Array 1 191506-195433 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKNL01000004.1 Klebsiella pneumoniae strain EuSCAPE_IT057, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 191506 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 191565 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 191626 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 191687 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 191748 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 191809 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 191870 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 191931 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 191992 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 192053 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 192114 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 192175 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 192236 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 192297 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 192358 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 192419 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 192480 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 192541 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 192602 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 192663 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 192724 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 192785 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 192846 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 192907 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 192968 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 193029 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 193090 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 193151 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 193212 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 193273 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 193334 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 193395 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 193456 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 193517 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 193578 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 193639 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 193700 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 193761 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 193822 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 193883 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 193944 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 194005 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 194066 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 194127 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 194188 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 194249 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 194310 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 194371 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 194432 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 194493 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 194554 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 194615 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 194676 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 194737 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 194798 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 194859 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 194920 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 194981 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 195042 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 195103 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 195164 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 195225 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 195286 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 195347 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 195405 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //