Array 1 651183-656955 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFLN01000005.1 Fluviispira multicolorata strain 33A1-SZDP NODE_2_length_671308_cov_94.879289, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 651183 29 100.0 32 ............................. ATATTTATATTAACTGCGACAGTATAGCTAGA 651244 29 100.0 32 ............................. ATATTTTTATGCGAAATTTTACGCAAAAATCC 651305 29 100.0 32 ............................. CTGAATTAAGGCATAGTTTCTAATTCCAAGTT 651366 29 96.6 33 ............................A ACAACAGGAAAACCAAAAGGCTTGTTACATACA 651428 29 96.6 32 ............................C ATTTTATCCCCTTATATTTCCATTTTTTTGTT 651489 29 100.0 32 ............................. ATTGCGAGGTTGATTTCATGGAAAATAAACGA 651550 29 100.0 31 ............................. AAACACGAGTGGACGCACTGAACAATCTGAG G [651578] 651611 29 100.0 32 ............................. GTTGCAAGAATAACTGAACATATAGCCATAAT 651672 29 100.0 32 ............................. CGAGCTTTATTTGCATTAATTTTGCGCATCTA 651733 29 100.0 32 ............................. ATCTAAAAGCCAGTCGGGCGGAGGACGTCCTT 651794 29 100.0 32 ............................. AGTCAGCTGTTTTATGATTTCGTCCAAATCAA 651855 29 100.0 31 ............................. CGATTTGGCTTGACGTAGATGAGATGTTAGA G [651883] 651916 29 100.0 32 ............................. ATCTTTCTAAAAATAGAGATTTAACAGTTTTA 651977 29 100.0 32 ............................. TTTATCAATTACTTTCTAAATATGAAAATTGT 652038 29 100.0 30 ............................. AAATGAAGGTATACAACTCAGCACAATGAA CG [652065] 652099 29 100.0 32 ............................. GAAGTATATTTCCCAAATAATATTTTAACATT 652160 29 100.0 32 ............................. TTGTTAAAGAGTATATTTCTCATAAATAGTGT 652221 29 100.0 32 ............................. AAACTGCATACTGATACCCAATATCTCAGTTG 652282 29 100.0 32 ............................. TTTTATTAATTGATTTTGATCATCAATTAAAC 652343 29 100.0 32 ............................. AAGTGCCAATTAATGCACCGATTGTTTCTTTT 652404 29 100.0 32 ............................. ATTACTATATGATAAATAATGATATTGATTTT 652465 29 100.0 32 ............................. GTCATGACTCCCCACGAACCCATATATGAAGG 652526 29 100.0 32 ............................. GTGATGAGTAATCCCGAGAAATATATTGGCAG 652587 29 100.0 31 ............................. ATGTGTGGGAATCGACTTAGGATTCCACACA G [652615] 652648 29 100.0 32 ............................. AGATCGCAGATATAAAACCATGAAATATCATT 652709 29 100.0 32 ............................. CTCCAGCGTGGTTTGTAGCATTGCTTGAGCTT 652770 29 100.0 32 ............................. ATCCTTCTGTTTTAAAATTTGTCTCAAGATCC 652831 29 100.0 32 ............................. CATGTTTAAATCTGTCAAAGTTATTTTTCCTC 652892 29 100.0 32 ............................. GGGTTATTTCTCACATTTCATCGGGATATGAG 652953 29 100.0 32 ............................. CTGCCGAGTTTGAAGCGGATATTGTTTGGAAT 653014 29 100.0 33 ............................. ATGGTATAATTGAGGAAACAAATGGAGGTTATA 653076 29 100.0 32 ............................. TCTGGGGATTGATTGCGAAAGCAAAATGCGGC 653137 29 100.0 32 ............................. TTTTATTCAAAATATTCGAGATTTAAACTCGC 653198 29 100.0 32 ............................. TTAGGAAAGTCTGACGTAGTCAATGCACGTGT 653259 29 100.0 32 ............................. AGTTGAAAATCACAAAATCCGAAAAAAAAGAA 653320 29 100.0 32 ............................. TTGATGGTGTTGCAACAAATTTAATTGGTGAA 653381 29 100.0 32 ............................. CCCTTTCGGGTGCAATTACAAGCATGGGGACA 653442 29 93.1 32 ............GG............... TATTGAATCTTGTTCATAACCAGACAAATAAA 653503 29 93.1 32 ............GG............... TTGTCCTCTTCCTATATCTCCAAAAAAGACAC 653564 29 93.1 32 ............GG............... AAATTTCTGATAATAAAAATTCATTTTTTTCA 653625 29 93.1 31 ............GG............... TTTTTTTGTTGCGCTACTTTTGTAGATGAGG 653685 29 93.1 32 ............GG............... GTTGGACCTGAATAAAATGGAGAAACTATCAT 653746 29 93.1 32 ............GG............... TAATTGAAAATAATTTTTAATACTGAAAATAA 653807 29 93.1 32 ............GG............... AAAATTTAGAATTATACTTGAGTAGTATTCAG 653868 29 89.7 32 ............GG..............T CTATCCATATCTTTAAAAGTAAATCCACCAAG 653929 29 93.1 32 ............GG............... ATTTAAGTGGAGCCGTGGTAGCTTTCCACTTA 653990 29 93.1 32 ............GG............... CTATGATAATTCTTGGGAAGTTTCACACACAT 654051 29 93.1 33 ............GG............... CTTACTACCGCCCACATAAGGGGCGACCCTGAA 654113 29 89.7 32 ............GG..............A TGATTTAGAACCAGAAATCAAATTTAAATCGA 654174 29 93.1 32 ............GG............... TTTCGGCTTTATCAAAATATCCATTTACAGCA 654235 29 86.2 32 .......A....GG..............T CCCGTCTCCCCCTCTATTTGGTGCACGGTAAG 654296 29 93.1 32 ............GG............... CTTTTGCATCTGATACTTCAGCCAAGTACTTC 654357 29 93.1 32 ............GG............... TTCACCTGGGTTTTCTTTAAAGAAGAGCCTTC 654418 29 96.6 32 ............................T CTTTCGAGTCTTCGATTGCTTGGTACAGTGGG 654479 29 93.1 32 ............GG............... TATCAAAACATGAATATATAAACTCAAATGAG 654540 29 93.1 32 ............GG............... AACTGAGTTCAAACACTTGACTGATGATAATA 654601 29 93.1 32 ............GG............... ATGCGATTTAATATTTAAAAAAAGCAATGTTG 654662 29 93.1 32 ............GG............... TTATCTCATAAAAGACAGAGATACGATTAATA 654723 29 93.1 32 ............GG............... AAATGAATTAAAATGCAGTTCCTTCCTAAAAG 654784 29 93.1 32 ............GG............... GTATTGCAAGTGCATTGTGGCCAGATAAAAAT 654845 29 93.1 32 ............GG............... GAATACAAAATGACAACATTAGCGACAAAAAA 654906 29 89.7 32 ............GG..............C TTTCCTGTCTCAATTTTAAATTGAATATTTTC 654967 29 93.1 32 ............GG............... CTAGATTGTAATTCCTTTTTAGAGTTAATAAA 655028 29 93.1 32 ............GG............... AGCTAAAATGGATACCTTCAATAATTTAAAAA 655089 29 100.0 32 ............................. CTTTGGAAATATTTAATATTAAAAGGATTAAA 655150 29 100.0 32 ............................. CTCAGATCGAGCATTGATCATATGCGTCGTGA 655211 29 100.0 32 ............................. GCAAAAAATTATTTTGAGACAAAATATTTAAA 655272 29 96.6 31 ........................T.... TTTATTTCAGAACTTCCTTGTTTTTTGTATC 655332 29 96.6 33 .......A..................... TTAAACCATGCCATTATTTACGAATTAAAAAAA 655394 29 100.0 32 ............................. GGATTCATCAGAACGAATACCAACAAAACACG 655455 29 100.0 32 ............................. TTATCATTGATCGAGCTCCTTATTGGTACAGC 655516 29 100.0 32 ............................. ATTGACTATCACAAAGTACATAACTTTTTATC 655577 29 100.0 32 ............................. ATCTGAGTCAGTAATTAAAACTTTTCTAGCAT 655638 29 100.0 33 ............................. AATTTCAATTAGAGATTTAATAGACGAAATATC 655700 29 100.0 32 ............................. ATCTGAGTCAGTAATTAAAACTTTTCTAGCAT 655761 29 96.6 33 .A........................... AATTTCAATTAGAGATTTAATAGACGAAATATC 655823 29 100.0 33 ............................. TTTTCTTGAGCAGTATTAAATATATTGAATAAA 655885 29 100.0 32 ............................. CAAATGCCTTATTGTGGATCCAAGGGGTCAGT 655946 29 100.0 32 ............................. ATTTAAATAATTTCATATTAAATCCTGACGTA 656007 29 100.0 32 ............................. TATAAGAAATAATAACGAAAAATAGGAATAAA 656068 29 100.0 31 ............................. ATATTTCAGGGTTTGAAAATACCAGGGAAAG G [656096] 656129 29 100.0 32 ............................. TAATGAAAGAAAGAGTTCGTATTGGAAAAATT 656190 29 100.0 32 ............................. TAATGAAAGAAAGAGTTCGTATTGGAAAAATT 656251 29 96.6 32 ............................A TTTAAATCACTCAAAAGCAAAAATGCAAATTC 656312 29 100.0 32 ............................. GTGACAGACCATCAAATAAAAATCAGATTACC 656373 29 100.0 32 ............................. CAATTGATCGACGAAATTTAAAAAAAAGTGGC 656434 29 100.0 32 ............................. GTACAGAAAATACAAATCATTCTGAAAATCAA 656495 29 93.1 32 ............GG............... TTCGGGATTTAGATTTAAGTGGAAAGCTGCCT 656556 29 93.1 32 ............GG............... AATTTTTTTATATCGTATAGAATTTTGTCGAA 656617 29 93.1 32 ............GG............... TATTTATGAGATATTGAATGAGTGTCTATTAC 656678 29 100.0 34 ............................. GTCTGTGGTTATACTGACACTGGTCTACTGCGGC 656741 29 96.6 33 .............T............... CTTTGACGGACTAATATCAAGTTTTCTTACTAA 656803 29 100.0 34 ............................. GTCTGTGGTTATACTGACACTGGTCTACTGCGGC 656866 29 100.0 32 ............................. AGTAGGTGCTAGTTCTGGAAATAAAAAAACAG 656927 29 75.9 0 ............GG........AA..TTC | ========== ====== ====== ====== ============================= ================================== ================== 95 29 97.2 32 AGTTTCCCTACGCCCGTAGGGATGATCCG # Left flank : GAATTGTTGAAGATATTCAAGAACTCATGGATCATGATAGCTCACAGCATTCACCATTCGATTCCGATCCTGCAAAACCTGGTTTTTTATTAGGCGAAGAATCAATTTCTCAGGGTGGCAAAAATCATGGTGGTGATCATTCTTGAGTGTGTTCCTGTAAGTTTACGAGGTGAATTGAGTAAGTGGTTGATTGAGCCTAAAGCTGGAGTTTTTGTTGGAAAAATATCAGCTTTGGTAAGAGAAAATATCTGGAACAAATGCCAAGAAGAAGCTAAAGGAGGGAGTGGGGTATTGCTTTATTCAATGAATAACGAACAAGGCTATTCACTCGTGTCCTTTGGCGATGCAAGAAGGCAAATTGTTGATTTTGAGGGACTTTCTTTAATTCGATTCAATGAAAAGTAGGTTATCTATGCTATTTGATAAAAGAATAGTCGTAAATTTATATTTTATAAGACATAAAATATAAAATATTTTGATAACTCTAATCTTATCATAAT # Right flank : CATTAAACTTTTTTCATCTGTTGGCAACAATCTATTCCCCTTTGTGACAGAGGTCATAATTTAATAGCTTGGTGCCCTTGCGGTAATTACTATTATTCAAATAGTAATTTATCTCATGATAATTTTAATTCCAATAGTCATAATAATAATTAACTTATTTTTATTTCGAACAAAGAATATTTTAATTATGTAAAAAATATTTTTTTATCTGTTACATTAGGCCTATTTTACTTAATTCCTCTTCCAAAATTAAAATATTCCGCAATAAAATAGCATTAAATTAATCAAAGAAATTAAATATTCTTAAAACTTATTTCTGATTATAGAACTCTCAATAATAATCCCTGAATTTTTCTTTTATCCAATCTTTTTTAATAGAGATTTGTAACTTAAAAAAAGAGTTTTTGATTGTACTTTAAAAATTTAATTACTTACAAAAAAATGCTTTTTTACCAAAAAATCGTCAAAATTTTGACATACTATTTTAGTAAAAACTCTCA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.94, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTCCCTACGCCCGTAGGGATGATCCG # Alternate repeat : AGTTTCCCTACGGGCGTAGGGATGATCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //