Array 1 497-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNOU01000015.1 Eubacterium barkeri strain VPI 5359, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 496 30 100.0 36 .............................. ATGTAAGCAAAGTTTACGATGTCTGTTGTTCTGGCG 430 30 100.0 38 .............................. AAATGAAACAACATAATTATACGGTAGATGATGTGATT 362 30 100.0 35 .............................. CTCTATCTGTCACAATATTCGGATATTTTGGAATG 297 30 100.0 36 .............................. CAAATTGCTTGATTTCAGGGTATTCCAGACCAGTAT 231 30 100.0 36 .............................. ATAACATTTCGTTAAAGGCTTCCCAGTTGGATCCGT 165 30 100.0 37 .............................. CTATTAAAAATAGTATTTAATTCAGCTTTACCCCCGC 98 30 100.0 38 .............................. AGCGATACGGCGTACGCTTTGAGTTTTGTACTCCGGCC 30 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 100.0 37 ATTTGTAGAATACCTATGAGGAATTGAAAC # Left flank : GATGGGTGAAACCCCTTATGTTCCTTACGTCAGTCGGTGGTAAACATGTTTGTTATTCTATTTTATGATGTAGGAGAAAAGCGCGTTGGAAAGGCCTTGAAGATTTGCAGAAAATATTTATCATGGGTCCAAAATTCCGTTTTTGAAGGTGAAATATCCAAGGCTAACTTAGTAAAACTGCAAAATGAACTGAAGACGTACATTGATGAGGACTACGATTCGATTATTTACTATGAATTTCGAACAAAGCAATATATGAACCGTCAATGCATTGGCCAAGACAAAGGTGGTTTTGTACAGTTTTTATAAATATACAAAACCGACATAAATATTTGTCGTCGATGTGTCATGTCGTAAAATGATGGTATCATCGACGACCTTTTTTAGAAAAATTTGTCTTTTTGACCATTTTTTGTCAATCTTATAAAGAACTTATTTTATTTTTAGTGTCAATCTGATATTATTATACATGTAATTGTTTGTTTATGCGGAAATTTGGG # Right flank : C # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTAGAATACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 2 79281-77100 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNOU01000015.1 Eubacterium barkeri strain VPI 5359, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================== ================== 79280 32 100.0 36 ................................ CCAAGTTTTTTGGTTAAACGAGCCGGGCTATGGATC 79212 32 100.0 34 ................................ CTCCAAATCGAGAGTAGTACACAGCGTACGTAGG 79146 32 100.0 37 ................................ TGATCCTGAGTTGATCGAGCTCTTCAATGATTTCCTT 79077 32 100.0 33 ................................ ATACACCGGGTCCTCGTTATAAAATCCGCATTT 79012 32 100.0 38 ................................ CATCGAGGTACAAACATGAACAAAATAAGCAATGGTAT 78942 32 100.0 35 ................................ CTTCGATTTACGGCAACAAACCAGATCCATTTCCC 78875 32 100.0 35 ................................ TTTGGGCAGCTCTACCAAGCTGCTGACGCCAAAGC 78808 32 100.0 35 ................................ TGCTATTTCACCAATGGTTGCTTCTACTCCTTCAA 78741 32 100.0 34 ................................ CGGTCATTCAATAAATCAACATCAAACGGAAAAT 78675 32 100.0 33 ................................ TGAAAATAATGCGCTGGCATTTCCGCGCCGCTT 78610 32 100.0 34 ................................ CTTTAGATTCCTATAGATGCCTTAAACATGCGCC 78544 32 100.0 35 ................................ GAAAAAAGTATAAAATATAAGAGGAACAGAACAAC 78477 32 100.0 33 ................................ CTTATTCATGGCCATGGTTAATATTCCTTTCTT 78412 32 100.0 34 ................................ TGAAAGGTGCTTTACATATTGATGACCGGAATGG 78346 32 100.0 34 ................................ CCGATTTCACCCGATTGTCGGTATATGGTTCATT 78280 32 100.0 35 ................................ TGGTGTTTTTAACGAAATTATTATGGGGTATGCGG 78213 32 100.0 35 ................................ ATAAAATCCATTTGCTATAAATACAGGAACGTAAG 78146 32 100.0 33 ................................ ATTAACTTTTATTGTATTATGATTACATAACAT 78081 32 100.0 34 ................................ GTTACCAGTTTGAGTGTATCCGTGCATTGCTATT 78015 32 100.0 33 ................................ ATAGTTTTGTTGAGCAATTGAAAAATCTAGGAT 77950 32 100.0 34 ................................ GAAACCTTGTTTATATTGGGTTTGTTATCTTCCT 77884 32 100.0 35 ................................ CTACCCAGCTTATGGGTTACATTAATTGGATTTTC 77817 32 100.0 34 ................................ GCAGGAGCAGGTCAGGGCATTCTCAGTCTCAACC 77751 32 100.0 36 ................................ GACCCATTGTTGACATTGCCACCGAAAAGGGCGACG 77683 32 100.0 34 ................................ GCAGGAGCAGGTCAGGGCATTCTCAGTCTCAACC 77617 32 100.0 36 ................................ GACCCATTGTTGACATTGCCACCGAAAAGGGCGACG 77549 32 100.0 58 ................................ CAGATTAGAAGGCCCTCTGGTTATCTGGTAATTTAGTCACCCCTCGCTGAGGGGTTAT 77459 32 96.9 33 ...........T.................... TGGGAAATTGTTGGTGGGGTCCAGGGGGCCATT 77394 32 96.9 35 ...........T.................... TTAACCGGTATAGCCCGGTACCCAGCCCGTTTCCA 77327 32 96.9 33 .................A.............. CCCTGTTGCAAGACGGCTACACAGTGTTAATTT 77262 32 96.9 34 .................A.............. GTCACATTGTCCTGGTATTTGGCAAAAATGTAGT 77196 32 90.6 33 ..................A.....C.....G. CTCTATCTGTCCCAATTCTGTTATTGATGTAGA 77131 32 68.8 0 .......T.TAT...A..ACA.....C....C | ========== ====== ====== ====== ================================ ========================================================== ================== 33 32 98.4 35 GTCACCCCTCGCTGAGGGGTGTGGATTGAAAT # Left flank : | # Right flank : AGCCAATCTGTCAATCGGATGGGGGCATCACCCAAGGAATTGCTTACGACAGGGAACAGAGTAAAAAAAGAATAATTAATATTTAAAAAGCAAGAAACGACCCCTCTCCTACACATAGGACAGAGTGAGTCGTTTCTTGTCTTAAAAGGCCTTTCATTTTATTGAATCAGCATTGTCTAATTCCACGGATCGACATAAAGCCCCATGGGATAACTCAAATACCGCAGGCGATCCAGCTGATCGACGGTGATATAGCCAGGCTGGGCATTGATTACTGTGGGAATACGATTGACGATGGTGGCACAGGTGTGTTCAACTGTGGCGGGCTTAGCCACGGAGAAAGTAGTATCGGGTTCGCCGATAATTTTCCAATCGCATAAATCACCATCATCTGGTCCGTAGACCTTCCCGATACAAGAGGTTTCAATGATGGGTCCCTGGAAGGTTTCGGTAGTAACCACTGCACCCATTCCAATGACCCGGCCAGGCTCAATGGTTTT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:0, 3:3, 4:0.92, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCCCTCGCTGAGGGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 1 9-1032 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNOU01000001.1 Eubacterium barkeri strain VPI 5359, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 9 30 100.0 36 .............................. TAAGCATAGGATATCCAAATATACTATAGGAGGTAT 75 30 100.0 36 .............................. TTATCTGCAGTCAAAAATGCAATGGACTGTTCAGCT 141 30 100.0 37 .............................. AGCAGGCCATCCAGGCGGTGCGGGATGAGCTGTCCGC 208 30 100.0 36 .............................. TCTCACTGTACGGAATTGTGACTTTTATAATGTTAC 274 30 100.0 35 .............................. CTGATAAATCGTACAGCTCTGCCGTCACCCGCTTG 339 30 100.0 36 .............................. CGGCTGGAATTATACAGGCCTGGCTAAGCGATATGG 405 30 100.0 36 .............................. CACTCTCCTTGAGATACACTCGGCAAATCCATCTGG 471 30 100.0 37 .............................. TTTTGACCAGGGCCTGGTCAGGTAGATCCTCAAGCTG 538 30 100.0 37 .............................. TGGTTAATAATAAAGTAATGGGTGAGCTCATACACGC 605 30 100.0 38 .............................. TGCAAAATACACCACGCACTATAAAGAGGCGACTTCGA 673 30 100.0 36 .............................. TGCAATCCATGGTAAGGATGGGGTCAGCGGTTCGAA 739 30 96.7 38 .............T................ TTCACGGATCCGAAGGAGCTGCGTCACCGTATGCAATT 807 30 100.0 37 .............................. CCACTTCCATTTTTCCATGTGATACATAATGAACTTT 874 30 100.0 35 .............................. TACATCCCCCTTTTTATCCTGCCCTTTAATGCCGG 939 30 100.0 34 .............................. CTTAGTTTCGTCATCAATGAACTGTTTGTTTTCC 1003 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ====================================== ================== 16 30 99.6 36 ATTTGTAGAATACCTATGAGGAATTGAAAC # Left flank : CCTCGCTCA # Right flank : AAAATAGGGACATTCTCTTTCAATTCAGAAGACCATTATTTGCAGAATACTTATAAGAAGTAGTGCCTAACATTCCTGAATGACGTCACGGTGTAAGAATGGGATATCGTAATCTTTGCATGAAATGGGTCAATTGCCCACCAGCCGATAATGTACGTTTTTGAATCAAAATCTCATTGAGATAGTCACGGGAGATGTCTGTATCGTTACTTCTCTATTTAAGCGCATTGTCCATGAGACAGGGGGCATGCTAAACATCAGGGTTAAAATCAAATATCTTCCACAACCCCTTTAAAGAGCAAGGGAAAACCCATGAAGTTTCTGTTAAAAAACACGCGTCCGTCACAGGAGTATGCTATAATGGAAAAAAATCATAAAATTTAAGAGGAGTAACAAAAGCGTGAAGAAAAAGGAACTAATCATTGCCGCCATTGTCCTGGTTGTAGTTTGCGTTGGTGGGGCATTTGGCTTTACAGCGCTGGGGAATAGCTTAAAGGGGG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTAGAATACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //