Array 1 279668-280804 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS499566.1 Intestinibacter bartlettii DSM 16795 Scfld_02_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================== ================== 279668 37 100.0 36 ..................................... TATACTATTTTTCCTATATGTTCCCACGTTGAACCT 279741 37 100.0 37 ..................................... GGATGTAAAAAATAAAATTGACTGTATAAATCCCATA 279815 37 100.0 37 ..................................... GCTAATACAACCTTTTGACCTTCACCAAAGCCACCTT 279889 37 100.0 38 ..................................... TATACATCTAATAGAAAATTAGCAGAAAAATGTGGGGT 279964 37 100.0 37 ..................................... TTAACACATTTCTCCATTAATATAATCAATATCTATA 280038 37 100.0 37 ..................................... AATACGCTTGTTTTTGCAATTCTCTATTATTTTCATA 280112 37 100.0 39 ..................................... GAAGCTACAGTAAAAGCATTAAGAGAAGGCACAGAAAAT 280188 37 100.0 36 ..................................... GAAGACTATACTGCGATAAAAATAAATACGCTAGAC 280261 37 100.0 37 ..................................... ACACTATAGAATTTGCTAAATACGATGCTGTTACAGA 280335 37 100.0 38 ..................................... TAATAATAAATGTTATAGCAATGGTAATGGATTTCAAG 280410 37 100.0 35 ..................................... TCATATTTCTTATAATGGTCCAAAATATAATTCCA 280482 37 100.0 37 ..................................... ACTGTTTCGTCCATGCTTGTAGCTTTTTGTAACTCGA 280556 37 100.0 37 ..................................... AGGAAAATGATAAGATAGCAGTTGACAAAATTGACAA 280630 37 94.6 56 ...........................AT........ TTAAATCATATATCATATATTGATTTTTGTTATTACAAGTGTTACACTTTTTTAAA 280723 37 91.9 9 A...........A.....G.................. TTAATCGAT Deletion [280769] 280769 35 86.5 0 ....T.T..-..-.......................T | T [280773] ========== ====== ====== ====== ===================================== ======================================================== ================== 16 37 98.3 36 GTAAAAGAATAAGTTCCAATAAAACAAGGATTAAAAC # Left flank : TTTGGGGGAAATAAAATGCAGGTAATACAAATAAAGGTTGAAATTTTAATAAAAGATATACAGCTAGGTAAAATCCAGGCAAGAGTATATTGAGTTATTTATTAAAAAAGGAAAATATAGATACTTACAATAAGGACTCTTGACTCTTACTTAGCTGAATTATTTTCAAATTTATTGATATATATACATACTTTATTAAAATATGATTTAGCTAAATATATTTATAAAAAATCTGTGTATTTTTTATAAATAGTATGATACTCTATAATTAGATATAAAAATTTTCAAAAGTTTTTTTGATTAATAATTTTGTTTGTTATTGTAAAATTATTTAAAAAATATAATCCTAATCTATATATCCATTGATATAACTTGATTTGGAGTTGGTGTTGATAACAAAAAATTGACTTATTTTGTTTAAAAACAAGATGGTTTTTAATAAGTTTAAAAATTATATAATCGCTACAAACTAGTTATTTCAATGTGTTTAGGTGTTACGA # Right flank : TTTAAAAACATTTATTGACATATAATAACAATAGGACTATTATCTAAATATAAGGTTTTATTAATATATGTAATTATTAATATCCTTTGCAGGAGGTGATTATTTGATAGAGCAAATAAAAAATATAGGTCATGAAGTGAGAATTATAGATGGTGAGAAGGATTTAGTTGAATTATGGACTAAAGACACGAAACCGATGGATAATGTGATCTTCATAAATATAGATGAAGGAGAAAGAAAAGTCACCAAGGAGTTAAGAAGTTTTTACAGAGATGTTTATAAAGATGCATTAATTTATCAACAAGGAAATGGACATGTTGGGGCAGGAATAAAAATAGAAAAATATAAAGATAAAGATGCAGCAAAGATAAAAGAAAAAAAATTAGCAAGTTCTTTAGAGTTTATGGAAATAGACAAAAGTTATCTAGATGAAGTTTGGGTAAATATAATCGAGGAAGTTCAAAAAGATGCAAATCAATCGTATTTTATTATAATCACAA # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAAAGAATAAGTTCCAATAAAACAAGGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 288227-287374 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS499566.1 Intestinibacter bartlettii DSM 16795 Scfld_02_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 288226 37 91.9 37 A.C.A................................ ATATATTATTAGAAAGTACAAAAACTTATACTTGGCC 288152 37 100.0 37 ..................................... GGCAAGATGAATATGAGAGAAGCTATTGATATGGCAA 288078 37 100.0 37 ..................................... TGGTTAGAAGAATATGATTATCATGAAGTAGAACCTC 288004 37 100.0 37 ..................................... ACGTGTCAAGTTTTTCTTTATTTTCACAAACTTTTAT 287930 37 100.0 38 ..................................... AAGTCACCAGCTTGATTTGCTTGCATGCCAAGTGCAGT 287855 37 100.0 37 ..................................... GCATCTTAGTAGCTAACCAACTCATACTTTCTCCATA 287781 37 100.0 38 ..................................... CTTGTTCTACTAAAAAAGAATTTAATTTCAGATATAAA 287706 37 100.0 37 ..................................... CATTATTAATATTTCCACTTTCTATATTTGTTAATTT 287632 37 100.0 37 ..................................... TTGCGTAACTTGTTTTAGTTACTCCTAATACTTTTGC 287558 37 100.0 36 ..................................... ATTGATATATGGCAACAACAAAATTAGCAGATATTA 287485 37 100.0 38 ..................................... AACAGCGATTTGTAAAAGAAATGTTACTCGGCAAAGCA 287410 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 12 37 99.3 37 GTTTTAATCCTTGTTTTAATGGAACTTACTCTTTAAC # Left flank : ATTTCAATTTTTCTATTATCTCTTCTATTTCATAGATAATTCATTTAAAAATTCAACCTGATTAGTCATCTTTTGAGTCAAAAACTCTTTTACTAAAATTGTACCCATTTTATTAGAATCTAAATTTAACTGTCTTTTTCTAATAGTACTTATGCTACCAACTTTAGAATGCCATACTCTTCCAAAAGGTTTTCCATACTTTTTTAAAAACACTATATCAATATTATTCTCAACAGCTAACTCAATAGCATCAGTAGACAAAGCTGTAGATGTCGTTATAATTATTTGTTCAACCTTCTTAGCAGCAATTTCTTGTTTCTGCCCCTCTTTTTTCAAACAAAAACATTCGCCTACTTTAGTCAAATATACTCCTTCCGAATTAACAACTAGCTTCATAGCTTAATATCACCTTCTTTAGTTTTTATATTACTTAATTTTATTATTTCTGCTAGTATATGACAAATTCCTTCTTAAATTTCAATATATTTTTATTTTTTACT # Right flank : TCGTAGAACCTAAAACCATTGGAATTACTGATTTTCAATGTATTGCTTTATTTTCATCTAACCTCAAAACAATGATTTCCCATTAAAAAAATGTATTTTTTAGCTTATTAACATCTATCTCAAACCAAGTAATTCCAATACATTCAATTGTCAAAGTTCAAAGTTTCCAATAATTTTGTAGGAACAAAACTATTAAAAATCTATTTTATATCTTTTTTACAGTTCCAAATCCTCTCGATATTCCTTTACCTATCGCAAAATTATCTGGTATTTCAAAGTTTATAAAAAACTCTCCTATAAAAGCTAACATTTCTTTTTGTTTAAATTTAACATCTATTTGATTTAAGTCTAACTTTACTTTTATAGTTTCGTCAACTGTATAATCCATTCCTTTTGAAAAAGACAAAATATTTCCTATAAGTACTCTTTTTAGTATTTCTTCTTTTTCTATTAAATCTGCTGCTGTATATTTTTTAATATTATTTTGATTTAAAGCTAAC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCCTTGTTTTAATGGAACTTACTCTTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //