Array 1 224267-223048 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKUV010000012.1 Paenibacillus ihumii isolate MGYG-HGUT-01514, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 224266 29 100.0 36 ............................. GATGTAGGAAAACCTGTGTTTTCCGCTAAACCATGT 224201 29 100.0 35 ............................. ATTTTTTGGCGGCGTGCTACATGTGGGCGATTTTA 224137 29 100.0 38 ............................. ACGTTTACACAGTAGCGATAGGCGCACCCGATGAAACA 224070 29 100.0 37 ............................. CGATAAAGCGCGCAACGTGTGTCGGTGTGTAAAACGC 224004 29 100.0 37 ............................. TGGTACCATAAGCTATGGTTTATACCAGTGGTTTTTA 223938 29 100.0 38 ............................. ACCGAAATCGAGATTCAAAAAATATCAGAGGCGGATTT 223871 29 100.0 35 ............................. AATTATACCACCCGCAAAATGAGCAACGGGGTAGC 223807 29 100.0 39 ............................. TATCTCCCGGCTTTATGGTTGGTGGGATGGGATCGGCGT 223739 29 100.0 36 ............................. GTGCAAGCGCTAGGCGGTAATCTCGTTCAGCCTCGG 223674 29 100.0 36 ............................. TATCAAACGGCGGCAGCGTACCGCGCCTAATGCGAT 223609 29 100.0 38 ............................. TACAATCACGGCCAACATCGATGATGCAGCAGTATTTA 223542 29 100.0 36 ............................. GCAACATATTAATTGCCGATTCCCCGGCTGCTTCGG 223477 29 96.6 38 ...A......................... TTTGTAAGAGTGTTTACCCTCAGGCCCTCAGATGCTGT 223410 29 100.0 37 ............................. AAGCGAAAGCCGCGCTAATTGCGCAAGTTGAGGAGGG 223344 29 100.0 36 ............................. TCGGCTAGTGTAACGATAGCCTGTTTTGATTTTTGC 223279 29 100.0 38 ............................. TTGTAAATCCATCTGCTGGCCTGCGAGCGTCTGAACCC 223212 29 100.0 36 ............................. GTTGAAGATTTCATGAAAGCGGCACGGTTTGGTTTT 223147 29 96.6 38 ...............T............. CAATCACGTCCGTGACAGCAGTACTCTGGCTCAAAATC 223080 29 89.7 0 .............A......A..C..... | CC,GA [223052,223057] ========== ====== ====== ====== ============================= ======================================= ================== 19 29 99.1 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : AGCATGTCATTGGTGATGAAAAATATAAACCTTTTAAGGCATGGTGGTAGATAGACATGTTTGTAATTATCACATACGATATAGGAGAAAAAAGAGTGGGCAAAGTCTGTAAAAAACTCCGAGAATATTTGGATTGGACGCAGAACTCGGTATTTGAAGGTGAGATTACTAAAGGAAAACTAACGAAATGTTTAGCAGAATTACGTGAGATCATGGATGAAGAGGATTCAATATATTTGTATAAAGTAGAGAACCCAAAAGCGATTATAAAAGAGGTTATTGGAGAAGATCGCTCCTTCGACCGGTTATTTTTTTAAAACAATGAGAAAATGCATCGATCGATTATTTTGTCGAAATCCCTGTAGGCCTTGCCAGATAAGGATTAAGGGTGATTCACATACGAAATGAGAATTTCTCATTGTAGGTTCAATGCAAAATTGAAAAATGTTGTAGTTGGAAAACCTTGATATCATAAGGCTTTTGCCGTGCTAGAAGTCGGG # Right flank : AACTACCTTCATTCCAAAAAATATGTACTACCATATCCCCCGATTTACTCCACCGCGTAATTCAAGGCAGGTGGCACTACATTTGTGTGCTTATCGACTTGTTTAATCGGAGATCATGGGACATAGTGCAGGTCCAAGTAAGAATGCTGCTTTGATTTCGCTTGCCTTTGCTACAGTAGAGGACGATCTGCGTCATATTCAATAGTTTCATTCGGACCGCGGCAGTAAGTTTAAAAATGAAAAGAGGACAGCTTCTTGAGACCTTTGGATTGGTCGATCTCTCAGCATGAAGGGCTGTCCCTATGACAACGCTGTTGCAAAAGCCACGTACAAAATCATGAAAACGGAGTTCGTCCACCAGATGAGCTTTCAAAGCATGCATCATCTGGAATTGGAACAAACGATACGTCAACTACTTCAACAAGCATCGGATTTACGGAACACTGGGATACATGACGCCCGTTCAGTATCGTAAGGAAGCCCTTAAAAAAGCTGTCTGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 234166-233029 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKUV010000012.1 Paenibacillus ihumii isolate MGYG-HGUT-01514, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 234165 29 100.0 37 ............................. ACGATACGCGCAAACATTGTGATAAATGCGGTGAAAA 234099 29 100.0 37 ............................. TTAATCAAGTACTACGAGCAAGCCGCGGATCTCTTGG 234033 29 100.0 37 ............................. ACAGGAGAAGACCCCGACAAGACCAGTAGCGCTGAAT 233967 29 100.0 35 ............................. CAAGAAGGTGAATGGCTGGGAGGAACGAGAATCCC 233903 29 100.0 36 ............................. TACGTAACGGTTAAAGGCCAGGTTTATGTAACTGAC 233838 29 100.0 38 ............................. TACGTCGAGGGCGCGGGCGAGGCGCTGTTTGCGCAGAT 233771 29 100.0 38 ............................. AATTTATTGATGACAGCATGACGAATATTGTCGTATAA 233704 29 100.0 37 ............................. GTATATGAGTGCGTTCCCTTCCGTCCAACGTATCGCG 233638 29 100.0 38 ............................. CTCAAACAGTCCGAGCTGCGGAAAATATCTGCACTTAT 233571 29 100.0 36 ............................. TAATTTTTATCGTGCCGTCTACTTCTCAATTTCAAC 233506 29 100.0 36 ............................. TCGTTAATTAGTCCTTCTATCGCTTCACGTAGTTTC 233441 29 100.0 37 ............................. TGACTAAACAGGGTGAGATTAAGGGTGAGGTTAGAGA 233375 29 100.0 37 ............................. ATAACCGTAACTTCGGGGATTAAAGGGTACTCGGTAG 233309 29 100.0 36 ............................. AAGAATACACCGCCTACGGCAACCAGGAGCATTTTT 233244 29 100.0 36 ............................. TCTTTCATGTATTTATTGTGTTCGATCTGGCAACGA 233179 24 82.8 35 ..........-----.............. GTGTGTAATCTGTCAGCCTAGCTCCCGCCCGTATA 233120 29 100.0 34 ............................. CCGGTACCTGATGGTAAATAACAAGGAAGTCCGT 233057 29 79.3 0 ..............C..C....A..T.CA | ========== ====== ====== ====== ============================= ====================================== ================== 18 29 97.9 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : GGAAGCTGGAGCATTGGGACGACTTCAAGCACCGTGTTCAATTCGTCCCGGAGATCAATTGGGACATTCCGAAATCGTCGATCCTCGTGTTCGATAACAGCGGCGATCTGACCTCGGAGAAGGTTGATTCCGTGTATGAGTTTGTAAAGGCTACTAGCCGTTAAGCAGGATAACGCTGCCCTTTGGGGTGGCGTTTTTTTGTTGGAGCAAAGGAAGCTATAACTGGACAGATATGTATTTATTACGTACGATAATACCAAGACGATGGTAACTTACTCAGTTAGAAAGTGTAGTTAAAAATGATTTGTAAATGTGAGCAAAACAAAATAATGCAGTGACCGATTTTTTTGTCGAATCGGCAGCAGCCTTTGTCTAGTAAGGCTCTAAGCTGCTTATACGCTAGTGGCAAATTTCCAGACTAGAGGTTCGATGCAAAGTGAAGAATTGCTACCGGCAAAAAGGCTAGATATATCAAGGGTTCTATCTAATAAAGATCCGGG # Right flank : CTCAATTATCATGTATGAAACATTCTCTCCCTTAAAATCCCCAGAATTGTTGTAAATTGTAGTTTTTAGGTCTTGCCCTATGTCGATTAAAGTAGTAGATTGGAACTATATGTATTTGTTGTAAATTGGTGAATATGGAGGTGGAACATGAGACTATCAGTGACTTATCAGGTAGAGCGAGTGCCTCTAGGTTATCGAATGACAGTATTATCCTTGCTAAAAGAAGCGCTGAGACTAGCTAATGAAGCGTATTATAAAGAGCTTTATGAGCAACGATCGAAAGAAATGAAACCGTTTTCTACTGCGGTATTTCTCAAGGAATTTACGTATCATGAAGATGAAATCTTACTTAAAGAACTGTCAATTACGATAAGTTCAGCAGATATGGAATTTATGTTACATCTATTTAATGGACTACACCAACTTAGAAGCTATAAGACTGACGGTCAGGAGTGGAAGCAATTACGGATTCAAATGCTTAAAGAAGCTCAAGTTACAGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 1070085-1072386 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKUV010000012.1 Paenibacillus ihumii isolate MGYG-HGUT-01514, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 1070085 32 100.0 34 ................................ CAGGATTATGTTGACGCAGGGGTTTGGTGGGGAC 1070151 32 100.0 33 ................................ GCAAATAATAATACGTTACAAATTCTGGAGCGC 1070216 32 100.0 33 ................................ GAGAGTACCAGCTATACGCTTAAGAATTTGCAA 1070281 32 100.0 35 ................................ AAAAATCCACCTCCAAAGCAGCAAAAAAGGAGAGG 1070348 32 100.0 34 ................................ TGAACACTCTTCCAGCCACACAATGGAAATGTTG 1070414 32 100.0 34 ................................ AACAGCGGCAAAGCTTGAACATCCAGCTTTTACC 1070480 32 100.0 35 ................................ GTTGATAGGCCGACAATTACCCTGACGGATTTAGA 1070547 32 100.0 35 ................................ TTTAATTAATGGGGAACGAACATTTAAGACGTTTT 1070614 32 100.0 35 ................................ AGACATATTTCTACCTCCTTAAATAGACTAGGAAT 1070681 32 100.0 33 ................................ CAGATCCGTTATAGCTGCAGCATGCTCATCTAG 1070746 32 100.0 37 ................................ GCATCGAAGTTATTGCTTCCAGGCTCATACTTTGGCA 1070815 32 100.0 36 ................................ CATTGACGTGCAATAACTGGACGAAAATTGATAATA 1070883 32 100.0 33 ................................ TTCAAATGCTCCACGATCCGTTCCAATGCGTGA 1070948 32 100.0 35 ................................ CATATACACGTTATAGTCGTTTATGTCTTCATCGT 1071015 32 100.0 36 ................................ CTTTATCAAATCCAGCTCGTGCTGTACGAGAAAACA 1071083 32 100.0 34 ................................ ACCGATGTGGCTCTCAGACGCGGAAATATTGTAT 1071149 32 100.0 38 ................................ GTCGCGTCGATAACGTGGCCGGGGCGTAGTGTGACTTC 1071219 32 100.0 33 ................................ TGGAGACATATCTCTCCAGGAGTAAAAATTGTG 1071284 32 100.0 34 ................................ AAGCAGTCGGAACCGGAGCGCAATTTATATACGA 1071350 32 100.0 35 ................................ CTCGCGGTGAAAAAATGAATGCCGTGATGAGAGGG 1071417 32 100.0 35 ................................ AACCCGGGTCGTACAGGATTACTGTATCAGCATAC 1071484 32 100.0 37 ................................ AATCAAAGTCTGAATAAGGGTAAGAGAGAAGCCTCTG 1071553 32 100.0 36 ................................ TTCCCTCCCGATCTACTAATTAGCTTCTTAGCAAGC 1071621 32 100.0 35 ................................ GCAAAAGGCGATAAGGTACGGTTGGTGAGTGGAGG 1071688 32 100.0 36 ................................ GAGATATTCAGGCTCATTTTCTGGCTGATCAACTTA 1071756 32 100.0 32 ................................ GATGCCAAGCGAAAAAATAAATTGGGAGCCGT 1071820 32 96.9 33 ........T....................... CGTTTACGCAATATCCTCCACCTCCACATTTGC 1071885 32 100.0 35 ................................ TGCTACGGGTCCGAACTGGCGAGGCCGAGTCGAGA 1071952 32 100.0 34 ................................ CCAACGACTAAAGGCAACCAATGTATCAGTGGAT 1072018 32 100.0 36 ................................ AAGCGGGCGTGCGCGCTATCTCTATCCGCGGACGAA 1072086 32 100.0 35 ................................ TAATAATAAGGATGAAATTGGCGCAATAGAATTAC 1072153 32 100.0 37 ................................ TAATTGATGTAGGGAAACTCTTTTTTCATAATCTGCA 1072222 32 100.0 35 ................................ CGAGAAGGGATGCGAGTAGGCGAAAAAGAACGTCA 1072289 32 96.9 34 .............C.................. ATGATGACCATCTCAATGAAAGAGATCGAGCGAG 1072355 32 84.4 0 .............C......A..A...A...C | ========== ====== ====== ====== ================================ ====================================== ================== 35 32 99.4 35 GTCGCATCCCTCGTGGATGCGTGGATTGAAAT # Left flank : GATGAATATCCTCCATTTCTATGGAAGTAGGTGTGAGATATGCTAGTATTAATTACGTATGATGTAAGTACGGTGAGCGGTGCGGGGCAGCGCAGATTGCGAAGGGTATCCAAGGTATGCCAAAACTATGGACAGCGCGTACAAAATTCAGTATTTGAATGTGTGGTCGATGCCGCTCAATTTGCAACTCTAAAGCTAAAGCTTATGGACATTATCGATCCTGACCAGGATAGCCTCCGTTTCTATCAGCTCGGGAATAACTATCGGAATAAGGTTGAGCACATCGGTGTCAAAGAGTCACTAGATTTGGAAGGGCCCCTAATTTTGTAAGGTGCGAATGTGAAGCGAACATGATTCTCCAGGGACATTCGCACCAGATAATAAACTTTAATTATCTAAGATGGAAAAATATACATGACTAAAATTTGATATTATTACGATTATTAGCATAAAAGTTGTTTTATTTGCGTCTATAGCGTCAATATACGTTATAAATCGCA # Right flank : CAGAAACGGCTAACAAAAAACGTATGGAGGCTGTTGTAGCCTAACGCAGCATTTTAAAATTAGAATGAAGAAAAAACAAGGCGCTACTCATCCTGAGCAGCGCCTCCTTTGCGATATTGCAGGGGGGAAATTCCGGTGGTGCGTTTAAAGGCGGTGCTGAAATAATGCTGGGTTTCGTAGCCGACCTGCCTGGAGATCTCGGCGATGGTCAGGTCGGTGCCGTTCAGCAGCTGGGACGCCCGGCGAATGCGGATTTGTGTCAAATAGCTGTTGAACGAGGTATCCAGCTCCTGCTTGATCATTCGGCTCAAATATACCGGAGAAGATTGCAGCTGCTGGGCCATGGACTCCAGGGTCAGCGTGCAATCGCCGTAGTGCTCCAGCATATACTGCTTGGCTCTGCGCACCAGGGGGGAGACGGCGGTCTCCTTCAGCACGGCGGATTTGCATCTTCGGTAGGCGGACGGCATTGCGGTAACGTCCCCTTCTCCTTCGATTAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGTGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGTGTGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.90,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //