATGTCA 3089755 36 100.0 29 .................................... GTCGAACTCGGCGTGAACCCGGCTGTTTG 3089820 36 100.0 29 .................................... GGTCGTTCCGTCCGTGCGAGTCGTCAACA 3089885 36 100.0 29 .................................... ACTCCGTCCGCCCAAAAGGTGAGCGTTTA 3089950 36 100.0 30 .................................... CCTTTCCGCGTGCTTCATGAAAACCTTGTA 3090016 36 100.0 30 .................................... GTGGGTTCGGGTGTTACTGGTAATATATAT 3090082 36 100.0 30 .................................... TCGTCGGAGGCGAATAGCAACCGAAACTAC 3090148 36 100.0 30 .................................... CGTCCCTGTCGTACGATTTGCGTACACCGG 3090214 36 100.0 30 .................................... ATTGATCTGCTCCTTTTGCTGTTCCTGATA 3090280 36 100.0 30 .................................... TACGAAGGCGGATGTTATCTAGTCGAGGTG 3090346 36 100.0 30 .................................... CTTATCGCCCCAAAAATCTTCTTCAGTAAT 3090412 36 100.0 30 .................................... TATTCCCATGCAGTGGGCATCCGTGCCAGA 3090478 36 100.0 30 .................................... AAAAAGACGAAGAAACCGACGAAAAAGATG 3090544 36 100.0 30 .................................... CCACTCACCGTCATGAAACATTTTACCGAA 3090610 36 100.0 30 .................................... GATGTTTTTGTAACGGTGAAACCAGAAACT 3090676 36 100.0 30 .................................... CGATGCCGGCGTCGCGTAAGTACGTGGCCA 3090742 36 100.0 30 .................................... CGATAATGTAAAGGTGTTCAACATTAAACG 3090808 36 97.2 30 ..............................G..... GAAGGGGACATTGTGGACGATGACGAAGCA 3090874 36 100.0 31 .................................... TTGAGCAATGATCTGATTGAACGGGAGCATT 3090941 36 100.0 30 .................................... GCAGAAAGGCCAGTAATTTCACGAACCCGC 3091007 36 100.0 30 .................................... CGTGCTTGTGCGCGATTGGCTTCGCGTACG 3091073 36 97.2 30 ..............................G..... CCGCGTCTACTGTTACCGTGCCGCCGATAA 3091139 36 100.0 30 .................................... TATCGAACGCTTCTTCTTCAGACAGCCACT 3091205 36 100.0 30 .................................... CGTACATCCAGACTGTCATCCGCGCATATG 3091271 36 97.2 0 ..............................G..... | ========== ====== ====== ====== ==================================== =============================== ================== 28 36 99.7 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : AAGCTTCGTCACTGCAAGCCGGAGCCAAGACCCTTCGTTGTTGAAATTGCCGGAACTTCTCCCGTTGCAACTGCACGTATATGAGTAAGTTTATGCGGTTGCTCGTCTTTTTTGATCTCCCCGTCGTGACCAACCGGGAGAAGCGTGAATACCGGCGATTTCGCACATTCCTACTGAACGAAGGGTATGATATGTTGCAGTTTTCAGTCTACAGCCGCGTCTGCCACGGACACGAAGCAACGGATAAACACTTGACAAGATTAAAACGCAACTTACCCCCTCAAGGATCGATTCGGGCGATGGTCGTAACGGAAAAGCAGTACGCAAAAATGCAGCTGCTTCTCGGGGAACCAACGGCACAAGAAAAGAAAATGACATCCACCCAGCTAACACTTTTTTAAAAAACGGAAAGGGTTCCCCCTTTTTGCATAAGCACATTTGCATTTTTTGAAAGCAAAAAAGCCTGCGATCCTTGAGATTGCAGGCTTTTTTGGATACGT # Right flank : CAAGAGCGGAGTTTATCGCCTCCATCCAGACATAAAAATCACGACTCACCAGTGTGATTTTCACGGAAAAAGCGGCTGAAATCGAACATCATGAAAAAAGGCGGTGGTTGACCGCCTTTTTGTTCTTTTCCTCTTACTCATTCAACGGGAAACACCGAGGTAAGATGGATATTCTGCCCCTTTTCTCTTACTCGCTCAGCAAGCGGCGAATTTCTTCTTCAGAAAGATCGACCAACCGGGCAATCTCGACGGCCGTCATCCCTTTTTGTGCCATCGTCTCAATGAGCCGCTTCATTCCTTGCTCAAGGCCGCGTTTCCATCCTTCTTCCATCCCTTCCTTCTTCCCTTTTTGCTCGTAGGAGATGATCAGCTCCAGCACTTTCTCTCTTTCTTTCGTTTCCATCGCCTTCACCTCGCTTTGCAGCTGTTGTTCCTCTTCCTCCGTCAACTTCACGTACGTCTCAAAAAACCCAAGCAGCAACCGCTGCCTCGCCTCATCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 6 3092594-3092434 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061474.1 Geobacillus sp. 46C-IIa chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 3092593 30 96.7 36 ............T................. CAGTTGATTACAGCCTATTTCGAAACGCTTGCTGCA 3092527 30 100.0 34 .............................. TACAAACAAGGGCTGCAAGTGAAAGGGATCGTTC 3092463 30 80.0 0 .....................A...TCTCA | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 92.2 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GCCACCCCAACGGTTCATTTGCCTCCGGAGCGGCTCGCCAAACTCGCCTCCGTAGCGTCAGCGTCGCTGCAGCCAGTGAAAGAAGCGATGGTGAAAACGGAAAAAGCGGGATACCAAGAGGCGATCATCGGCCGACTACTTCGAGACATAAAAAGTTAGCACTCGCCCCTGTTCATGCAAGCGTTGGGATTCCAATATTTGTGTTCGTCTTGCCCGCGGTGGATGAGCAGGCGGTATCTCGGTCTTATGCGCCGCAGGACGAGCGTTTGTCCTCGCTTAGGCAAACAGCAATCGGGAAACAAGGCAAGCCAGCCACCAGGAAGCACTCCTTGGTTGTCGTCGACCTCCAATCGCGCAAAAACCCTAGGGGGTCGACGACATTGGTTTTGATCGCTTAATCTCTAGAGCCATCATGAATGGGCTTGATTGACAGAATATTCGGGATGTTTTATGCTGAAGTTGCGGCTGCGGGAGAAAGCTTGTTATGGCAGCGGTTTTTG # Right flank : TTGTGAGCAGGATGCCGCCTTGGGGATGGCGAATAGAAGAAGAGAGACCATCAAGGTGAGGTGATCGAATGGCGATTGACCATGATCGGCTGTTCAAAGAGCTGATCCGCACGTTTTTCGAAGAGTTCTTCCTTCTCTTTTTCCCCGACATGCACGAGCATATCGATTTCCACCATCTGTCCTTTTTATCCGAAGAGCTGTTTACCGATGTGACGGCCGGCGAAAAGTACCGCGTCGATCTGCTGGTCGAGACGAAGCTGAAAGGCAAAGACGGGCTGATCATCGTGCACGTGGAAACGCAAGGGTATGTCCAGCCGTCGTTTGCCGAGCGCATGTTCCTCTATTTCAGCCGCTTGTATGAAACCTACCGAACCCGCATCGTTCCGATCGCTGTCTTCCATTATGATTCCCTCCGCGAGGAACCGTCTGTGTTTTCGATGGAATTTCCCTTTGGCGAAGTGCTGCAGTTTCGCTTTTTTCCGGTGGCGCTGCGGAAGAAG # Questionable array : NO Score: 6.78 # Score Detail : 1:0, 2:3, 3:3, 4:0.61, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //