Array 1 181940-179290 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHTU01000005.1 Klebsiella pneumoniae strain KP_158 NODE_5_length_350104_cov_25.008794, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 181939 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 181878 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 181817 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 181756 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 181694 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 181633 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 181572 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 181511 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181450 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181389 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181328 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181267 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181206 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181145 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181084 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181023 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 180962 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 180901 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 180840 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 180779 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 180718 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 180657 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 180596 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 180535 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180474 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 180413 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180352 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180291 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180230 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180169 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180108 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180047 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 179986 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 179925 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 179864 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 179803 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 179742 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 179681 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 179620 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 179559 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 179498 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 179437 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179376 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179318 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //