Array 1 97220-98346 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KB905013.1 Thioalkalivibrio sp. ALJ5 C937DRAFT_scaffold00004.4, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     97220	    29	 100.0	    32	.............................	GTAAAGGATGAACGTTTTGAGGTTGAGGCATC	
     97281	    29	 100.0	    32	.............................	AACGTTCCCGCGTCTGAGCCTGTCAGGCTGTC	
     97342	    29	 100.0	    32	.............................	GGAAGGCAGCGAGACAAGCCTAGAGATTGAAA	
     97403	    29	 100.0	    32	.............................	GTTTAGGTCATTGTCCTGTAGTTCGTGTTCCT	
     97464	    29	 100.0	    32	.............................	CACTTAGGCGACACGTTCGCCGGGTGCTGTCC	
     97525	    29	 100.0	    32	.............................	ACCTGTCCGGTGGCGAAGACAAGGCCGAAGCG	
     97586	    29	 100.0	    32	.............................	TGGGAGAGGAAGCTGGACGGGTTCCCGCCCGG	
     97647	    29	 100.0	    32	.............................	CTCGAGGGCGTTGGAACGGGCACGGTCGATTA	
     97708	    29	 100.0	    32	.............................	TGCGGCGATCGGCAGAAGCCCGATGGGAAGGC	
     97769	    29	 100.0	    32	.............................	TCGGCGTGGTTTCGATCGATGACTGGTCCCAG	
     97830	    29	 100.0	    32	.............................	AAGCCGCCCGGCCCGTCCTCGCCTTCATAGAA	
     97891	    29	 100.0	    32	.............................	TTCGCGCGGATGGTTTCGTTACGCGCCTTGGT	
     97952	    29	 100.0	    32	.............................	GTTGAGAAGCACGCCGACTTTCGGGTGATCGC	
     98013	    29	 100.0	    32	.............................	ACGGCCTCGAAATGCTGACGGGAGTGTAATCG	
     98074	    29	 100.0	    32	.............................	TACCAGACCACGGTCCCGTCCGTCAGCGAGTA	
     98135	    29	  96.6	    32	........A....................	CCCACTTCTGTGGCGGCTTCGTGGATGATGCC	
     98196	    29	 100.0	    32	.............................	GCTTGGGCCTTCGCCGGCATCCCCGACGCGGC	
     98257	    29	  96.6	    32	.................A...........	GAGACTACGATGCTTTTCTATCTGCTGCTGTT	
     98318	    29	  96.6	     0	A............................	|                               	
==========	======	======	======	=============================	================================	==================
        19	    29	  99.5	    32	GCGTTCCCCGCACCCGCGGGGATGAACCG	                                	       

# Left flank :   NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTG
# Right flank :  GCGCTCGTAGATGTGGGGCGACATGAAGGGACATCACTTCGTCAGCAACACTTATTTCAGTGAAAGCCATTTTCGTTTAGTACTTTAGAGTTAATACGAAACGACATCCGTCCCTCGTGTACCCAGTTCTGTACCACCGCGGCGCGGTGTGCACCCGCTTCATTCTGGGTATCGGCTCCAACTCCCGGGTCGATTGATGCATGATCGGTGCGACGACACGTCGCCGGCGAAGGAGCATTACGCATTGCCCTCGTCGGGGAAGTCCTGGTCGCGCTACTCCCGAGCTCCAGAAAGCGGAAGCCCGGCGCGGGACTGGGCTTGCGCGGTTTCATCGGTTCCTGGTCTCGGCGGTCCTGCGTCGCCATCTCGCGCCGCAAGGGTTCTAGCTCGGAGGGCATCAGCCGACGGGACGCGGACCCGGGCGAGGAATCGGGCTCCCGACTCCTTGAGCCGGTTGATCGGGTGCCTCCCCACCACTCTGAGGGTTCTTGGCCATCGCG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCGTTCCCCGCACCCGCGGGGATGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [3.3-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0.27   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//