Array 1 4833-5160 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDXW01000002.1 Zooshikella ganghwensis strain VG4 tig00000002, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4833 28 96.4 32 .T.......................... CTGTTGTTCCTTTGATCGGTACGGCTATTGGT 4893 28 96.4 32 .T.......................... AAGGGTTTAGGAGTAACCTCCGTAAACATTTA 4953 28 100.0 32 ............................ GTTGAGGGTCAGTATCAAAAGGTTATTCCAAG 5013 28 100.0 32 ............................ TTCACTTTAGTATTGTGACTTATGTTGTCTAT 5073 28 100.0 32 ............................ TCAACACAATGGAAAGGTTAGCGATAACGAGT 5133 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.8 32 TCTCTAAGCCGCCTAGATGGCGGTTCAC # Left flank : TTTGACTTTTGGCAAGATGAAATGGCTTAATTTCATTTTCAAAAATATTGTCGTGTATCTCTTTAGGAAGCACGTACTGCTTTGTTAGCATGCTTTTCCCCTTAACTCGCCATATACGCTTTTACAATAGGTGCATACTCATTCAAGATGGTCTCTATCTTTTCATCATCATCGATTAATAGTTCATCAAGCTCATACTGAAACTGATGTTTCTCTGCTCTCCATTGCTTTATTAGATCTTGATTTGGTTCTGGCTTTTGCTCTTCTTCATAGATCCACTTTGAGCGTATAGCAATTAACACACCGATGGTTTCTTGCGCGGTTTCGTAACGCGCTAGCTTCTCTGTCGTACTTATAGTCATTGATAATGCTCACGTCAGTGGTCTGAATCAGGTTAATGTAGAGAGTGCTTGTTCCACAAAATGTTCCACGCGGAACATAACACAGTTGATGTGTGGCTTCTGTATAGCTTTATGTACTGGTCTTTCGTCGATGACATT # Right flank : CTATAGATCAAACTATGTAAAGCCTGATTGTTAAAGAGCTGTAGCGTAATATATGATCGTTGACCCTTTTTCTCGCCCCTACGCTAACATATTGATTTATAAGCGTGTAAAAGTGGCTTCCAAAAAAGGGTCAATTTGCTCGACTTAAAGGTCAGGTAATACAGTCACCTGCTCTGTTGTTGATAGCCCAAAGTTACACGTATTGATTTCACCAAGCTGCCCCTCTTCTACAGGCATTTTCTCAACCGATACGCAAAAAACTTGCTGATTGGACTGACTGTGTAACACAAAACGGGGCAGGTTGTGTTCAAATGCATACGCTAATCGCTGGATACGGTTTTTCTCCCTCTGGGAGGAACACGATAGCGACGGTAAACACACCAAGGGCCTGCATAATCCTGTGCGACAGGAACAGGCATTTTAAAATCACATAAAGGCCCTACGGGATCATTGGCAAGGTTTAATGCCACTAATGACTCAAGCTGCTTGGCAAATACCCG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTCTAAGCCGCCTAGATGGCGGTTCAC # Alternate repeat : TTTCTAAGCCGCCTAGATGGCGGTTCAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 57891-58218 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDXW01000003.1 Zooshikella ganghwensis strain VG4 tig00000003, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 57891 28 96.4 32 .T.......................... CTGTTGTTCCTTTGATCGGTACGGCTATTGGT 57951 28 96.4 32 .T.......................... AAGGGTTTAGGAGTAACCTCCGTAAACATTTA 58011 28 100.0 32 ............................ GTTGAGGGTCAGTATCAAAAGGTTATTCCAAG 58071 28 100.0 32 ............................ TTCACTTTAGTATTGTGACTTATGTTGTCTAT 58131 28 100.0 32 ............................ TCAACACAATGGAAAGGTTAGCGATAACGAGT 58191 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.8 32 TCTCTAAGCCGCCTAGATGGCGGTTCAC # Left flank : TTTGACTTTTGGCAAGATGAAATGGCTTAATTTCATTTTCAAAAATATTGTCGTGTATCTCTTTAGGAAGCACGTACTGCTTTGTTAGCATGCTTTTCCCCTTAACTCGCCATATACGCTTTTACAATAGGTGCATACTCATTCAAGATGGTCTCTATCTTTTCATCATCATCGATTAATAGTTCATCAAGCTCATACTGAAACTGATGTTTCTCTGCTCTCCATTGCTTTATTAGATCTTGATTTGGTTCTGGCTTTTGCTCTTCTTCATAGATCCACTTTGAGCGTATAGCAATTAACACACCGATGGTTTCTTGCGCGGTTTCGTAACGCGCTAGCTTCTCTGTCGTACTTATAGTCATTGATAATGCTCACGTCAGTGGTCTGAATCAGGTTAATGTAGAGAGTGCTTGTTCCACAAAATGTTCCACGCGGAACATAACACAGTTGATGTGTGGCTTCTGTATAGCTTTATGTACTGGTCTTTCGTCGATGACATT # Right flank : CTATAGATCAAACTATGTAAAGCCTGATTGTTAAAGAGCTGTAGCGTAATATATGATCGTTGACCCTTTTTCTCGCCCCTACGCTAACATATTGATTTATAAGCGTGTAAAAGTGGCTTCCAAAAAAGGGTCAATTTGCTCGACTTAAAGGTCAGGTAATACAGTCACCTGCTCTGTTGTTGATAGCCCAAAGTTACACGTATTGATTTCACCAAGCTGCCCCTCTTCTACAGGCATTTTCTCAACCGATACGCAAAAAACTTGCTGATTGGACTGACTGTGTAACACAAAACGGGGCAGGTTGTGTTCAAATGCATACGCTAATCGCTGGATACGGTTTTTTCTCCCTCTGGGAGGAACACGATAGCGACGGTAAACACACCAAGGGCCTGCATAATCCTGTGCGACAGGAACAGGCATTTTAAAATCACATAAAGGCCCTACGGGATCATTGGCAAGGTTTAATGCCACTAATGACTCAAGCTGCTTGGCAAATACCC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTCTAAGCCGCCTAGATGGCGGTTCAC # Alternate repeat : TTTCTAAGCCGCCTAGATGGCGGTTCAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.90,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 2212060-2212387 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDXW01000001.1 Zooshikella ganghwensis strain VG4 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2212060 28 100.0 32 ............................ ATTAGACAGTGCAAAGAGCTTGGACACACCCA 2212120 28 100.0 32 ............................ TCGGATGATGCTCAGTTTCTGGAAACCCGAAA 2212180 28 96.4 32 A........................... AAAAACAAAGCGCTTCATTACGCCTCCTTTCG 2212240 28 100.0 32 ............................ AATTGTCGTCTGGCTTCGAACCAACCTTGGTC 2212300 28 100.0 32 ............................ AGCAAAGTCCAGTAGTGAAGCCCCTGCCAATT 2212360 28 89.3 0 ...........T.....A......T... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 97.6 32 GTTTACTGCCGCATAGGCAGCTTAGAAA # Left flank : TATATTATATTTTGGGTTAACATCATAATTTAGCTTGAGGATCCCTTGAGGTGTATGAGAGTATCTGAATAGCAAGTCAAAGTTATGTTTGGTGAGAGAGCTGAACTGTAGTATTAATGCTTGGCGTCGGATCATTTATTCCGCCACGCCAGAAGGCCGTCCTTGGCCTCTGTCGCTACCGATGCTCCCTGCATCGGCTCCATAAACAATCCACCACCAAGCTGCAAACATTGTTATATGCTGATAGCTCTACATAGAGAGATTTACAGGAAAGTGTATAAAATGAAACTTATTAGTCATTATAAAGGTTTGTAGTCCGCTTCATGAAAGCAGGAGTGTTTGGTATTCTACTGTAGCAATGTGTGATGAACCCTTTTTTTTAAGTGAATAAATAACCACAATAAAATCAATATGTTATAAAATAGACTACAAAAAGGGTATTTTGGCATGAACAGGCAGTCAGCTCTTTAAAAACTTGGGCTTAGTTATAAAAATCTCAA # Right flank : AGTACTCAACTTGTCGTTGAGTCAAGCCTCCAGGGATTGATTTACGGCGTGTTCGGAGGGAGTTAGCAGGTCTTTTTAATATACATACACATAAAGTCCCTTTTGGTGATTAAAGAGTGGATGTTTGACCAAAGGACATCTCTAAAAATGCACTTTTTTTAAAGGTGCCCTAAAGAGTAAGTATTTTTAGTTTGGATGATAAAAGAGTATGGATGATATACCCGCTTCAGACTTAAAAACAATTTTACACTCAAAACGCGCTAATATTTATTATCTCGAGTACTGTAGAGTGTTGGTTAATGGTGGGCGTGTTGAGTATGTTACTGACCAAGGGAAAAAATCTCTTTACTGGAATATTCCCATTGCAAACACTACCTCAATTTTACTTGGAACTGGAACTTCTATAACGCAGGCTGCGATGCGTGAGTTGTCTAAAGCTGGGGTGATGGTTGGTTTTTGTGGTGGAGGAGGAACACCTTTATTTTCTGCAAATGAAATTG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2223425-2223752 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDXW01000001.1 Zooshikella ganghwensis strain VG4 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2223425 28 100.0 32 ............................ TTCAGTACATTGCGTGCAAAAATATGAAAATA 2223485 28 100.0 32 ............................ ATATCCCCCAGGGCAAAATCCACCACTGATAT 2223545 28 100.0 32 ............................ TGCAAACCACCAATCAGCGATAGTCCACCTAA 2223605 28 100.0 32 ............................ ACCCAAGCCACAGCCCACATCAAGTATTGATA 2223665 28 100.0 32 ............................ TTTACCTTCAGTAGAGAGAATAAAGCGACTTT 2223725 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTTACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAAAGTTGCAGAACATTATTCAGGTCAGTTTAATACGTATGGTTTAAGTAAGGGTGCAACAGTTCACTTATTTTAAAGAATACAGTTTGAGTTAAAGGATAAGATAATACTCTTTGTTTTTAGAATATTAATGTAAATAGCGCGTTTAAAGTAATGTGGATTGTTATGACCGTTAAGTCTGCTTATGGTGCTCTTGACTACAACGGATATTAATTAAATTGACTACGGCAAGTCTAATAATAGTAAACTTGCCCTGGGGCTTCATCGCTTGATGGTCGTACTTGCACTTTAAAAACAATTGTGGTTGTGATCGTTAGTCTCTAATGACCAGACTAGCCTTACTAAAAAACCTCAGCAGTGAGTACATCAAACCCTTTTTTAAGAGGCTGCTTTTAAGTACCTAAAATCAATAGGTTATAACATGCCTCAAAAAAAGGGTATTTGGGTGTGAATAATCAGTCAGCTCTTTAATAGTCAGGAATTCAAGCTTAAAATGTCTA # Right flank : ACAGTGTGTCCCCTCTGCTGGCGTGCGTGACTCTCCCTAGCCCTTGCTGTTAGCCTTTTCCTGCATCATTAATAGTTCAGGAGAAGCACCGTGGAAGCCGACTCACCCACAGATATCCCTTTAACTTTGGAAGACGTCAAGGCTAAGTTTGAAGCCTGGCGGCAGCGTCCTAAACCTCGTAAACCCTTTCCTCATGCATTATGGCATGATGTCTTTCGACTGCAGGAGCAGTATAAACTCACTAAAATATTAACCACATTACGGCTGAGCCGTGCTCAATTAATACATAAGCGTGCGGTATTATTAGGGGAACCCGATTGTCTTGCAGAGAAAGCGCCACCTAAACCATCGCCATCCCGTGCATCTGTGGCAACTGATTTTATTAGCGTCGATCTTACCTCGACGACAGGTGTGGTTAATCATCAGGATAACAAGCCGTCAGTATCACCGATGGTATTTGGCATTGAGTTAACCCGTCCTGATGGCACGGTCTTAAAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //