Array 1 425523-422898 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFGA01000002.1 Pelotomaculum schinkii strain HH Psch_contig000002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 425522 32 100.0 35 ................................ AATAAACGAATCTCCCTCTGCCTGTATCATTTGGT 425455 32 100.0 36 ................................ AACGTAGACGATAAGTTGAAAGATATTGCGGTTATC 425387 32 100.0 33 ................................ CTGTCCGGTAGCGCGGGAGCCAAGACAATGACC 425322 32 100.0 38 ................................ TGCGAAATAACTTGAGTAGCTATCAGGCCTCATGTTGA 425252 32 100.0 35 ................................ CGCTCTGTGCCCAAGGGTAAATCCAATACCCTGTC 425185 32 100.0 33 ................................ CCGGATCCAACGTATATGTCAACACCATTCACA 425120 32 100.0 36 ................................ CGCTCTCTCACCGCCTGATACTCCGTCGCCGTCAAG 425052 32 100.0 37 ................................ CTGTTGCCTTCGTTGCGTTTTACAAAGGACGGCCAGG 424983 32 100.0 35 ................................ TATTTGAAAGCAGGTTCCCAACGACCCAAGTTTAC 424916 32 100.0 34 ................................ GTTGAAGGTGAGTCCGTTAATGGCCCCGCTATAA 424850 32 100.0 37 ................................ CCTGGTTGGGGAGCCATACGGAAGGAGTTGTTGTCAT 424781 32 100.0 35 ................................ AGTAATTCAGGGTTGTCGTGGATATTCCCGATAAC 424714 32 100.0 32 ................................ ACAGGCAATAATCCCGCCAAGACCTTCTATGG 424650 32 100.0 33 ................................ TTTGCTCCCCGGATATAAAAACCTTGCTGGTGA 424585 32 100.0 35 ................................ GCTTGTGACGCGGTTCCAAACCGTGTATTCTTTCA 424518 32 100.0 33 ................................ ACGACCTGGCTGTCAATGTCATTGATCGTCTCA 424453 32 100.0 33 ................................ CTGGCGGCAGTGGACGTTTGAGAAATCGTTTAC 424388 32 100.0 34 ................................ AAGATAAGGCAGTCCATGCTCTATGATGTACGCC 424322 32 100.0 34 ................................ TACCTCAGTAAACCTGCTGTTGGCTGGGTCGTAG 424256 32 100.0 33 ................................ ATAGCTTTTTTGTGTATTTGCTTGATTGAATGG 424191 32 100.0 35 ................................ GTATTCGCACCGGCAACAAAAACACTGTCGTTGAC 424124 32 100.0 36 ................................ CAGTGGACAGGATACTTATCAGCAGGAGATAAAATA 424056 32 100.0 34 ................................ TTGAATGCATCGGAGAGATCGCCCCGGCGACGTG 423990 32 100.0 34 ................................ TGGTCCATCCCTTCGCCAAACGACCCAAAACTGT 423924 32 100.0 34 ................................ TTCAAGCTGCCGGTCAAGGCCAAGGCCAAAAAGT 423858 32 100.0 34 ................................ TTTGAATTTAGCTTTACCCAGTAGTTCCTCCACC 423792 32 100.0 34 ................................ ACGCTGCGCAAGGACCTGCTCCTGGGGTTAATCC 423726 32 100.0 34 ................................ AAAATTCCGTGGTTTGGAAAGGTTACACTATTTC 423660 32 100.0 35 ................................ CACTTGACCGGGGGATAACACCTGCTGGTTTAACT 423593 32 100.0 33 ................................ AGTAGAAAGTCAGCTGAAGGGGAAAAGCCAAAA 423528 32 100.0 35 ................................ ATCGAAGCATTGGTATTTTCCGTAACAGTAAGCAG 423461 32 100.0 34 ................................ GCTCTATGTTTTGATTACAATGCGCCATTTAGCG 423395 32 100.0 34 ................................ ACAAGCAGTCAATTGCATAGATTTTGTGAGCCGT 423329 32 100.0 35 ................................ GTGGGTATGTTTACATCCAAGCCCCCAGCGAATCA 423262 32 100.0 34 ................................ AGGCCGCTCATGATGTGTCGGCTATGGATTCTAA 423196 32 100.0 33 ................................ ACAAGAGGAGCCGGGGAGCTTTATGCAGGAGTT 423131 32 100.0 33 ................................ CCATAGAGGAATGGGGTATTTACGGCAAGATAA 423066 32 100.0 39 ................................ ACGGTATTGTGGATCAACTGCATTTCCTCCTCGGTTAAC 422995 32 100.0 34 ................................ CGGAAGGCAAACAATTGGATTGCGAAACGACAAA 422929 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 40 32 100.0 35 GTCGCTCCCTACATGGGAGCGTGGATTGAAAT # Left flank : TACCCGCATATGAGGATACCGCCGATCTGCTGGAAAGAATGGAACGCGACGCCCGGCTATATGACGTAAATACTCAAACAGCGGTGGGGAGAAAGCGGCTGCGTCAAGTTGCCAAGCAATGTGTGAACTATGGGCAGCGTGTTCAGAATTCGGTCTTTGAATGCGTGTTGGATATGGCTAAGTTCCGCGAGATTCAGCATAAGCTGGAGAAAATTATTGATACGGAGAAGGATAGCCTGAGGTTTTATTTGCTGGGAAATAATTACAAGAACAAGGTTGAGCATGTGGGTGCAAAAGCTTCTTTTGATGTTGAGGATACCTTGATTATTTAGTGCGAATGTGAAGCAAACATAAATCCCTGGGGGTTTCGCACCGCGAGATGGGAGGAAATTTGTTGAAATATGCAGGAAATGTCGGGAGGACAATGGTGTATTTTATGAAAAATAGAAGAAGATGAATGAAATCTATCTATTAAAAGATAGTTTTTATTAGTTTTTGCT # Right flank : TCCGGCATTATCATGCGACTTGGCTGTATGAAAAGTCGCTCCCTACATGGGAGCTCACACTTATCCTCCATTGAACATCATGCGGTATTGAATTCATGTACCTTTCTGGAAGACATGGGGTATCCGGTGGATTATTTACCTGTTACCAACAAGGGGATTATGATGTCAGAAACCTTGCAAAGTGTAATCGCAGACGACACGTGTCTTATTTCTGTGATGCTGGCAAATAATGAAATCGGTACCATTCAGGATATTCGAACTCTTGCAGATATTGCGCATCTCCACGGTGCCCTGTTCCATAGCGATGCGGTGCAGGCAGTCGGGCATATACCGGTAGATGTAAATACTCTGGGTGTTGACATGCTGTCAGCATCTGCTCATAAATTTAATGGGCTGAAAGGCATTGGCTTCCTGTACGTACGCAGTGGCACGGTTCTTATCCCCTATATTTCTGGAGGCGCACAGGAAGGTGGTAAACGTGCCGGTACGGAAAACATAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 823077-823431 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFGA01000002.1 Pelotomaculum schinkii strain HH Psch_contig000002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 823077 30 100.0 34 .............................. CATGACCAGGGTGGTCGGTTACTTCACCGAGCCG 823141 30 100.0 36 .............................. TTTGTCATAAATATCACTCGCTTTCATATCATAGAT 823207 30 100.0 36 .............................. TGAACACTACGACGTATATAATGTAACTTATCACAG 823273 30 100.0 36 .............................. AGTAGTTCTGCATAGTTGGAGATTAGTTTTAATCCT 823339 30 100.0 33 .............................. CCGGTGCAATGCGAGAGTAACCCGGAGATACAG 823402 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 100.0 35 ATTTACATTCCACTATGGTTCAATCTCAAC # Left flank : TTACAAGCCTATCACGTTAAGCCGGAGATTTTGCCGGAAGAGGACGGCTCTGTCACTGCTGCTTTAAACGAGTTAGACATCGCTGTTAACGCTTCGAATAAGGAAGCTGCGCTTGATGAACTAGCTAAGGAGCTAAAGCTTTACGCCAGGGATTACCTGGACCGGAGCCAACTCTTCTTAAACGCGCCCAACCGCAAAGGGCATTTCCATATGTCTTGCGGGTAACGCTTTGTAACGACGACAGTGAGATCAGATCTCTACTGGAGCTAGAGTAAATGCCTCCTAAATTTGCAGATTTAAAACGATATTGCGACAACAACGGCTGGACTCTGCTCAGGGACACAGACCACTGGTATTATGAAAAGGTGCTGACAAATGGTGATATCCTTCGCACAAGGGTCAGCCATGCACTTAGTAAAGAGCTCCCGGACAACTTATGGCGGAAAATTTTAAAACAGCAACTAAGGGTTACGGAAGAAGAGTTTTGGTAACAATTAGGT # Right flank : CCGCAGACATGCAAGACATACGAAATGAGCTTGCCCCGTTAAAATAGACACGGGAAATGGCGGGTTTTCTCCTGTTTTCATAGGATTTCGAAAAAAGAGCCGTGGCCGCCCTTGACATGGAGCCTCGCACCCGTGTTGCCAAGGGCCAAGGGGCCAGTATCGCTTTGCTTATGGCCCTTGCCAATCAAGGCTAACACGGGCATTCTCCATGTAAAGGGTCTTCGCTTCGCTACGATGAACGGCCACTTACGCTGCTGTTTTAAAGGATTGTTCGTATTCGACTGGCGACATATATCCAAGGGCTGAATGCAGCCGAACCCGGTTGTAAAAGACTTCAATATATTCAAAGATGGCTTGACGGGCTTCAGCTCTTGTTTTAAATCGGGTACCATAAATCAGTTCCCTCTTCAGGGTTCCAAAGAACGATTCCATACAGGCGTTGTCATAACAATTACCTTTGCGGCTCATACTGGCGTTCATTTCGTAGTCCTTTAAAGCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCACTATGGTTCAATCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 3 831068-831750 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFGA01000002.1 Pelotomaculum schinkii strain HH Psch_contig000002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 831068 31 100.0 34 ............................... AGGATAGCCTCTGAGAGAGCGACCGGTTCGACGG 831133 31 100.0 34 ............................... CCATGGATTAACAACTGAACCTCATTCCATTTGT 831198 31 100.0 35 ............................... GCTACAAAAAGTTTCAAAAAGGGCTTGACATGATA 831264 31 100.0 33 ............................... TCCAGTTAGCCATGGATAGCGCCAGGAGTTCGC 831328 31 100.0 34 ............................... AACTCAGGTTTTCGTCGTGGTAGCTACAGTACCC 831393 31 96.8 34 ..............................C AAAACAGGAAAGGTGCCCAAATTAATTCTACTAG 831458 31 100.0 34 ............................... CAAGGGCAGTATCTTATCCAAAAGGTGAATATAT 831523 31 96.8 33 ..............................G TAGTGCAGCGGCTATTTATGTTTCTGATGATTA 831587 31 100.0 34 ............................... GATGGAGGTAGATGATGCCATCTAAGTGGAACTA 831652 31 96.8 37 ..............................G GAGGTAACAGTAGCCCCATTCACCTTGACCTCAATGT 831720 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ===================================== ================== 11 31 99.1 34 ATTTACATTCCACTATGGTTCAATCTCAACT # Left flank : TTAGGAGCCACCTTTAAACCGGGAGTTCTTCATCCATTCGCATTGGTTTGCCAGTTAGCCGTTGCTCGACTCCTTACCATTTTGGTCGAAGCGTTTCAGCCTATTTCGCTTCCTCCAGCGTAACGATTCCTACAGTGGTTCACTTTACGTTCTCCATAGCTCTCTTACTCTAGCAGTTATCCCAGTTTTAGGCTACTCGGATTTCCACATTGTCTTGCGAGCTTTCTAACCCAGACGTTACCATCTGCGCTAGTCGCAATAGAGTTACCCCGAATGGATAGGGTAGCCTTTCGGCAATATATCAAGCGACTTCTTGTCGCGCATGGCTCCCACGGTCAGAGTGGTGAACCAATCCTGCTGACGGTTTATACCGCCAAACTGCCTGTCTGAGGGCATCCAGGACCAACTTGCGGGTCATGGTGCTATCCATAGCCCAGCCAACAATCTTATGGTTCAATCTCAACATCCAGGGCGACACCGGTTGAAGCTATCTCACCAAC # Right flank : TAATCCTTCAAGTGTATACTCGTCACTGTGAATATATTTACATTCCACTATAAACCTGACCCGATTTGATGGACACGGTAAATGGCTGGTACAATAAAACCAGTGGAGGTGTCCATCATGAAACGTTACGATAAGCATTTTAAAGAAGAAGCGGTCCGCCTGGTAGTAGAGTTGGGGCGATCCGTGGCAACGGTGGCCAAAGAACTCGGTATCCATGAGAACACCCTGCACAAATGGGTTAGTCAGTATAAAGAACATAAGGAAAACGCTTTTCCAGGCAGCGGCAATCTACTGCCAGAGGACGCAGAAACCAGGCGTTTAAAAAAAATGATAGCTGATTTACAAGAGGAAAACGCCATTCTAAAAAAGGCCACGGCCATCTTCGCAAGACACCAGAAATAGCTTATAAGTTTATTAATCAGCACCGCTTCAAATTTCGGGTGGAGAAGATGTGCCAGGTTTTTGGAGTCTCTCGAAGCGGTTACTATGCTTGGCTGAAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCACTATGGTTCAATCTCAACT # Alternate repeat : ATTTACATTCCACTATGGTTCAATCTCAACG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 4 836306-833278 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFGA01000002.1 Pelotomaculum schinkii strain HH Psch_contig000002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 836305 30 100.0 35 .............................. GCAGATGGTTTGGGACGGTAGTTTTAAAGATGTTC 836240 30 100.0 35 .............................. CCAGGGGTACTCATACATTTAGCACCATCACCAAA 836175 30 100.0 36 .............................. TTGGTCTGCCGTATCGGACAAAAGAACGATGGTTCC 836109 30 100.0 36 .............................. TGTCGATTTCCCCGTCACCTTCAACCTCATGATACC 836043 30 100.0 35 .............................. CCGTAAGCTGCTGGATTGTCAGCCTGGTATTCTCC 835978 30 100.0 35 .............................. GCCAGCTGATGAGGGAGCCCGCTATGAGATAGCTA 835913 30 100.0 34 .............................. TAGATTGCTGCTGTTGCTGCATCCATTTTTTAAC 835849 30 100.0 35 .............................. GAAGGTATTTGGACTGAGGCGGTCGGGGCGCTTAA 835784 30 100.0 35 .............................. TCGATTAGTGCCTTGATGATTTCCACCCGGAGCTC 835719 30 100.0 35 .............................. GCAGAAAATTGAAGACATGATGGGGTACGCATACC 835654 30 100.0 36 .............................. TAATACAAACCAGGCTGAGCGTTTGTGTCGCCGGTA 835588 30 100.0 35 .............................. GGCAGCAAGTGGAGGCTGGCTGATTGGATAATTAG 835523 30 100.0 35 .............................. GAAGAAATATTAAAGGTAACAGATAGGCTTATAAC 835458 30 100.0 34 .............................. TCGCTAATGGCAGCCTGGACGTTCCTGGAGGCGA 835394 30 100.0 34 .............................. TTAGCATGGCAACCGGTGCTGCTGCCGGGCTTAA 835330 30 100.0 34 .............................. ACAGAACGCATGTACATGTTTGTAACGTAACTGA 835266 30 100.0 34 .............................. TAGCTTGTGAAGTTTGCCGTCTCCGTCAGTGGCA 835202 30 100.0 36 .............................. GAAAATATCTCCGTTGATTAACTTGCGAAGGAATGC 835136 30 100.0 35 .............................. GATTTCACTGCGCTGCTGGTTAAATTGAATCTTTT 835071 30 100.0 34 .............................. ACATGTCAGCGTAAGATTAAGGCATCTCAGCGAA 835007 30 100.0 36 .............................. CTTCCTGCTCAGTCTTCAACCCAGGCAGCGCCTTCA 834941 30 100.0 36 .............................. GGAGAAATACGAGAAAAAGAAGCAGCAGTTGTTTGA 834875 30 100.0 37 .............................. TTGCTGATCTCGGTTATCTCCGGCCGCCCCGGTATCT 834808 30 100.0 34 .............................. TTGTCAACCACCAGCCGCAGGTGCGGCCTCTCTG 834744 30 100.0 34 .............................. ACACTTGAAAGATTGTACAATGATGGCAAACTGA 834680 30 100.0 34 .............................. GGACCTATAAGGTTGACAACTTCCTCGTGCCCAC 834616 30 100.0 36 .............................. CCTTTATCGTATTGTGATTGAGGCTGGTCGCAATCC 834550 30 100.0 35 .............................. CCTCTAAGCCCGTCAATAACCTCCCACTGAAAAGC 834485 30 100.0 35 .............................. GCCCATACCTAGACCCAAGGCGTAGACGAATTTAG 834420 30 100.0 35 .............................. GAATTTAGTGAAATAATTAAAAACCTCCCTGGTTT 834355 30 100.0 36 .............................. TTGAATAAACCCATTATTTAGCACCTCCTTAATTAA 834289 30 100.0 35 .............................. TGAACTGTTCTACCCCTATCTACCCTGTCAGCGTC 834224 30 100.0 36 .............................. AAATAAAAATAATAATTGACAGTATATTATTAGTAA 834158 30 100.0 35 .............................. CCTCATAAGAAAGCCCCTGACCGGAGCCTGCCAGG 834093 30 100.0 34 .............................. TCCTTGCTTATTCTTTCAGAGCCTATCGGCACCC 834029 30 100.0 36 .............................. TGTTGTCTATGAACAGGATAGATTTAACCGGAACAT 833963 30 100.0 35 .............................. TCGCCGTTAATGATTTTCGCGTTCATTAAGGTTTC 833898 30 100.0 35 .............................. TGGTTTCGATGGGTTTTTCCTTGAGCTGGCGTTCA 833833 30 100.0 36 .............................. ATGCTTGAGCTCGCTCAACTCCAGATACAGCGGCCG 833767 30 100.0 36 .............................. CTGTCCTTATGATTGACAGAGAGGAGGCGACATTAA 833701 30 100.0 36 .............................. TCGCCACAGGGGAGAGCATGGCGCCCCTTTCACATA 833635 30 100.0 35 .............................. TGGCCGCAAAAGGAGCAGCAGCCGAGGAAACTAAA 833570 30 100.0 36 .............................. CTTAATATTCGTATGAGTATGTGGTATATTTGTTTG 833504 30 100.0 35 .............................. CCTTTTATCGCCCACATGACGGCATCGCGTTGGTG 833439 30 100.0 34 .............................. TAAATTATAGGCTAAACTTATCCACCTACTTTGA 833375 30 100.0 37 .............................. TTCGACAAAATAGATTCTTCCAGCAAGGTCATATTGT 833308 30 76.7 0 .....................CT..CCCCA | A [833283] ========== ====== ====== ====== ============================== ===================================== ================== 47 30 99.5 35 GTTGAGATTGAACCATAGTGGAATGTAAAT # Left flank : AAGCATATCATTGGGGAAAAACCTTATCAGGGTTTTAAGATTTGGTGGTGATTGGTTTGTATGTCATACTGGTCTATGATATAAGTAATGAAGAAAACGGGCCGAAGACATGGCGCAGGGTTTTTAAAATTTGCAAGAAATATTTGACCCATATTCAGGACTCAGTATTTGAAGGAGAGCTTAGCGAGTCCCAAATATTTAAGCTAAAAGGCGAGTTAAAAAAACATTTACGCACTGATTTAGATTCATGCATTATTTTTAAGAGCAGGAATGAAAAATGGCTGGATAAAGAGTTTTGGGGAAGGGAGGACAATGCGACTAGTAATTTTCTATAAACATATATGCATGATTGTCTTATGTCGAACCTATATAGTGTAAAAATTCTGGTGGTTCGACATATAAATATTTGAAAAAAATGATATATCTTTAGCTGTAATGCATATTAAGTGTAAGATATACAAGATTTAATGCATATCCTGTATAATATACATTCTTTTCGG # Right flank : TTAAAATAGACATAGAAAATGGCGGATTATCTTCTGTTTTCACAGATTTTCAATTTTAGGCTGGGAATGAGGCTTAGCAAATTCTTTCTCATGTTCGACCAAGTATCGAATAAGAGCCGTGGCCGCCCTTGACATGGAGCCTCGCACCCGTGTTGCCAAGGACCAAGGGGCCAGTATCGCTTTGCTTATGGCCCTTGCCAATCAAGGCTAACACGGGCATTCTCCATGTAAAGGGTCTTCGCTTCGCTACGATGAACGGCCACTTACGCTGCTGTTTTAAAGGATTGTTCGTATTCGACTGGCGACATATATCCAAGGGCTGAATGCAGCCGAACCCGGTTGTAAAAGACTTCAATATATTCAAAGATGGCTTGACGGGCTTCAGCTCTTGTTTTAAATCGGGTACCATAAATCAGTTCCCTCTTCAGGGTTCCAAAAAACGATTCCATACAGGCGTTGTCATAACAATTACCTTTGCGGCTCATACTGGCGTTCATTTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAGATTGAACCATAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //