Array 1 1009-49 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPYA01000206.1 Geobacillus icigianus strain G1w1 NODE_66, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1008 30 100.0 36 .............................. TGGGCCGTGCTCATCACGATCATGTTTCTCCGGTAC 942 30 100.0 38 .............................. ACTTAATGAAAATGCGAAACCCCAACAAAACCTTTACG 874 30 100.0 36 .............................. GGCCATAGGAGAATACCAAGAACGAAACCTAGAGAA 808 30 100.0 39 .............................. ATCTTCATCGTCCCACACCTCTTCAATTTTTCCATCAAG 739 30 100.0 39 .............................. AGAAAGCGCCGTTGGTTCCTCACGCAAAAAGGGATCGAA 670 30 100.0 35 .............................. TGAAGCCTGCCTTGCCGCCGGTGAAGAACCCATTG 605 30 100.0 34 .............................. AAACCTCCTTGGCTTTATTTGGGATTGCTTCCCC 541 30 100.0 35 .............................. GGGTGCGGCCTGTGTGCCCCGCACGCCGGCAACGC 476 30 100.0 36 .............................. TCCCGTTTGCATCCGTGATTTTGACTCCTAATCGTT 410 30 100.0 37 .............................. TTGATTGTGCGGAGTGTCGTTCCGTCAACTTTTTCTG 343 30 100.0 37 .............................. TATTGTCATTGGGCTGGTTTTTCTGTGTTGCAACGCC 276 30 100.0 36 .............................. TTCGGAGGATTGTCATAACTATGTTGTGCTACATAC 210 30 100.0 36 .............................. TCGTCGTTGGGTGGCGGATCGATATGATACATTGAG 144 30 100.0 36 .............................. GAAAGAGAGATTTAGAGCTTATTAAAAGGGAGGGAA 78 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 15 30 100.0 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CACCCCATCGGTTCACTTGCCTCCGGAGCGGCTCGCCAAACTCGCCTCCGTAGCGTCAACGCCGCTGCAGCCAGTGAAAGAAGCGATAGCGAAAACCGAAAAAGCGGGATACCAAGAGGCGATCATCAGCCGACTGCTTGGAGACATAAAAAGTTAGCACTCGCCCCCGTTCGTGCAAGTGTTGGGATTCCAATGTTTGTATTCGTCTTGCCCGCGATGGATGAGCAGGCGGCGCCCGGGTCTTATTCACCGCATGACGAGCGTTTACCCTCGCTTAGGCAAATAGCAATCGGCAAACAAGGCAAGTCAAACGCTAGGAAGCAGTCTTCATTTGTCGTCGACCTCCAATCGCGCAAAAACCCCAGGGGGTCGACGACATTGATTTTGATCGCTTGATCCCTACAACCATCAAGGAGAGATTTCATTGACAGAATCTTCGAAACGTGTTATTCTGATGATGACATTGAAGGGAAAAGGTTGATATGACAACACTTTTTGGG # Right flank : CATTGATGTTCTCTATTTTGTCGCTTCCGGGCTGGCTTCGTTTTTATCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 29-1249 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPYA01000167.1 Geobacillus icigianus strain G1w1 NODE_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 29 30 100.0 36 .............................. CTGAAAAAAACACAGCCACTGCATTGGCGCAGCTGG 95 30 100.0 35 .............................. TAGCCCACATCGTTTCAGCCCAATAAACTTCGCCA 160 30 100.0 37 .............................. AAAAAAATTTCTCCTGAAGTCGCAAAAGAAAAGCATT 227 30 100.0 36 .............................. ATGTATGTGTGTCGCTTCTGGACGGTTGCTGTTGAG 293 30 100.0 34 .............................. ATTTTGAGTCGCAGATGAATTCGTTCTTTCGTAA 357 30 100.0 36 .............................. ATGTTTTTGTAAAGATACTTCATCGTACCTAAATGC 423 30 100.0 36 .............................. ATCCTCAAACGCAAGTTGATGTAAATCAAAACGCAC 489 30 100.0 37 .............................. AATCTCGGGCCAAACCATTCATTCAACCGTCATCGAG 556 30 100.0 36 .............................. AGAAACGGCAGCGTTTCGTAAATTTGCCTAATGTCA 622 30 100.0 35 .............................. TGGAGCTAGCCGCTCCATAAGCCGCCCAACAATGT 687 30 100.0 35 .............................. GTCGAAATCGAGCGTCACGAGGACGAGATCACCGG 752 30 100.0 38 .............................. TTCTATGCTTCTCGTGCGCCATCACAATATTGATAGCG 820 30 100.0 39 .............................. CGTGATAGGTTTCGGTCGCGTAATTGTGCCAATATTCGA 889 30 100.0 34 .............................. ACAACAGCGAACCGATATGGTACGCTTGAGCCAA 953 30 100.0 36 .............................. CGTATCTGATAGACCTGTCCATTTGGCAGTTCCCCC 1019 30 100.0 36 .............................. ACGTGATGCGCGCCAAAATGGATCCGGGGTATCTCG 1085 30 100.0 39 .............................. AAAAAATCAAGGTTTCAAGGAGGATGTTTTGCTTCCTAC 1154 30 96.7 36 .................A............ ATTGTTCCAGTCGCTGAACAATCATCTGTTTCCGGC 1220 30 86.7 0 ....................A..CC.G... | ========== ====== ====== ====== ============================== ======================================= ================== 19 30 99.1 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTGATCGTTCCATTAACTTCGGTGGCGTG # Right flank : CGTCAGCGCACTATTTCGGCGGAAAGGTCCGTATTCCTCCGCTTTCTATCTGTTGTTTTCCTCTCCTATCTTCCTCGAAAAATTTTGCCCCACACTGGCTAGTTCAGCCCATTTTTTATGCGAAGTTTTTCGGGGGGCTGGTAAACAACAGCAGTTTCCCTTGAGCAATGGGTGAACGTGTGCAAAGAAGGAACGATGCTACAGTTTTTTCTATTGTTTGAGAGACGTTATTGAGAAGCGGCCTACTCCCTTAAATCACCAACCTTCCAAAATGTCTTTCCACAGTAGAAGATTCAAGGATTTGTTATGAATTTAAAAAAAATAATAAAATCACTTGCTTAAATTTTGGAAAATCACTTAAAATTGGTATAGAAATAGATATATTTTCCTAGTTTGCTCATGCTAGATGAGAATAGGGAGAGATTGGCTTGTATCAGCACATTGTATTGACATGCGGCGTTTCGTTATTGACGGGGGCTAGGAATGTCTTTTCGGTGAAT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 10556-11979 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPYA01000167.1 Geobacillus icigianus strain G1w1 NODE_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 10556 30 100.0 36 .............................. AAGAAGAAGCCGATGAGTACGGCAACGCCCGATATG 10622 30 100.0 39 .............................. GCATTATCGACATCATTGACCGACTCGCGCGTTACGAAG 10691 30 100.0 39 .............................. TCGTCCGACTACGCAGTAAACTCTTCTCCTGTAATTTCC 10760 30 100.0 35 .............................. CTCCGTTTTCATTTCCAAGTCCTACTTCTGTTTCA 10825 30 100.0 35 .............................. AGGGATCGCTCCCTTTATCGCCGGCATGAATGCAT 10890 30 100.0 36 .............................. ACGTTTCGCGACTTGATTAAAGGGATTTTGCACGGT 10956 30 100.0 35 .............................. CACGAGCGTTTTTCTCGCCATTGACGACATTGATT 11021 30 100.0 37 .............................. ATGGGCATTAGCAAAGTATTAAATAAGCCGTAGGATT 11088 30 100.0 36 .............................. AATTGTCATACAAATCTCTCCTTTTCATGATTGATT 11154 30 100.0 37 .............................. AATCATCCTCCCTATTTAATTTTCAATGTTCAATTGA 11221 30 100.0 36 .............................. CCAGCAAATTTTTTCATGAAATTGTTGCATTTTGTC 11287 30 100.0 35 .............................. TGCGTCGGAGCTGTGGCACAGTGACGGCGAGTAGC 11352 30 100.0 36 .............................. TCTAATCCGTATAGATAAATTGTGAAATCATCTTTC 11418 30 100.0 35 .............................. GGTTCATTCAAAATTAACTGGACTGTCCCCGGAAG 11483 30 100.0 38 .............................. CGGTAAACCTCGACGCGGTATTCGGGGAATTCGTTTTC 11551 30 100.0 35 .............................. ATTGTATGTGTTTCTGTTTTTTTGCTGGTTTTTGT 11616 30 100.0 36 .............................. TGCTAAGAGCACGATGATCTGGGATAAGCTCGTGAC 11682 30 100.0 36 .............................. CCCCTATGCCTGCCTCCCACGCACAGTGCTGATAGG 11748 30 100.0 38 .............................. AATGAAAGGAGAAATGCAAAATGGAAAAATTAGTTTGG 11816 30 100.0 36 .............................. CCCGATCCGCTTTAATACCAGTCATTGCGTCAGCCG 11882 30 100.0 37 .............................. AATACATCGCCGTGCGGGCGCGGAAGGTGGCGTAGTC 11949 30 76.7 0 ..........C..T.....C.A...TTT.. | C [11977] ========== ====== ====== ====== ============================== ======================================= ================== 22 30 98.9 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : ATGCGGCTTGAACAGCGGAAAAAAGAGCAGGCATTGCTGGAACAGCGGAAGCGCGAGGAAGAAGAACAAGCAAAACTTGCCCTGCTTTCCCCAGAAGAACGGCTTGTCGCTGAAATCGTGCAGCTCACCGACAGCCAAGCCGATCAACAGCGCAGCAAAGACGCTCTGTATAACCAAGTCATCCAACAACAAAACAAACAAGCCGCCCAAGCGCTGCTTGCGTATTGGCAACGGATCGGCCAATGGGGAAAAAGCGCCAGCAAAAAGCAAAAAGAAAAAATCAACGTCCTTCAACAGCTGCTTAACGGCTCATAACCAAACCGCCTTTCGTTTGTCGTCGACCTCCAATTGTGCAAAAACCCTAGGGGGTCGACGACATTGGCTCTGATCGCCTGATCTCTACAGTCATCAAGAATAGATTTCATTGACAGAATCTTCGAAACGTGTTATTCTGGTGATGACATTGAAGAGAAAAGGTTGATATGACAACACTTTTTGGG # Right flank : CTGTGAGCAGGATGTTGCCTTGGGGACGGCGAATAGAAAAAGAGAGACCGTCAAGTTGAGGTGATTGAATGGCGATTGACCATGATCGGTTGTTCAAAGAGCTGATCCGCACGTTTTTCGAAGAGTTTCTGCTCCTCTTTTTCCCCGATATGCACGAGCATATCGATTTCCACCATCTGTCCTTTTTATCCGAAGAGCTGTTTACCGATGTGACGGCCGGTGAAAAGTACCGCGTTGATTTGCTGGTCGAGACGAAGCTGAAAGGCGAAGACGGGCTGATCATCGTGCACGTGGAAACGCAAGGGTATGTCCAGCCGTCGTTTGCCGAGCGCATGTTCCTCTATTTCAGCCGCTTGTATGAAAGTTACCGGACCCGCATCGTTCCGATCGCCGTCTTCCACTATGATTCCCTCCGCGAGGAACCGTCTGTGTTTTCGATGGAATTTCCGTTTGGGGAAGTGCTGCATTCCGGTGGCGTTGCGGAAGAAGCAGTGGCGGGA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 22135-22703 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPYA01000167.1 Geobacillus icigianus strain G1w1 NODE_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 22135 30 100.0 36 .............................. TCAACCGAAAAGAGTTTGCAAGACTGCTAGAAATCG 22201 30 100.0 39 .............................. TCAAGATGAGTTCGGAAACATCGTGATGCACGCAAATGA 22270 30 100.0 38 .............................. GGTTTCCCCCCCCGCCCCGCATATTCATGGGTTTCGCC 22338 30 100.0 36 .............................. AATGCAAGTCAACCTTGGTACTGGTGGTTAAGAACC 22404 30 100.0 36 .............................. CGCTCTTCGAGCGAAGGATGCAGCCTCCTTTGAATC 22470 30 100.0 38 .............................. CTTCATGCGTCTTTCTTGTTCCACCATTTGTTGCGCGT 22538 30 100.0 38 .............................. TTCCTTTTTTCCGTTTCTTTTCGTCCTCGCCCGGCCTC 22606 30 100.0 38 .............................. ATAAATCGCGCTGGCCTGTTTGCGATTGGTGGGGGCGC 22674 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 9 30 100.0 38 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTATGAAACGATCGATGGCAAAAAGAAAACGCATTTTTTCGGACCGGATGACGACGTCTTTCCCCACCTCGTGGAGCTGAATTTCCGCCATAAATACGAAGCGTACTATGGCGTCGAGCCAGAAGAGCGATTGATGATCGAGCCTGTCCATGTCCATCACCGTCATCGAGTGGTGACAAGATTCAAAGATATGTATATTACGGGCTGGTTAGGCCATTATCGTCTTTCCTCTTCTCCCGAACAACTGACGTTTCTATACCACGTTGGCCTAGGCAGCCGCAATTCTCAAGGATTCGGCATGTTTCGGTTAATCAGCGAGTGAGCCATTCTAATTGTCGTCGACCTCCAATCGTGCAAAAACCCCAGGGGGTCGACGACATTGGTTTTGATCGCTTGATCCCTACAGCCATCATGGTTGAACTTGATTGACAGAATCTTCGAAACGTGATATTCTGATGATGACGCTGAAGGGAAAAGGTTGATATGACAACACTTTTTGG # Right flank : TC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 44881-42866 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPYA01000060.1 Geobacillus icigianus strain G1w1 NODE_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 44880 30 100.0 36 .............................. ATGAAAATATGCACATATGTAGTTGACATCGAGCAT 44814 30 100.0 36 .............................. TAATAAAACGTATTGATATTCCCGAGATTCCAAGGC 44748 30 100.0 37 .............................. AACGATATCAATTTGATGAACGGTGTTTACGATAGTG 44681 30 100.0 39 .............................. GATCACCAAATTCAGAAAGAAGAGATTTAATTTTTGCCT 44612 30 100.0 36 .............................. AAGCTGCTCCTGTTCCAGCAGAACCGAAGATACCTC 44546 30 100.0 35 .............................. TTAATTTTGTGAGAAGTTAATTTAGGGTCAACTGT 44481 30 100.0 35 .............................. ATTCGCATGATTGAACAGTACAATTTAACGCAGTA 44416 30 100.0 37 .............................. TCCCACTTTCCGCCCTCGCTCACTTTCGCGTGAGCAA 44349 30 100.0 36 .............................. GAAACTTCATAAGACTCGCTAGTCAAATAACAAACA 44283 30 100.0 36 .............................. TACTGATTGGCGTTTAGTTGATGTGAATAACTCTAA 44217 30 100.0 35 .............................. TACTTCTGTTGTCCGTGAGTATCTTGGATATCTTC 44152 30 100.0 35 .............................. TACTTCTGTTGTCCGTGAGTATCTTGGATATCTTC 44087 30 100.0 38 .............................. TTTTTGTTTGTCAAGCTGACAGAATGATAGATAGGCAA 44019 30 100.0 35 .............................. TCGTGCTATGCGTCGGGGACGGTCTTTTGTTGACC 43954 30 100.0 35 .............................. CTGGTGTTCGTTCCTAACTGATTTGGGAGAGCTTC 43889 30 100.0 36 .............................. CTATCATGGTTTTAAGTATGGCAAGCCTTATACCGA 43823 30 100.0 36 .............................. TAAATAAGCGCGTCAATTTCTTCACCAAATAAACCG 43757 30 100.0 35 .............................. CTTTTCGTGACAATAGCATAACAGCGATCAGACGA 43692 30 100.0 37 .............................. TGAGCTGTATGTTCATAACATGAACGCCGGAGAGGAC 43625 30 100.0 38 .............................. TGTAGAAGAAAGGGAGGAATAGAAAATGCCAGGTGTAC 43557 30 100.0 39 .............................. AGTGGTCAGGGAAAAATCATTGAAGCGAAAGAGATTTCG 43488 30 100.0 35 .............................. CCGTCACGGATGGGAAGGGTGGCACAGCAACGCGC 43423 30 100.0 37 .............................. CAATGACTACTGGTGTAGTTTTTCGGATATCATAAAT 43356 30 100.0 35 .............................. GCTGCATGACTTGCGGAAATGTGTCGCCAGTAAGC 43291 30 100.0 36 .............................. CTACACCTAGAATGGAATCACCCCCTTTATGGATAG 43225 30 100.0 37 .............................. TGTACTCACAAAATCAATACGAGGAAAGGTGAAAAGA 43158 30 100.0 39 .............................. TCCTTCCTTTGCCTCGCCGGCTTGGGCACAGGGTGGAAC 43089 30 100.0 35 .............................. AAATATATAATGCTTGCGAACAATGTAAAATCGAA 43024 30 96.7 33 ................C............. TTGGAAAATTCGTGCCTTTGCGCGCAAGGCATC 42961 30 90.0 35 A................T.....A...... AATTCCTCCATGATCGTTGACCATCTTTTTCTACG A [42937] 42895 30 76.7 0 .GA.....T...T.G.........G....T | ========== ====== ====== ====== ============================== ======================================= ================== 31 30 98.8 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TTTCCGATGATATCGTCCGCGTCGCCCGTTCACCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCCCCGGCTGTGCAATATTACACTTTATTCGACAGCGTGCCGTCCGGGCTTGTCAAAGGCATCGCCGCGCTCTTGCGGTTTGATGAGCCTAGCGATGCCGAAGCTGCTGCTCTCCAGCAAACGATTGAACAACACGGGATCGAAGGCGCGCTTCGGCAATACGCGGGACTGGAGCATGACCATCCGCTCGTCGTGGCGGTGAAGGAAGAATATGCTCAAATGAAACAAATGGATTCGCGTTAAACTCGGAGATCTCTTATATTCTGTCGTCGACCTCCAATCGCGCAAAAACCCCCGGGGGTCGACGACAACCGTTGAAAGCGCCCCCACCTTCCAGCTACCGAAGGAAAAAGAAATTGACACAATTTTTGAAACATGCTATTCTGAAAGCAGCTGCCAACGGAAACACCTGATTTCACGGGCTTTGTTTGG # Right flank : AAAGAAAAATTTTAACCAAGGAGTCGGGTTCATGTCTCCTTTTTGTTTGGTTGTCAATGGATGTGAGAAAATTTGCGTGTTTGCGCCAGTATTGCTTTCAGCGAACGGAATCATCATAATACAAGCCTATATGTTTTCCGGCGAGAGGACGAAAATCAAGGGAATTTTACGAAGAAGTATTGTAAACCGCTTTCATTTGGTTTATAATAAAGCTAAACCGGTTTATGAAAGCGTTTTGGGAACTAAATCGATTTAGGGCAAGAGAGGGATCCTTGTTGAAAAAAGTCACGATGGCCGATGTCGCGAAATTGGCCAACGTTTCCAAAAGCACGGTTTCGCAATATTTGAACAAACGCTACGAGTATATGAGCGAGGAAACGAGAAAGCGCATCGCCGAGGCGATTGAGGAACTTGGCTATCAACCGAACGTGATCGCCCGCAGTTTGAAACAAAAAACGACGGCGACCATTGGCGTGATCGTTTTTAATATGCTTCATATG # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 32-1341 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPYA01000050.1 Geobacillus icigianus strain G1w1 NODE_77, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================== ================== 32 30 100.0 35 .............................. TCGTATGGGTCATATCGCGGTCTACGGAGGTGGTC 97 30 100.0 37 .............................. CTCGGCCTTCAATCCCTAAATCATTTCCGACGGATAG 164 30 100.0 41 .............................. CCCGGTCTCATTTGTTTCCCCTCCAAATAAAATAAGCACCC 235 30 100.0 36 .............................. AACAGAAGGACGAGCGCCTGACGCGCCGCACAAGGA 301 30 100.0 37 .............................. TATACCGCATACTTCAACCGTGCTTTCCAATCCTTAG 368 30 100.0 40 .............................. AAAGAAGAGCCAGAATTTGCAACCAAATGTGCTATTTACG 438 30 100.0 37 .............................. AATTTACGCTAAAAAACCCAATTGAAACATCAATCGC 505 30 100.0 36 .............................. TACATTTTTGCGTACAATTTCATTTTGTCTTCTTTA 571 30 100.0 35 .............................. GACCAGTGTTAATGCGTTGTCCGTCAGGAATTTTC 636 30 100.0 36 .............................. TCCTCTACGTCGTTCGAGGGTTCGTTGAATTTCATC 702 30 100.0 37 .............................. CTAAAAAACTGTTTAATCCCCTCTAATGTCTGATTGA 769 30 100.0 38 .............................. AAAATAAAAACGCTCATTTTCTGAGCGCTTTTTTCAAC 837 30 100.0 35 .............................. CCGTGCAACTCACGAGCATCAACAATCTTTTCGCC 902 30 100.0 36 .............................. CAACAATTGGTTGGACTGATAGACCGCGGCAGGTGC 968 30 100.0 35 .............................. TCTCCACCTGCAAACGACGCTTCCTTCTGTAATCG 1033 30 100.0 35 .............................. TTCGTTTAGCTGACTACGGAAATCAAAATGCAGGC 1098 30 100.0 37 .............................. TCACCAAAGGCATTAAGAGTGAATAGCGGCCTAACAC 1165 30 100.0 35 .............................. TACTGTTTTATGTTTCGTTTCGTCCTCGCCCGGCC 1230 30 86.7 51 .....................T..C.T.C. TATGAGGGATTGAAACCTGTACCAGATGCACCGAAAATCAAAACAAAGTCT 1311 30 83.3 0 ...................C.A...TCT.. | C [1339] ========== ====== ====== ====== ============================== =================================================== ================== 20 30 98.5 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GCGCTGGCCTGTTTGCGATTGGTGGGAGCGCG # Right flank : CTGTGAGCAGGATGCCGCCTTGAGGACGGCGAATAGAAAAAGAGAGACCATCAAGGTGAGGTGATGGAATGGCGATTGACCATGATCGGCTGTTCAAAGAGCTGATCCGCACGTTTTTCGAAGAGTTCCTGCTCCTCTTTTTCCCCGACATGCACGAGCATATCGATTTCCATCATCTGTCCTTTTTATCCGAAGAGCTGTTTACCGATGTGACGGCCGGTGAAAAGTACCGCGTTGATTTGCTGGTCGAGACGAAGCTGAAAGGCGCAGACGGGCTGATCATCGTGCACGTGGAAACGCAAGGGTATGTCCAGCCGTCGTTTGCCGAGCGCATGTTCCTCTATTTCAGCCGCTTGTATGAAACCTACCGGACCCGCATCGTTCCGATCGCCGTCTTCCACTATGATTCCCTCCGCGAGGAACCGTCTGTGTTTTCGATGGAATTTCCGTTTGGGGAAGTGCTGCAGTTTCGCTTTTTTTCGGTGGCGTTGCGGAAGAAG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 3542-3176 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPYA01000050.1 Geobacillus icigianus strain G1w1 NODE_77, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 3541 36 100.0 30 .................................... TTGATATTGATCGGCCAATCTCTCGGATTA 3475 36 100.0 30 .................................... GCTTATTTAAGTTTATTATTTCCATTCCGA 3409 36 100.0 30 .................................... ATTTACTACGGTTCCCCGAAGCGTCCGAAT 3343 36 100.0 30 .................................... GCTTACCACTTCCGCGATTACGTCACAGGC 3277 36 100.0 30 .................................... GTCAGTACCAATATGAAAACGGAAAATCCG 3211 36 72.2 0 .........................CCCGAGT.CGA | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 95.4 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : AAAGCTTCGTCACCGCAAGCCGAAGCCAAAACCCTTCGTTGTTGAAATTGCCGGAACTTCTCCCATTACAACTGCACGTGTATGAGTAAGTTTATGCGGCTGCTCGTCTTTTTTGATCTTCCCGTCGTGACCAACCGGGAGAAACGTGAATACCGGCGATTTCGCACATTCCTGCTCAACGAAGGGTATGATATGCTACAGTTTTCGGTTTACAGCCGTGTCTGCCATGGACATGAGGCGACGGATAAACACTTGGCAAGATTAAAACGCAACTTACCCCCTCGAGGATCGATTCGGGCAATGATCGTAACGGAAAAGCAGTACACAAAAATGCAACTGCTTCTCGGGGAACCAACAGCCCAAGAAAAGAAAATAACATCCACACAGCTGACACTTTTTTAAAAAACGGAAATGGTTCCCCCTATTGCATAGACACATTCGTATTTTTTAAAAGCAAAAAAGCCCGCGATCCTTGAGATTGCAGGCTTTTTTGGATACGT # Right flank : CAGTTTTGAGGCCATTTTAGGCAAATGAAAATGGCCAAAATGCTTTGATATCAAGGAGTTTACGATGTGGCCCCTAGAAAAAAACGCCGAATTCCATAGGCACACGACTTGCCTATTTTAACTTTTAAAAGAGCTGAATATCGGTTATAATATAGACATGTACATACGACAAGTTACACGCAAAAAGAAAGATGGAATCACCGTAGCTTAACTCCATCATGAATCGTGGCCGAACGTAAGAGACGAATGCGAACGTCTCATGCTTGGACATTTTTCTTCAAAAAACGGCGACCTTGGTCAACGACCGAACGGACGGCCAAACAAGTGCAACTCTTTGCGGCTCTAGGGCTGGAGCCTCCTCCGAAGATTCTAGGCATCCATCCTTGCACCTAGATACACGCCCAACGTATGCCCCAATGCCTCTCGTCCATTTGGTATCAAGGGATGAGAGGCATTTTGTTTGCCTAGTCACTGTCGAACTCGGGTCAGGGGAACTATGA # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //