Array 1 97-716 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLQE010000025.1 Eubacterium sp. MSJ-13 M-13_ctg0298, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 97 30 100.0 35 .............................. ACTATACCTTTAAAAGGTGATTTACATTCTGTATC 162 30 100.0 35 .............................. GAAACAGCAAAGTATCACGGATTTACAATTAAAAA 227 30 100.0 36 .............................. TGGAGCGAAATAACAAAGGGTCTTGGGTGAGTTAGA 293 30 100.0 37 .............................. TGCTGACACCATGTCTTACTGAAATTCAGTGTATTGA 360 30 100.0 36 .............................. AAAAGCAGATATATTAAAAATCCAGCGGATATGCAG 426 30 100.0 34 .............................. TCAGAGCAAATGCCCGAACGCAAAAACAATTATA 490 30 100.0 36 .............................. GGTTTTAGGTTTAGAAGAAGCTAATTCAGTTGTTAG 556 30 100.0 35 .............................. AGTGTACCTAGAGTTTCAAGAATAGGTGCTAATTT 621 30 100.0 35 .............................. AAGAAGTGCTGATTCTAAATTGGTATAAATATAAT 686 30 76.7 0 ................ACAA.A....TT.. | G [701] ========== ====== ====== ====== ============================== ===================================== ================== 10 30 97.7 36 CTTTACATCCCACTATGTTTCTATTAAATC # Left flank : TCGGCTTTGCCTGGTCCCCCATTTCAAATGGGGGATTTAAAGCATTATTCATTAAATCTATCACTCCTTTTCCTCCACAAGAATGTACTCTTTCATC # Right flank : CTAAACTACTATTTCTCTTAATACCTTTTGCACTTCCGCAGATTGTATTAACATACGCATTTTCATATTTCCTGACTTAACATTTGGTTGTCCACATCTGATACTGTCTTTATGTTCTGAAATGCAACAATCCTCATACCAACATTCACCCATTTCTTTCCCTTTTATCGACCATCTTTCATTTTCTGTTAATTCCCCGGCTAATGATTTCATTACTCTTTCCGTAGAAAACCTCTTAAATCCTGCTAAGTATTTTAAAGTTTTCTCGTCTTGTATTTTCGCTAAATTAATATGATGATTTTCTATTGTTCTCAGTATCTCCATACGCATCTTTACCTTATCTTTTTTACCTGTCCCTGTCCATTCCACAAGTTTATCAAAAGCTAAAATCAGATATTCAAAGCAAATCATATCAAGTATTACAATGTGGTTGTCTGATTTAGCTGCATATGTTCTGAGTAATCTATATTTATTCCGAATATCCTGATTATCAACCACAT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACATCCCACTATGTTTCTATTAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 6832-7090 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLQE010000058.1 Eubacterium sp. MSJ-13 M-13_ctg0460, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ====================================== ================== 6832 38 100.0 35 ...................................... AGTATTGTTGCATGAGATACAATTAAAATGTTTTC 6905 38 100.0 34 ...................................... CTTATCCTTTCTTTTAAAGTTTCAATATCCACAC 6977 38 97.4 38 .....................................C TTTCTTCCATTGTTAATGACATACCAGAACCAGATGGT 7053 38 94.7 0 ............................A...A..... | ========== ====== ====== ====== ====================================== ====================================== ================== 4 38 98.0 36 GTGAAAATGAAGAATAACCGAGAATAGCGGTTGCAAGA # Left flank : TGGCTGATGAAATGGTGGCACTTTCAACGCAGAAGATTCTTGAGAAGTCGAGCATGTCTATGTTGGCTCATACGAATAAGTTTAAGAAAGGCGTATTTAGGGGCATGATATAGCTCATTCAAAATGTAATTATAAAGTAGTAAATGATAAGAGTTATGTTGAGTTCATTGATAAAAATAAAGCTGTTGGCATCGGAAAATGTTCAATAGAAATTTTATATCAATCCCTGCGTCAAAATAGCCACAGCGAAATTTATTCAAAATTATTCTTTTCATTTTTACAAAAAGGTGATATAATCAAAATATTAAAAATAACGAGAAAATATGAACAAATTGTAAAGAGACACAAAAAAGGCAGAAAAATCAGTAAAATGTGAGATGTATCTTCTTGAACTATTGTTCAAGAAGCATCCCTCGCTTTCAGCTCGGTCAATTGTCAGACAATTATATGCAAAAATGACTCTGCAAATGCCTTATTTAAGGGCTTTTTCAGATAGTAGA # Right flank : ATTTCTTGAAGCAAGCTGGAGTCTATCTTAGATTTATGAAAAATTTAAAATGTCACATATAAATCCTGAATTATTAGAAAAATAGAATAATTAAAAACAAGTGATTTTGACCACTCGTTGACAAAAAATGACCATTCGTAGCAAATTATCAGAAAACGCCTAAAATTGTGGTATGATGTTTGCATGAATATCAGAAGAAAATAGAAGTATCTTTTGTAGTTCTTATACATGACGAGGAGGTAGACATATGAAATTTACAAAGGTGGATCATATACATGTAGGCGTAGGATTTGAGCGTGATGAAAAAATGGGTCATAGAGGGATGATGTACAAAGAGTCAGGTACGAGTAATGACTGTGTTATAGATGTAACATCTCATGTAAAGGCTCGTTATAATAAAGCGGCTTCTTTATATTCTGTTTTAAATAGAAATGTTAGTATTTTTGATGACACGAATAAGAATAAAATTGCAAAAGAAATAATACGATATTTTTGTGACA # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAAAATGAAGAATAACCGAGAATAGCGGTTGCAAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.53%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 2496-1871 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLQE010000020.1 Eubacterium sp. MSJ-13 M-13_ctg0646, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2495 30 96.7 36 .G............................ ACACCACCTATGGCATTGACATATTCCCTGTAAGCT TC,CG [2485,2490] 2425 30 100.0 36 .............................. TACGGAGTAATGATGTCACTTTTAAAACAATACTCG 2359 30 100.0 36 .............................. AATGTTAATCATTACACCTAATAGACCCATGATAAG 2293 30 100.0 38 .............................. AACTGATATAGAATATGCGGTGACATTGCGTAATACTC 2225 30 100.0 36 .............................. GTAAGTGATTATGAAGTATAGAACGGAGGTTGATTG 2159 30 100.0 36 .............................. TCTTTTATAAGTGGCGAATGGAACAAAAAATTATAC 2093 30 100.0 37 .............................. CAATATCCGTCTAACACATCATTAGAACCACTTGAAA 2026 30 96.7 32 .................A............ GAAACGCTGCAAGAAAAGCTAATAGACACAGA 1964 30 90.0 35 ................T....A.....G.. GCATCAACTTGACAAATTGTTGTATGTTTTCTCAT 1899 29 73.3 0 ......-.........TA...T.A..T.CA | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 95.7 36 GATTTAATAGAAACATAGTGGGATGTAAAG # Left flank : GCACCCGGAGGGTGAAATAATAAACCCCCATTTGAAATGG # Right flank : AAATTTCACGCACAGAAGGAGAAGAATATATGGAAGAGAGAATAACTGGAGTAATGATTTATTATTATTTCGTGTGCAAGCGTAAGCTATGGTATTTTTGTCATGAAATTAATATGGAATCAGGTAACGAGGATGTACAGCTTGGAAAGATTTTGGATGAAACAAGTTATGGAAGGAGTGAGAAACATATTCAGATCAATGGTGAGATTAACATTGATTTTATAAAAGAACATCATGAATTACATGAGATTAAAAAAAGTAAGTCAATAGAGCAGGCAGGAATATGGCAGGTTAAATATTATCTGTATTATTTAAAAAAGCGTGGAGTAGATGGATTAAAGGCAAAAATAGATTATCCATTATTAAAAGAAAATGTTATGGTTGAATTATCAAAAGATGACGAAATTCAGCTACAGTGTGTGATTAAAGATATTGTTAAAATGAAAAGGGAAAAAAGACCTCCGATTATGAAGAAAACAAAATTGTGTTCAAAATGTGCA # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTAATAGAAACATAGTGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //