Array 1 856-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPND01000092.1 Fusobacterium nucleatum subsp. animalis strain P2_CP NODE_92_length_856_cov_147.981_ID_183, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 855 36 100.0 35 .................................... TAAACAAGAAAAACGGAAAAAATATAGAAATCAAA 784 36 100.0 39 .................................... ATAATTCCACTTTAATATTTAAGAATCTACAAGCATTTA 709 36 100.0 35 .................................... CCATTGATGGTCTGCAAATTCTAATGTGAAGTTTT 638 36 100.0 44 .................................... TAAGTTCACTAAATACATCTTTATCATTTCTATCATAGTCAAAA 558 36 100.0 40 .................................... TTAGAAGTGCTATCTTCATAAGCTATTCCTCTTTCTTCTA 482 36 100.0 41 .................................... ATAAATTACTTTTCTTTTTTAGTAATTGTAATTGTTAGTGA 405 36 100.0 37 .................................... TTTTATAGAGTTTTTAAACATATATAATTTTGTGTAA 332 36 100.0 38 .................................... TTTCTCTTAATACTCTTAAGTATTAAGATTAATTCTTT 258 36 100.0 39 .................................... CTTCGGCTACATAATCTTTATCACAATCAAACTCAACTT 183 36 100.0 38 .................................... CCTGTCTACTTTTGTCTTTAATGCTATTTTTTATTTTT 109 36 100.0 35 .................................... TAAACAAGAAAAACGGAAAAAATATAGAAATCAAA 38 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================ ================== 12 36 100.0 38 ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC # Left flank : | # Right flank : CAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [3.3-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 76229-75739 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPND01000008.1 Fusobacterium nucleatum subsp. animalis strain P2_CP NODE_8_length_76245_cov_61.0941_ID_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 76228 36 100.0 39 .................................... ATTTTTTAATAAAGAAAATATATAATACAATAATTACCC 76153 36 100.0 39 .................................... ATAATTCCACTTTAATATTTAAGAATCTACAAGCATTTA 76078 36 100.0 35 .................................... CCATTGATGGTCTGCAAATTCTAATGTGAAGTTTT 76007 36 100.0 44 .................................... TAAGTTCACTAAATACATCTTTATCATTTCTATCATAGTCAAAA 75927 36 100.0 40 .................................... TTAGAAGTGCTATCTTCATAAGCTATTCCTCTTTCTTCTA 75851 36 100.0 41 .................................... ATAAATTACTTTTCTTTTTTAGTAATTGTAATTGTTAGTGA 75774 36 88.9 0 ....................A.A...G...A..... | ========== ====== ====== ====== ==================================== ============================================ ================== 7 36 98.4 40 ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC # Left flank : AAAATATAGAAATCAA # Right flank : TCATTCTATTGACAAAAAATCAATATATTTTTATAATATTAATATAAGGAAATAGAATTCTGAAAAAAGATAAAAAGTGTAAAGATGTTATGATATTCTAATATTCAACTAAGAATTTCTCACAATTGAAATTTTTATAGAAAAAATAAAAACTATTTAAGGAGGAATTTTATGAAAAAAACACTATTTTCTATATTGCTTATAGGAATTTGTATGACTGGAGTAGCAAATGCAAAAGAAAAAAATCCAATTCTTTTAAAACAAGTATACAAAAAAGAAGAATTAATAACATTGGATAAACAAAAGGTAGCAGGAGGAAATGGAACTTTACATGGGAAATTTGCCTTTACTAGAGATATGGCTACTGAAGATGAAGCTATTAAAGAAATAGGTTGGATGACATTAAATAAAGGGGAATCTATTGGTGTACACCCTCATAAAAATAATGAAGATACTTACATTATTGTTTCTGGAGAAGGAGTTTTTACAGATGGCTCTGG # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 9722-9983 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPND01000049.1 Fusobacterium nucleatum subsp. animalis strain P2_CP NODE_49_length_10001_cov_48.8275_ID_97, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 9722 36 100.0 37 .................................... ATGTGTAATAAAATCTGTATCTATATCTATATCAAAT 9795 36 100.0 40 .................................... TTAAATAAGATACATTATAGTTAAAGTTGCTTTTATTTAA 9871 36 100.0 41 .................................... CTAGTCAATTTAAAATTTTTATAATTGCTATTACTAGCAAT 9948 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 4 36 100.0 40 ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC # Left flank : TGTAGATATATATAAGCCTGTTTTAATTAGGTGATATTATGGATAATTGGGATTTTTTAGATGAAGATTTTGAAAAGGAAATTTTTGAAGATAACTTTACTGTTATTATAATTTATGATATTATATCCAACAAGAGAAGAACACAATTATCTAAACTTTTGAGTGCATTTGGATTTAGAATTCAAAAATCAGCATTTGAATGTCTTTTAACAAGAGAAAAATATAAATTGCTTATTGAAAAAATTGATAGGTATGCAAAACCTGAAGATTTAATAAGAGTTTATCGTTTAAATCAAAATGTAGTAACTCAAATATATGGAGAAAAATTAGAAAATGAAAATGAAATGTACTACTTTTTCTAATGAGAGTTAGACGATATATTAAAAATGGGAGGTTTAATATGATTTTTGATAAAATAAAATGTAATCTTTTAAATTTTAAAAAGTCATACGATAATAGCTTTATAAACTATTACAAACAAGGTGTTTTTTGACCATAGG # Right flank : TAAACAAGAAAAACGGAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAGAGAATATAACTCCGAGAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //