Array 1 258772-261740 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039374.2 Halomonas titanicae strain ANRCS81 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 258772 28 100.0 32 ............................ TAGTGATGAGGTGCCTATCGTGATGGGTGATT 258832 28 100.0 32 ............................ ATCAGAAAAATCGCTGACGAAATTCAAGGCCA 258892 28 100.0 32 ............................ ATCGTCAACGAGATATCGGCCTCGCCCAAAAC 258952 28 100.0 32 ............................ AAGCTGGCCAAGGCGTATGACGGCAAGCTAGC 259012 28 100.0 32 ............................ ATTGTTCTTGAGCCAGCCTCCTTGCCTGACAA 259072 28 100.0 32 ............................ TGCAGGCCAAAGATGGTATCGGCAGGGCACAT 259132 28 100.0 32 ............................ CAGATAAGCGCGCAGGGCAGAATGATGTCTGC 259192 28 100.0 32 ............................ TCTGACGCTAATGGTAATCATCAAAGGTGATA 259252 28 100.0 32 ............................ CCGAAAAGGTCAGACATGACACCAGTATCAGC 259312 28 100.0 32 ............................ ATGCTCAGGCCCAGAAATATCAGCGCGATTGC 259372 28 100.0 32 ............................ TTATCCATATCGTAGTCGCGCCAAAAGTGGCA 259432 28 100.0 32 ............................ TTTCAAGCAGATTCCGGTTGGCGGGGCGCCAT 259492 28 100.0 32 ............................ CCATCCTTCACAGTCAGGGCATTCCACAACGC 259552 28 100.0 32 ............................ TATGAAGGAGAGACGGCATGAAGATCCTGCAT 259612 28 100.0 32 ............................ CTAGCGCGACAGACGGGCACGGTCGGGGCCAA 259672 28 100.0 32 ............................ AATTTGAGGTCATCAACACGCAGCGTCACCAC 259732 28 100.0 32 ............................ GACAATGGAGAGTCTTCAGAATCAGCCGCCAG 259792 28 100.0 32 ............................ CGAAGCTCCACAGTTTGTTCAAGTTCATTCCT 259852 28 100.0 32 ............................ TCCCCCTGGGAAATTCTCGTACATAGGCGAAT 259912 28 100.0 32 ............................ GGGACGCGATACGCGAATATACCGGCCCGGTG 259972 28 100.0 32 ............................ GTAAGTGTTAATGATGAGTTAGCCGTAGTGCC 260032 28 100.0 32 ............................ ATGCCAAAAATTTAATTTGCATAGTTAACTCC 260092 28 100.0 32 ............................ AGCCACATTTTCAAGTCCCAGCTACTCAATTG 260152 28 100.0 32 ............................ AGATAGAAACGGCTTCTATTGACGAACCCATC 260212 28 100.0 32 ............................ ACTGTGGCCGACATGGCCGATGCCTACATCCA 260272 28 100.0 32 ............................ GTATTGAGGTGCAAGAGCGGCCTGTGAATATG 260332 28 100.0 32 ............................ TCATCCAGATAGGTGGCAAACTTCGCTACCCC 260392 28 100.0 32 ............................ GCTGGAAAATGACGGCGATGCGTTTCGGTTGG 260452 28 100.0 32 ............................ TAGGGCATCGGCTCCTTTGGCTGCCCCGCTGA 260512 28 100.0 32 ............................ ATGAATGACGTAGTTCGCAAGGGCGACACCGT 260572 28 100.0 32 ............................ ACTCAAGAATGCGGTCAACGGCCTGACCTAAC 260632 28 100.0 32 ............................ TGCTTCTGCGAGCAGTGATGCGTAAGTGTGAC 260692 28 100.0 32 ............................ AGTAGGCCACGCATCCGGCGTTGGTGTGTGCC 260752 28 92.9 32 ..GC........................ AAATGGTCGGGGCTTTTTGCGTTTTGGCGGAG 260812 28 92.9 32 ..GC........................ GTGCGGGGGAGTCGTCACTGGGCAGGGCTGGC 260872 28 92.9 32 ..GC........................ TATGTTCGCTTAATCTTTGGCGTGGCCAAACG 260932 28 92.9 32 ..GC........................ ACCCACGGCTATCGGCCCATTTGTCGATGCGC 260992 28 92.9 32 ..GC........................ CGCGATAGAACTCTACGGGACTAACTCGTACA 261052 28 92.9 32 ..GC........................ AAAGGCTGCGCCAAGGGCTGGGAAGCAATCAA 261112 28 92.9 32 ..GC........................ ATAGGCGAGATGATCTGCTGTTTAGCCGATCA 261172 28 92.9 32 ..GC........................ ATATCGTCACGCGCACGATCTAGGTCGCTCGT 261232 28 92.9 32 ..GC........................ TACAGGTATCGCCATGGCATTGCCGCCTGGGA 261292 28 92.9 32 ..GC........................ GCTGGCGCAGGCATGGCGGGAGGATACCTTGG 261352 28 92.9 32 ..GC........................ TTGAAGTAGAGGAATTTTAAATGCCTTATCCG 261412 28 92.9 32 ..GC........................ GTGCCAAACGTCGTCAGCCGATAGGCAAACCC 261472 28 85.7 32 ...C.......TG....T.......... ATCAGGCTCAGGTTCTCGGAATTCGTACTGTT 261532 28 89.3 32 ...C.......TG............... AGGGTGACTTAATCGATGCGATGAAGAACCCT 261592 28 89.3 32 ...C.......TG............... GCTGTCTGGATCGAGCTTTTTGTAAAGGCGTG 261652 28 89.3 33 ...C.......TG............... ATTCTGATGGATGCTTGGCACCCTTGCTTAGGT 261713 28 85.7 0 ..GC........T........C...... | ========== ====== ====== ====== ============================ ================================= ================== 50 28 97.1 32 GTTAGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CACGGCTGGGGCAATTGATGGGCGCTGACTGGCTAACCGGCATGCGTGATCACACCCAAGTCAGCGAGCTGCTTGCCGTGCCCGCTAATGCACAGCACTTCAACGTCGCGCGCAAGCAGTTCAATACGGGCAGCCCAAGCCGTGCCAAACGCTATGCCAAGCGGCATGACATTTCGGAAGATGAAGCGCAGCAGATTTATGCCAAGCTAGCGGCGCGGCGCATTGAGCTACCCTTCGTGCAAATAAACAGCCGCTCCACCCAGCAGCGCTTTAGCCTGTTTATTGAACACGGCAAGCCTCAGGAAAAACCGGTGGCGGGTTCGTTTAATCACTATGGCTTAAGCCCTGACGCCACAGTGCCGTGGTTTTGACCCTTTTTTCTAACATGAAAATAGGCGACCAATAATCAATCACTTAGCGGTGTCGCTCGAAAAAGGGTGATACCGCTTTTTTTGGCTAAAGCTCTTTAACAATCAGTAGATTAAATTTGATATGCTCTA # Right flank : AGCTCCAAAAAAACTCAAGGTAATGCGGGATATTGAGTTTATTGCTGGCTCAGTATCGTACTTCATCCCTGAATAGCTGAACCTTTTCTTAATTAAAATTGATAGCATAGGAGCATTCTTTAAAAAGGGATTTCCACTTATGCACTCGTTGAATAAAGCCATTGTTCTCGCCGCCGCGATTACTCTGGCGCCTCCTATACTGGGTCAGCCAGTGAAGGCAGGAACCGAGGCCTATAACAATGGTGATTACGCCACCGCTCTGAAGTATTTGGAGCCGTTGGCTGAACAAGGCGATGCCGACGCGCAGTACACTCTTGGCGTCATGTACGACCTCGGCGAGGGAGTCACCCAGAACGCCTCAACAGCCGCCGAGTGGTACCGAAAAGCCGCCGAACAGGGCGATGCCGACGCGCAGCTAAGTCTTGGCCTCATGTATGAATACGGCGAAGGAGTTCCCCAGAGCACCTCAACGGCCGCTGAGCAGGGCAATGCCATCGCTC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //