Array 1 11693-10761 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGOX01000002.1 Gardnerella vaginalis strain W11 2556926470, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 11692 36 100.0 28 .................................... ATAAGGAGTGAAAATGTCATTTGATGCT 11628 36 100.0 28 .................................... TGGCATGGGTGGATGGGTTTCCTCTTTC 11564 36 100.0 28 .................................... CATGATGTCGTTTGATGCTATCCGTATT 11500 36 100.0 28 .................................... CATGATGTCGTTTGATGCTATCCGTATT 11436 36 100.0 28 .................................... AAAAATGTCATTTGATGCTATACGCGTG 11372 36 100.0 28 .................................... ACTGGGCTAAGCGCAATAACTACGTAGT 11308 36 100.0 28 .................................... ACGTTTAAGCAAACAGAATATTCCAACC 11244 36 100.0 28 .................................... TAACGCGGTCTTTGCCGTATCGCACTGA 11180 36 100.0 28 .................................... ATATCGCCCATTGATAAAGGTGTGATGC 11116 36 100.0 28 .................................... CGGTCTTGGTAACTCCGTCGTCGCCTTG 11052 36 100.0 28 .................................... ATATCTTCCATTAATAAAAGTGTGATGC 10988 36 100.0 28 .................................... ATTCGAGTCTTTCAAAGCAATATGGCAA 10924 36 100.0 28 .................................... CAAAGCACACAAAGGACTTTGCACACAG 10860 36 100.0 28 .................................... CAAAGCACACAAAGGACTTTGCACACAG 10796 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 15 36 100.0 28 CAATTATATCAAGAATGGTAGAAGCTAATTTTCAAC # Left flank : TAATGGTTCTGGGCATACAATTCCTAGCGCCTTATCTGATTTAGCTCAATCATATGGTATTTATGTGGAAAAAGACGTGGAAGAATTTCAAGTACCACAATTCGTAAGGAGTGAATTATGAAAGTCGATGAGGACAGTGGTGGCATGTGGTGTTTAGTAATGTTTGATTTACCAGTGAAAACAAAAGTAGAGCGTCACGCTGCAACTGTATTTCGCAATATGCTGCTTGATATGGGGTACGCAATGGTGCAATTTTCTGTATATGTTCGTTATAGCCCCACTCAAACAGGAAATAGAACTTCAGTAAAAATAATTAAGGATAATCTTCCTCCACGTGGATCTATACGCATTTTACATGTCAGTGATCATCAATGGTCATCTGCACAACGTTATTACAATGCCAGGCAAGAAAAGAAAGAGGAGACTCCCGATATTGCTATGCTTTTTTAATCATAAAATGTCTTATAAAGGTTGGAATTCTACCATTCTTGACGATATAC # Right flank : GAATAAATAAAAACGGGGAAGCTAGAAAGCTTCCCCTGCAGTGATAATCATCAAAACTGCTGAGCAATCAAACTGGATAACAAGTCCAGTCTTATTGAAAATTAGCACTACAAATATATCATTTTTAAGAAATAAAAGACAAGTGATTTTTTAAGTTTTGTTAAAAGATTTGAAAAGTTAACATATCGATATATTCAATGAATGATGCAGTTGGAAATATTACTATTATTATGTTTAACATATATGCGTTTTTTAAAAAGTGCATTCCTAGAATGTATGTATGTACATAGATAGCATCCATATATTCATAATGGGAACGTTACTAATGCAGCGTTCCCATTATGTTTTTATAATATGCGACTTATCAGCGATTTACCAAATGTGTACGCGCTCGCTTGGATTGAGCCACATCTCGTCGCCTTCTTTAACGTCAAATGCATTGTAGAACAAGTCCACGTTGCGCGCAATGCCGTTAGTGCGGCACTCTGCAGGGGAGTGTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAATTATATCAAGAATGGTAGAAGCTAATTTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //