Array 1 1575-49 **** Predicted by CRISPRDetect 2.4 *** >NZ_JEWW01000039.1 Acinetobacter sp. 230853 ab230853.contig.38_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1574 26 89.3 32 --..........T............... GTATTGCAACAAAAGTTGAATCAAACGGAGAT 1516 28 96.4 32 ............T............... TGTTTCGTCATGTACTCCGCTTTTTGATAATG 1456 28 96.4 32 ............T............... AGATGAAGCTAACTGATCTAAAGTTGCAGCAT 1396 28 96.4 32 ............T............... TCCAGTTGAGTGTCCACCGCAAGGTTATCCGT 1336 28 96.4 32 ............T............... TACATCTGCTAAAGCAGCCTGAAGCATTGCTA 1276 28 96.4 32 ............T............... ATCTATCGCTAGAACTTCACCATCTTGCGTGT 1216 28 96.4 32 ............T............... TTGCCACTCAACTTCGGGACGGTGAAACCAGA 1156 28 100.0 32 ............................ TTGCCACTCAACTTCGGGACGGTGAAACCAGA 1096 28 100.0 32 ............................ TCTCTTGCGCTGTCATTCGCGCCGTATTACGC 1036 28 100.0 32 ............................ ATCAGCCGGATAGACACTAGAATCCAGACTGG 976 28 100.0 32 ............................ ATGGGCGACATGAAAGCGGCTGAGCGTCGATT 916 28 100.0 32 ............................ ACTTTGTGGGATCGAGTCAAGGATGGAATTAT 856 28 100.0 32 ............................ CTGCTGATCGGCTTCATGATTGTCTGGCTGAA 796 28 100.0 32 ............................ TACATCGACCAGTTTGAGATTGAGCGCATTAA 736 28 100.0 32 ............................ TGTTAATGCAATGGTTAGCGTTGACGATCTAA 676 28 100.0 32 ............................ CAAACGGGTCTTTTTTTATGCCCGCAGTTTGT 616 28 100.0 32 ............................ CTGCTGAGTATATGCAATATAGCGCCCGTTCT 556 28 100.0 32 ............................ ATTCAAGATAATTCTCAGGATTTTGACCAAAT 496 28 100.0 32 ............................ ATTGGCATCAAGTGTAGCTATGCCATTTGCTA 436 28 100.0 32 ............................ TTGACGGTTCAACTGTTCCAGTGGCGCTTTCT 376 28 100.0 32 ............................ ATTATTGCGCTTTGGCATCTTCTATTCTTTCC 316 28 96.4 32 A........................... AAGCCGGGTTATTGGTGTATGTGCGTTTGAAG 256 28 100.0 32 ............................ AATGTATATCCTGAATTTGGGCCGCCTAAACC 196 28 100.0 32 ............................ CAGGTCCGCGACTGAATCCAAGTTAGAACCGG 136 28 100.0 32 ............................ ATCTATTCCGACACTTGCACTTGAACTAACAT 76 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 26 28 98.6 32 GTTCGTCATCGCCTAGATGATTTAGAAA # Left flank : | # Right flank : ATTCTCATACCCGCCCAACTGTTCAATCAGATTGTTCGTCATCGCCTAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCTAGATGATTTAGAAA # Alternate repeat : GTTCGTCATCGCTTAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 60040-55990 **** Predicted by CRISPRDetect 2.4 *** >NZ_JEWW01000012.1 Acinetobacter sp. 230853 ab230853.contig.11_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 60039 28 96.4 32 ............T............... AAAATGCCTGGGAATATGAAAACTCACCGACA 59979 28 96.4 32 ............T............... AATGATGGTGTAAAGCATGTTGAATTCCGCAT 59919 28 96.4 32 ............T............... AGCATTCGCCTAAGGAACCCCCATGAGCAAAG 59859 28 96.4 32 ............T............... TAAATTGATATTGCTCACATATAAGTAGCGCT 59799 28 96.4 32 ............T............... AACTTCATACCCAGCTCCGCAATAATGCTAAA 59739 28 96.4 32 ............T............... AAGTCCTAATAAAATGCGAATTGAAATAGGAA 59679 28 96.4 32 ............T............... TAACAAGACGAGAGAATTTTATCACAGAAAAC 59619 28 96.4 32 ............T............... TTGCTAAAGCGATACAGATCACGAACAGAATG 59559 28 96.4 32 ............T............... TGAATGCTCGAAATGGTTTGATGATATTTCAA 59499 28 96.4 32 ............T............... GATACCTTTGAAAGTTGATCTTTTAAACAAAC 59439 28 96.4 32 ............T............... TATAACCCCCGATAAATCAGTTCCAGAACCGC 59379 28 96.4 32 ............T............... GTATTGCAACAAAAGTTGAATCAAACGGAGAT 59319 28 96.4 32 ............T............... TGTTTCGTCATGTACTCCGCTTTTTGATAATG 59259 28 96.4 32 ............T............... AGATGAAGCTAACTGATCTAAAGTTGCAGCAT 59199 28 96.4 32 ............T............... TCCAGTTGAGTGTCCACCGCAAGGTTATCCGT 59139 28 96.4 32 ............T............... TACATCTGCTAAAGCAGCCTGAAGCATTGCTA 59079 28 96.4 32 ............T............... ATCTATCGCTAGAACTTCACCATCTTGCGTGT 59019 28 96.4 32 ............T............... TTGCCACTCAACTTCGGGACGGTGAAACCAGA 58959 28 100.0 32 ............................ TTGCCACTCAACTTCGGGACGGTGAAACCAGA 58899 28 100.0 32 ............................ TTGCCACTCAACTTCGGGACGGTGAAACCAGA 58839 28 100.0 32 ............................ TTGCCACTCAACTTCGGGACGGTGAAACCAGA 58779 28 100.0 32 ............................ TCTCTTGCGCTGTCATTCGCGCCGTATTACGC 58719 28 100.0 32 ............................ ATCAGCCGGATAGACACTAGAATCCAGACTGG 58659 28 100.0 32 ............................ ATGGGCGACATGAAAGCGGCTGAGCGTCGATT 58599 28 100.0 32 ............................ ACTTTGTGGGATCGAGTCAAGGATGGAATTAT 58539 28 100.0 32 ............................ CTGCTGATCGGCTTCATGATTGTCTGGCTGAA 58479 28 100.0 32 ............................ TACATCGACCAGTTTGAGATTGAGCGCATTAA 58419 28 100.0 32 ............................ TGTTAATGCAATGGTTAGCGTTGACGATCTAA 58359 28 100.0 32 ............................ CAAACGGGTCTTTTTTTATGCCCGCAGTTTGT 58299 28 100.0 32 ............................ CTGCTGAGTATATGCAATATAGCGCCCGTTCT 58239 28 100.0 32 ............................ ATTCAAGATAATTCTCAGGATTTTGACCAAAT 58179 28 100.0 32 ............................ ATTGGCATCAAGTGTAGCTATGCCATTTGCTA 58119 28 100.0 32 ............................ TTGACGGTTCAACTGTTCCAGTGGCGCTTTCT 58059 28 100.0 32 ............................ ATTATTGCGCTTTGGCATCTTCTATTCTTTCC 57999 28 96.4 32 A........................... AAGCCGGGTTATTGGTGTATGTGCGTTTGAAG 57939 28 100.0 32 ............................ AATGTATATCCTGAATTTGGGCCGCCTAAACC 57879 28 100.0 32 ............................ CAGGTCCGCGACTGAATCCAAGTTAGAACCGG 57819 28 100.0 32 ............................ ATCTATTCCGACACTTGCACTTGAACTAACAT 57759 28 100.0 32 ............................ TTCTCATACCCGCCCAACTGTTCAATCAGATT 57699 28 100.0 32 ............................ AAATACGCTTTAGACCAAGTGACGCACCCAAT 57639 28 100.0 32 ............................ TTCACGTCGCGGCAGTGAAATCGCGATTAACA 57579 28 100.0 32 ............................ TTCGGGCCACGCTCTAGTTTTTCTAAGCAGCA 57519 28 100.0 32 ............................ TCTCTTGTAATGGGTTTCATAATATAATATAG 57459 28 96.4 32 ............T............... ACAAATGTTGACCATTGAGCAGTATCCAGAAA 57399 28 92.9 32 ...T........T............... AGAAAATCAAAATAATCAGGTGCAAGCGGTTC 57339 28 92.9 32 ...T........T............... TGAGTATATTGAATTGCCATTACAAGCAAAGC 57279 28 96.4 32 ............T............... TTTAAAATTGCATCAAGTGACTTATATTTTTT 57219 28 96.4 32 ............T............... ACCAAAGCTTGTCTCTGTTCTACACTTGCCGC 57159 28 100.0 32 ............................ AGAGTCACCACACGTATGTAACGTGCCTGATG 57099 28 96.4 32 ............T............... AAGGTGAAACTATGGGACTAAGACCGTTCTTT 57039 28 92.9 32 ...T........T............... AAAAGATGAGCGGACCGGAAAGATTGGGCAGG 56979 28 100.0 32 ............................ TTGATGATTGCCTTTGATTGCAGTTTTTAGAG 56919 28 100.0 32 ............................ ACTTTCGGAATACTGCTGGGTCTGGGCAAAAA 56859 28 100.0 32 ............................ ACCATGCGACTGCACCGACTCATGACTCTCGA 56799 28 100.0 32 ............................ AAAGGTAGTTCAACAAAAGTCTGCCGAGCAGA 56739 28 100.0 32 ............................ TTCAAGTTTTGTTCTATCTGACTTCTTGAATA 56679 28 100.0 32 ............................ AAGATGACGTTTGGCTTCTTTCATCCAGCCCA 56619 28 96.4 32 ............T............... AATCAGTTGTTCAACAGCGACAGACAATGCAT 56559 28 92.9 32 ...T........T............... TTGGAAAGATCGGCAGTGAAAACCGCCGGGTC 56499 28 96.4 32 ...T........................ CATCATTGCAGCATTGGATCTGATATTGTCAA 56439 28 96.4 32 ............T............... GATATGCGCCGTTCGCCAGCTTCACGCTCTCC 56379 28 96.4 32 ............T............... TGAGTCTTTTAAGCCGGACATAGATATAATTG 56319 28 96.4 32 ............T............... TTGATCGTTAATTTCTGGCTGATCAGTATCGG 56259 28 100.0 32 ............................ TGCAGCTTTAGAAAGTTTATGATGTGTGTCAT 56199 28 92.9 32 ...T........T............... AGCTCATGACTTTCAACAAGGCGTTTTAGGTC 56139 28 92.9 33 ...T........T............... AGAACGCCACTAACATGACGATGAAAGCCCCCC 56078 28 92.9 32 ............T.........G..... TATTCCTTATCTTTCGGCTTGTCATCTATGAA 56018 28 71.4 0 ......T..TC.A..A..A.......TT | A [55992] ========== ====== ====== ====== ============================ ================================= ================== 68 28 97.4 32 GTTCGTCATCGCCTAGATGATTTAGAAA # Left flank : TCGTTGGGCCAAAACGTTATACAAGCAACTTGCTAAAGGCTTTGGTGTTGAGTTCATTCGCGATGAAGGAAAAAATTCTCATGATACTATTGCTGATATAGCCAACAGTTATCTCGATCATGGAAACTATATTGCCTACGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCTCTCCCTATTTTGCACGGTAAAACACGTCGTGGGGGTCTAGTCTTTGACCTAGCTGATCTAGTGAAAGATGCTTTTGTGATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACAAAGATATTTTAGATTACATGTTTGGCTTCATTACTGACATATGTAGTAAAATTAAATAAAATCATATAATTAAGTTTTATACTTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTCAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTAAAGAGGCATAGTAAAAACTTCTATAAACAATAAAATTATTAAAAACAGAATTATTGTTTAATAAATCATCCAATTTCATCTACATTATTAAATTAAAAAGGTATTATGAGCCGAAATATGTCAGAATTTGATTAATTTATGATGTTCATGAGAAAACTGGGTAAGTCTCTTGACCTGGACTTGAGAAAATTAATACTTTTATTAATCGTATTCTGCGTATCTACACTCTTCTTTGTATCTTTAGGCGTGAGTTATTTAATCGTAAAAAACCAGTTAATCAGCAACTCTTTAGCGATTAACTCGGAATATGCAAATAAAATTGCCCTTAATACAGACAATCATTTTCAAAATATATTAAAAGAACTCAAGTACAGTGCTCAATCTTTGGGGAAAGACTTTAACAGTTTTGCGTTAAGAGAAGCAGAAGTTAACCGTCTAAAATACCAGTCGGATCACTATAACAGTGTAGTCATTGGTGATGCTGAAGGCAGACTCA # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCTAGATGATTTAGAAA # Alternate repeat : GTTCGTCATCGCTTAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //