Array 1 238340-242182 **** Predicted by CRISPRDetect 2.4 *** >NC_015681.1 Thermodesulfatator indicus DSM 15286, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 238340 30 100.0 36 .............................. CTAACTCTACTTTCTTTTTCCCCTGCTGTTTTGTAG 238406 30 100.0 36 .............................. TTATTTTGTAACTTTTCTTGTATCTCATCCCAACCA 238472 30 100.0 37 .............................. AAAATCCTTGATAAATTCCTGCTGCTATTCTTCTTAG 238539 30 100.0 37 .............................. AACAATTAAAAAATTCTCCTGCTCTTTCCCCTCCAGC 238606 30 100.0 37 .............................. GAAGGTTATAGAGCTTTGATTTCTTTAGTTAAACAGG 238673 30 100.0 36 .............................. TTAGATTTAAAAATTAAGGTAGCAGTTAAAGAAGGA 238739 30 100.0 36 .............................. TGGGCAACAAATATTTATAAAATCACGCCCCACATT 238805 30 100.0 36 .............................. ATAGAATACAGCTAAGAAGAATAGCAGCAGGAATTT 238871 30 100.0 36 .............................. GGGCTTTAAGAGAAGACTTTGGAAAAGTGGTTGGAG 238937 30 100.0 37 .............................. AAGTCTCAAATATTTAATGCAGTTAGCACAGTATTTG 239004 30 100.0 38 .............................. TTCCCTTAGAGGGACAGGTTATGTGGTAATAAAATCCT 239072 30 100.0 36 .............................. CTAACAAAATCTCTCCACTTTCTCATAAAAACCTCC 239138 30 100.0 37 .............................. ATAGACATAAGTGCGTGGGGGACATACCCATTTGCGT 239205 30 100.0 37 .............................. GACTGATGGAACATACGGCCTCCATTCAAGCTCTCCC 239272 30 100.0 37 .............................. GGGGGTGTGGGTGAGGAAAATAGAAAAAAGAGTACTG 239339 30 100.0 37 .............................. CAAGAACTTATACTTTTTAGGAAAATGTTTCTTAGCA 239406 30 100.0 37 .............................. TCATTATTGAGGCTGACACAGCACGATGCGAAAGCCC 239473 30 100.0 38 .............................. TCTTCCTGCTTTTTGGTTTTTGGATATTTTTGGTTACC 239541 30 100.0 36 .............................. CGATTTCCGCGGCTCTAATACTCCATGGCGGAGCAT 239607 30 100.0 37 .............................. GGTAGCGTTCAAGGGCTGTTGCGTCAAAGCCTTGCTC 239674 30 100.0 38 .............................. GTGCGTAACGCCTGAACATTTACCCTGGCATCTGCACA 239742 30 100.0 36 .............................. TTGATATTATTAGTGAAAATCCTTACTCATTGACTC 239808 30 100.0 37 .............................. ATATCCAATAGTTATTATTCCTATGACTTCATCTCAC 239875 30 100.0 38 .............................. ATGGCAAAATAACGGGCCGCCCTTTCTGCAGCCAGAGT 239943 30 100.0 37 .............................. TTACCTAACCTCTATAAATTTTAGCTTGAACGAAGTA 240010 30 100.0 36 .............................. ATTAAACTAATTTGGTTAGCAAGAAAACACACCACA 240076 30 100.0 37 .............................. TAATCATATTCAGATAAGGCCTCTAACAAAGGAACTA 240143 30 100.0 37 .............................. TTTGGTGGCCGTCATACCCTCCGACTATTTTCACTTT 240210 30 100.0 36 .............................. TAAAATGTTTTATCCCCTGCCTAATAGTTCCCTTGA 240276 30 100.0 37 .............................. AAGCTAAACTTCGGGACTTGTGAAATAGTCATATCGA 240343 30 100.0 37 .............................. TTTCTTCTATGCTCCGCATTATTTATCCTCCAATAAA 240410 30 100.0 37 .............................. TCGCCACCAGCCCGGATAATACGGGCATTCTTCTAGC 240477 30 100.0 37 .............................. TCGCCACCAGCCCGGATAATACGGGCATTCTTCTAGC 240544 30 100.0 37 .............................. TTTTGCCATCGGTCAGGTGCCGGTGGCCGTCCAGGTA 240611 30 100.0 37 .............................. TAAACTCTGCTTTGGTTAACCCTAGGCCCGCCTTTAC 240678 30 100.0 37 .............................. TTACCAGACTTTTGGTTAATATTATTAAGCTCGTTCT 240745 30 100.0 37 .............................. AAAGATTGAGCATCAACAGCGTTAATAATAATGTTGT 240812 30 100.0 36 .............................. CTTTATTGGTAAAATTATCAATTGTAGAGGAATTGA 240878 30 100.0 37 .............................. GAAGGACAATGCAAATAATACTAACCGAGAAACCAAG 240945 30 100.0 37 .............................. CTAAACCTTCTGCACTTCTTTGAATTAAAGCCACTGG 241012 30 100.0 37 .............................. GATATGGTAATGGAGAAATGAAAACAACAGCGTATTT 241079 30 100.0 37 .............................. AGCATTTTGGTGAGGAATTTGAGCGTTATATGGGAGT 241146 30 100.0 37 .............................. TTTTATTATTCATTTCCCCCTTTTTCTATGTATTCTT 241213 30 100.0 37 .............................. TTTTATTATTCATTTCCCCCTTTTTCTATGTATTCTT 241280 30 100.0 37 .............................. TAATCCCACCGGAGTGGTTCCGGTTCAGCAATGCATA 241347 30 100.0 38 .............................. GCGAAACGTCTGGCTTCAAGAGGGGACAACCTGATTCG 241415 30 100.0 37 .............................. TCGGCACCCACGAGGCAGGAATCTGGCGAAGAGTCGG 241482 30 100.0 37 .............................. AGCATTTTGGTGAGGAATTTGAGCGTTATATGGGAGT 241549 30 100.0 38 .............................. AAAAGCTTGAGGTAAAACTGGAAGAAGTCTTCCCTCAG 241617 30 100.0 37 .............................. AGTACTAACTAACTACTTTCTTAATACTTAACTAATA 241684 30 100.0 38 .............................. ACCTCATTTCCGAGAGCCTTAGCAATGGCACTTTTACC 241752 30 100.0 38 .............................. ACCTCATTTCCGAGAGCCTTAGCAATGGCACTTTTACC 241820 30 100.0 36 .............................. GGTAAAATTTCTTTGTTACGCATATTCACAATCCTC 241886 30 100.0 38 .............................. CTGGATCGGCCTATCGATGTAATTTTTGGTGCCTTAGT 241954 30 100.0 37 .............................. TCGTCCATGAGGGCTGGCACGACCGAAACGCTTCGAG 242021 30 100.0 36 .............................. TTTGAACGAGCTCATGCGGAGGTTCAAAGGGAAGGA 242087 30 100.0 36 .............................. TTTGAACGAGCTCATGCGGAGGTTCAAAGGGAAGGA 242153 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 58 30 100.0 37 GTTCACAGCCTAACTAAAAGGAATGGAAAC # Left flank : GCAAAGTTTCTTATCGGCGGCTCATCAGGCTTGAATGTTACAAACTTTATCGCCATTTTCTGGGAGATGAACTTTATAAGCCCTATGTGAGGACGCGCTGATGTTCGTAATTTTGGTTTACGATGCCGGCGAAAAGAGAGTGCAGAAGTTTCATAAGGCCTGTAAAAAATTTCTCCACTGGGTGCAGCTTTCCGTATTTGAGGGAGAATTAAGCAAGGCCCAGCTTGAACAGCTAAAATTTGAGCTAAAAGCCCTCATGAAACCTGAAGAAGACTCGGTGATTATTTATACTTTCCGCACCCGGCACTACTTTTCGCGAGAGGTAATGGGTAAAAAGAAAGGAGACCCTGACAGCATTTTCGTTTAGCCTCTCCAGCCGCCGGACGGCCGAGTATTTTTGCACTACTAGGGGTTAAGCGGCTAAAACGCAACTTTCGGAAGAATTGACTTTTCCTGAAACCCTTGGTATTTAAGTCTAAAATGCTCTTTGAACTGATTGG # Right flank : CTGGCCTTACGATAACGGAAGGCGGCTCTGAGAGAGGGTTCACAGCCTAACTACTAAGGGGAGCACTAAATAGGCGACAATTGAGTCATTTTGCGAGCGAAGCGAAGCAATCCCTGAGACTGCTTCGACCTCTAACGAGGCCTCGCAGTGACAGCGAAGGTTACTTTGCTTTAGCGATTATGTAAGCGGCGATACTTTGTCGTGTAAAACACACTCGGATTAATATTACTGGGAGCACTTTTTAGGTGACACTCAGGCCTCATGATTACAAGCTTTTAGAAGCTGAAAATGTCATATATTTGATGACCCCATCCTGTGAAAACATCGACCAATAACCACCAACTCTAGTTCAAGAGAGATTCCTGTGCGTGGTCAAAGCCTACAATTTGTTGTGCCTGCTGGTGGTCGGTCAGGTTAATATCGCGCTCTTTGGCTTCAGTGGGGGCTACGACCTTACCTCGCTGTTTTATGCCGCTACCACTTTATACCCAAGTCTTTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACAGCCTAACTAAAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 918034-919769 **** Predicted by CRISPRDetect 2.4 *** >NC_015681.1 Thermodesulfatator indicus DSM 15286, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 918034 37 100.0 43 ..................................... TGGTTAGGTAGTCGTGTTCATACACGACTACCCGGTAGTTAGG 918114 37 100.0 40 ..................................... AAATAATGTTCATAAAAACAAGATTCACAACATGGTTCAT 918191 37 100.0 39 ..................................... TGTGTTTTTTGGCCCACAAAACGGCTTTAGCATCTAAAT 918267 37 100.0 39 ..................................... TCTGAAGCCAACTGGCTCGACAATATAATATACATTTAT 918343 37 100.0 40 ..................................... ATTAACACACTCTTCACAAACTACACCAAAACCTTCAACA 918420 37 100.0 38 ..................................... TTTATTGTTACTTTTTCATTTTTATTTATTGGTAACCA 918495 37 100.0 37 ..................................... ATGAATTTTTTATCAATTACATCTGAAAAATCAACTA 918569 37 100.0 40 ..................................... TCAACATCAGCTAAGAAACATCTGACAACAACCTCTTCAC 918646 37 100.0 43 ..................................... AGGTAATAGAGCTCGTGGTCAACCTTTCGTTCTAAGTAGTCCT 918726 37 100.0 40 ..................................... TCGAGGCTGTTTATTTTCGAATTGTCAAGCCACCTTTCCT 918803 37 100.0 39 ..................................... CCTGGGTATTGAGGGCAATCCAATTGCATCCCGTAATTT 918879 37 100.0 43 ..................................... AGGTAATAGAGCTCGTGGTCAACCTTTCGTTCTAAGTAGTCCT 918959 37 100.0 40 ..................................... TCGAGGCTGTTTATTTTCGAATTGTCAAGCCACCTTTCCT 919036 37 100.0 39 ..................................... CCTGGGTATTGAGGGCAATCCAATTGCATCCCGTAATTT 919112 37 100.0 43 ..................................... CTTTGAAAATCCTCGGCCCCGTTGTGATTTTCCCTGAAGACCA 919192 37 100.0 42 ..................................... CCAGCACCTCTTCCTCATCAAGCTCATCCGTACTAGCGAACC 919271 37 100.0 40 ..................................... GCCTTGTCTATCATGTTTTCGGTGCTGCTGAAGACAACAA 919348 37 100.0 39 ..................................... ATGTTCCTCTACGATATCATGATCCACAAGAGTTAGTTT 919424 37 100.0 38 ..................................... ATTGCTTTAAGATATCATATTGTTTATTTATGAATAAA 919499 37 100.0 44 ..................................... CTTGGTTTATTTCCCATAAAAATTCAGTATCGTTATTTTTTAAC 919580 37 100.0 39 ..................................... ATGTTCCTCTACGATATCATGATCCACAAGAGTTAGTTT 919656 37 100.0 40 ..................................... GTTGGGGAGTTGTTGTCGTTTAAAATACTTTAAATACCGG 919733 36 91.9 0 ..............................-A.G... | G [919766] ========== ====== ====== ====== ===================================== ============================================ ================== 23 37 99.6 40 GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC # Left flank : GTAGCTCCTGTTTTCTACGTTGCTTTTCGGCCGTTGCGGTTTTGTTCTTTTTGGTCTCTGTGGTCCTTTTATTAATGAGTCATTAAATAGGCGACAAAATACCCGGTTATTGCGAGCATTTTTCTGGTCATTGCGAGCATTTTTCTGGTCATTGCAAGCATTTTTCTGGTCATTGCGAGCGAAGCGAAGCAATCTCCATCCCACGTGCTAGTAAAGGTCTTGCCAGACCGCAAAGTAATATCGGCAAAAGCAACCCCTGGCCTTTCCGGTCAGGGGTACCCTATTTTCACGCAAATTTATAAGTTTGCTATTTATCGTTATTTTTGGAAAAGGCTATTTTGAACCCTGACCGGTTCTGGAATCCGTTGGTATTCAAGTGTTTCGGGTGGTTCTTGAGTTAAATAGTAAAGTTTAAAAAGTGGTTTTTGGCAAATTTTCGCTGAACCTTGACCTGAGCCGTCATCTAACTCTAGCAGATAACGCCATTTTTAAGGCCTGCA # Right flank : CAGGCCCCCTGGCCTGTCCCTTACAAATTGACGGGCCCGGTAATATGGTAGATGGCTGATGGCTAATGGAGAGAGACTGCTTCGCTTCGCTCGCAGTGACAGAATGGTTGATGCCTGATGGCCAATGGCGAGAGATTACTTCGCTATGCTCGCAGTGACTGGATCTTACAATTCAATATCCCCTAACGTTAAGTTGTTTCCAGATGTGAAAGTAGTTTATAAGCTCGAGCGGTCTTCTTGAAATAGGCCGCTATTTCGCGAGGGTCATCGAGCACCGTGAAAAGATCAAGATCTTCTCTGGAAATCATTCCCTCGTGTAGAAGTCGTTCTTTTATCCAGGTAACTAATCCGTGCCAGTACTTGCTTTCTACCAGTACAATGGGCACTGGCCTTATTTTATGTGTTTGCACTAAAGTAATAATTTCAAAAAATTCATCGAGGGTTCCATAACCCCCCGGCATACATAAAAGGCCTACAGCATATTTAGCCATCATTACTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 3 1410352-1414258 **** Predicted by CRISPRDetect 2.4 *** >NC_015681.1 Thermodesulfatator indicus DSM 15286, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================================================================================================================================================================================== ================== 1410352 37 100.0 40 ..................................... ATTATCAGAGTAATATGTATACTGTTTTCTGAAGCCAACT 1410429 37 100.0 40 ..................................... ACATAAGCCCGCTCTCTTCGACCTCCTCGAGATACTCCTC 1410506 37 100.0 41 ..................................... TGCCTCTCCTTCCTCAATCCAGAGTTCGAGGCTTCCGCCAT 1410584 37 100.0 39 ..................................... AATTTAACTTTTGCCAAATACTCTTTTTTCTTTTCCATC 1410660 37 100.0 40 ..................................... CCACTCAATGAGAGCGGATGGCTTGTCGGAGACGACTTTT 1410737 37 100.0 39 ..................................... TCAATGAGAGCTGGTAATTTAACAAATAAATTATTTCTT 1410813 37 100.0 43 ..................................... CCCTGGCACAGTCGGGACAAACGTTCATATAGTGACCTATTAT 1410893 37 100.0 43 ..................................... AGTCGTGCCCGATGAACAAAACCACACCTCAATAGAGCCACCA 1410973 37 100.0 41 ..................................... CCCGTAGTTACGGGCTGCTATAGCCAGAGTACTCGGGTTTG 1411051 37 100.0 39 ..................................... ATTACTTCCATTTCTTTACCTCCCTTTTCTTATTTTACT 1411127 37 100.0 42 ..................................... GGACTCACAAAGAGAGGTCCTTTGAAAATCCTCGGCCCCGTT 1411206 37 100.0 39 ..................................... TCTTAAGAAAGGAAGCTGTTGCTTCTTTTATTTTTTCTC 1411282 37 100.0 42 ..................................... TTCTTTTCCATCTCTCTTTACCTCCCTTTTCTTATTTTACTT 1411361 37 100.0 42 ..................................... TTTTTCCATAGCGCTGCTCCCCTTTTTTTGCTTAACTTACTA 1411440 37 100.0 37 ..................................... TCTATAAAATAAAATTGAAGCTCTGCCTTTCCATTTC 1411514 37 100.0 43 ..................................... CCCCGCTCTCCCTTCTTTCCTTGTCCTTACGCTACATTGTAAG 1411594 37 100.0 38 ..................................... TTGGAGACACTCGGGGCATGCATAACTAAAAGAAAGGT 1411669 37 100.0 38 ..................................... GTTGATTACTATTAATACTATTTTTTTCATTTTTTCCT 1411744 37 100.0 39 ..................................... TATAACCATTGTTTTCTAATACCTTATTAATGACACTAG 1411820 37 100.0 40 ..................................... AGTCCTGAGGCCTTCGGTAAGAACAAGAAACAAAAAAAGC 1411897 37 100.0 39 ..................................... GAGACGACCTTTACGGTCGTCCCGGATACATCAAACCAC 1411973 37 100.0 40 ..................................... GTCTCACAAAGAGAGGCCCTTTGAAAATCCTCGGCCCTGT 1412050 37 100.0 40 ..................................... CAGACAAGCTGGCTCTCAAAATACGCCGTTTGGCGGAGAT 1412127 37 100.0 41 ..................................... CCTTAGCAGGCCTCCAGGCCTTGTCAGGAAACCTCAGGACC 1412205 37 100.0 38 ..................................... TCAACATCAGATAAATAACACTTCACTATGTATTCCCT 1412280 37 100.0 39 ..................................... CACACAAGACCATCATTCATTCCAGCCACATAGGTCTGG 1412356 37 100.0 40 ..................................... TGGCAATAGGTAAGAGTCCAGTTGCTGTGGCCAGTAAGCT 1412433 37 100.0 41 ..................................... AAACCACAACACAACTGTACTGTTCCTTAGCCTCTCAATAC 1412511 37 100.0 38 ..................................... ACTATCAGCCAATTTAACTTTTGCCAAATACTCTTTTT 1412586 37 100.0 38 ..................................... AACTGTGTATTCCACATTGTCTTCTAACCTAACTGCTG 1412661 37 100.0 45 ..................................... GTAGCATGGTGATTTACTCGAAATATTACTTTGCCCAGCCAGGAC 1412743 37 100.0 41 ..................................... TATACTCTTCAAACTCGCCATAGAGCTGCTTCAGCTCTATG 1412821 37 100.0 41 ..................................... AGGTCATCTTCTATAGAAAAACTGTAAAAAAGTTTAAAACA 1412899 37 100.0 42 ..................................... CACTTCTTCTTCCCAAGGACATTCGACTCCTGCAGGCTTCTC 1412978 37 100.0 40 ..................................... TGCGTTGCAGGGTGGTAAAAAACGAGCCATTCTGAGCCCT 1413055 37 100.0 40 ..................................... AGTTGTCGCAGGTCCATAGGACGGCTGATTCCCAACCGTG 1413132 37 100.0 43 ..................................... TCTCTCTTCTCGCTCCTGCAACGTAATGCCGTTAAGGTGTTCG 1413212 37 100.0 43 ..................................... TTGGTCCAAGGGAACACGAAATACTTAAGTCTTCCTCAATAAC 1413292 37 100.0 39 ..................................... TCAATGAGCCAATCTATTATTTCTTGGCGGGAGAGCATC 1413368 37 100.0 42 ..................................... TAATTACCCTCAACGACCAGGACTCCGCCGTCCTGGTCAAAC 1413447 37 100.0 40 ..................................... CCAGTTATGTCCACAACTTCTTTGTCTATCTTGTCTATCA 1413524 37 100.0 40 ..................................... CCAAGGCTAGCCCAAGGGCCTTTCTATTCTTCGTATGCAT 1413601 37 100.0 42 ..................................... CGACTTCGTCTCTCATGGAAAGCTTATGCTTTCCAACAAACC 1413680 37 100.0 41 ..................................... AGAGATATTGTCCTGTCCAGCCAGGACGGTGTCGTCCTGGA 1413758 37 100.0 37 ..................................... AAAACACCATATTGTTTATTTATAAATAAATTAACTC 1413832 37 100.0 40 ..................................... ATGCCGACACAACCAAAACAAATTCATCGGTGGCAATCTT 1413909 37 100.0 42 ..................................... ACCTCCTTTTATTTTTGATTTATTCCCGGAAGTTTCCAGAGG 1413988 36 91.9 195 ..............................-A.G... AGGCCCCCTGGCCTGTCCCTTCCAAATTGACGGGCCGGCAGTATGGTAGATGGCTGATGGAGATAGACTGCTTCGCTTTGCTCGCAGTGACAGAATGGTTGATGCCAGATTGCTGATGGTAAAAGCCTACGCCCCTACTTTGTTCACACTCACAGTTTTTTCAGTTTTTTTACCATCCCCTATTCACTATTCACC G [1414021] 1414220 36 83.8 0 .C.....TG.....................-A.G... | A,C,G [1414223,1414226,1414255] ========== ====== ====== ====== ===================================== =================================================================================================================================================================================================== ================== 49 37 99.5 44 GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC # Left flank : GGGGCGAAACAGACTCTTAATTAAAGCTTTTCCTAAAGGGCTTAATAATGAAAAAAATCTTGATAAAAAAGCTAATTTGAGAGAAACTAAAAGTGCTCTTTGAAAATTGAATAGGGTAATAGGTGCTGCAATTAATTGGCCACTAATTATTCTTGCGAGTTTCTTTTTTTGGTCATTGCGAGCGGAGCGAAGCAATCTCCATCTCCCGCGCTACAAAGAGTTTCGCCAGGCCGAGAAGCAAACTTGACCAAAACCCCTGGCCTTTCCGGTCAGGGGTACCCCATTTTCACGCAAATTTATAACTTCCCTATTTATCGTTATTTTTGGAAAGGCTTATTTTGAACCCTGACCGTTTTCGGAATTCGTTGGCTTTCAATGGTTTCAAGTGGTTCTTGAGCAAAATAGTAGAGTTTAAAGGGTGCTGTTTGGAGAATTTTCGCTGACCCTTGACCTGAGCTGTCTTCTAAGTTTCTTAGATAACGCCACTTTTAGAGCCTGCT # Right flank : CAGGCCCCCTGGCCTGTCCCTTCCGAATTGACGGGCCGGCAGTATGGTAGATGGCTGATGGTGAGAGACTGCTTCGCTTCGCTCGCAGTGACAGGATGGTTGCTGGCAGATGGCTGATGGCAGATGGCAGAGACTGCTTGGCTTAGCTCGCATTGCCAGAATGATAGATGGCTGATAGCAGAGGGCTGCAAAAATTCAGATTATATATTTCCAGGGCACCAGCGCTATATTCGGAGCTATTTTGACGAATTCTTTACCCTGATAAACAACCAGGCCAAAAGGGGCTTTTTCCTTAAAGTCTTTTAAAAACTGTTTTAAACCGGCCATTTTTTTAAGGGAAACCGTGGCTGAAGCTTTTATCTCGATAGGGATTAGTTTCTCGCCAATTTCAATTACCAGGTCAACTTCTGCGCCAGCGTGAGTTCGGTAATAAAAAAGACGAGCTTGAGGTTCAAAATAGGCCAGGAGTTTAGCTATTTCTTCCACTAAAAAAGTTTCTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //