Array 1 81112-79004 **** Predicted by CRISPRDetect 2.4 *** >NZ_QOCT01000001.1 Lactobacillus bombicola strain L5-31 L5-31_S84_L001_R1_001_84__paired__contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 81111 29 96.6 32 ............................C ATGCTGGTAGGTAGACCAGTCAGAATTAAAAT 81050 29 100.0 32 ............................. ATTGCAAAGTGCGTGGCGTGATTCGAGAAGGA 80989 29 96.6 32 ............................C TTTATGAATTTGCTTGGCAGCAATTAGCTGCA 80928 29 100.0 33 ............................. ATCACAGGGCTGGAAGTTGAAGGTACCCAACAA 80866 29 100.0 32 ............................. ATTCTAGTCGGGCAACTGTTTACATGGCAGGT 80805 29 100.0 32 ............................. GATTAAATACCCTAAATTTTCATGATTTAGAA 80744 29 100.0 32 ............................. GAGTGGATAGCTCCTGCAGCGTGATATACAAA 80683 29 100.0 32 ............................. TATCAGTACGCGCAACTAGTGAATTCATTGAT 80622 29 100.0 32 ............................. AATTGCATTCAGATAGCCAACCCCAAGTAGCT 80561 29 100.0 32 ............................. ATCCTATTCTAAAACGAGCAACTGATTTCTTC 80500 29 100.0 32 ............................. GAATATAGAATTAAAATATTTAGCCAGCAATA 80439 29 96.6 32 ............................C TTTATGAATTTGCTTGGCAGCAATTAGCTGCA 80378 29 100.0 33 ............................. CTTTATAATCTACTCTCACAGGATCAATTCCTA 80316 29 100.0 32 ............................. ACTATGTTCCAACCAAGAAAATACAAGCAGAG 80255 29 100.0 32 ............................. CCAAGGATAACTTTGCAACTCTTTCATCAATG 80194 29 100.0 32 ............................. TATTTTGTTGCCATCATCTGAACTAATATTGG 80133 29 100.0 32 ............................. GAGTTTGGCAAAGAGCCAATTAGGTGCATCAG 80072 29 100.0 32 ............................. TGATAAGTTTCCAAATCACAAAAAAAGTTTAT 80011 29 100.0 32 ............................. GTTTCAGGCTATCTTATAGTCATTAACTACAG 79950 29 100.0 33 ............................. AAACAAATTTATTTGATACCCACACCTGTTTGA 79888 29 100.0 32 ............................. TGATAAGTTTCCAAATCACAAAAAAAGTTTAT 79827 29 100.0 32 ............................. GTGGGCGGTGATGATTTTGTTGTAGCACTTGA 79766 29 100.0 32 ............................. GAGTGGATAGCTCCTGCAGCGTGATATACAAA 79705 29 96.6 33 ............................C TTATGGCAAGGGCGCGCTAGGACTAAATTTACA 79643 29 100.0 32 ............................. GCACTTATTACGACTGGAAGCACTTTGTTATT 79582 29 100.0 33 ............................. CTTTATAATCTACTCTCACAGGATCAATTCCTA 79520 29 96.6 32 ............................G CTTCGCATGGTAAAAATAGTGCAGAAAAAAGA 79459 29 100.0 32 ............................. TTCCTCGGGACTTCAAACAAGTAATCTTAATA 79398 29 100.0 32 ............................. TTCCTCGGGACTTCAAACAAGTAATCTTAATA 79337 29 100.0 32 ............................. TTCCTCGGGACTTCAAACAAGTAATCTTAATA 79276 29 100.0 32 ............................. ACCTGTCATCTGTCATGCGTGGCGAGCAGAAA 79215 29 96.6 32 ............................C ATATAAGTTACATCTTGATTAGCACGATTATA 79154 29 96.6 32 ..........................T.. CTTTCTCTTTTAGCAGAGCTTTATAGTCTGCT 79093 29 100.0 32 ............................. TGAGTTAGCCGATTTTGCAAATCGCGTAGTTC 79032 29 86.2 0 .............A......A..A....C | ========== ====== ====== ====== ============================= ================================= ================== 35 29 98.9 32 GTGTTCCCCACGTGTGTGGGGGTGATCCT # Left flank : GATAAAAATCAAATTATTTCTATTGGAGCAGTTAAAAAAATTAATGATAAAAAGTATGATAGTTTTTATAGATTAATTAAAGTTGATACTGCAGTGCCAAAGACGATAACTGAATTAACCGGCATAACATTAGAATTATTGAAAAAAGAGGGGGTTACTTTAGATAGAGCTCTTAGAGAACTAACTGAGTTTATTAGTTCTGCCACGATTATTGGCTATAATTTACAGTTTGATTTATCCTTTCTCATGTCCGGCTATAGATTTGTAAATTTAAAAGAACCGGATAATGAAACTTTAGATTTATTACCTGTAGTTAAAAAAGCGGAAAAATTTATTGATAATTATCGTTTGGCAACTATTTTAGATTTTTATAATATTAAGAATTCCAAGCCACATAATGCACTATCTGATGCTAAGGCTACGTTGCAGTTGTTATACAAACTAATGGAAAATGGCAATATCAAAGTTTAAAAATAAGGGTATAACAAGGATTTTTTACT # Right flank : GACAATGGTCAAAACGTATTGATGAACTTAGTTGTGTTCAAAGTGACTTGAATCAGGTTTTTGTTGGTAAAAATGTTGCCTAATATGCTCTACAACTTTAGATTATGTGCTAGATTTGGTGGTCTAATTCTTGGCTAACGATTTTTTGATCACTTAATTCAACTGCTAATGCAACTCTTTTATTTTTTTGTTGCAGAGTTAAGGTTTGAATTTGGTCAACGTCACGATAGCCTGCTGGTATTCGTGGACGTTTTTTAATTGATTGGTTAAGCCTGGTTCGCGTTCAATGCCGTATTTATGCGCTAGTTCAGTTAGGGCAAGAGAGGGCGTGACTTAACGGTTACTGCCCGCTGTGCACCTCTTAAATGCGCCACAGGGGGCGAAACAGAAAAAGCTAGCACCATTTCTGCTTAATTCAATTTTGGCAAAATTGTATAAGGGTCAAAATTTCATGATAAAAAATAAGCAGGAGGGACTAATGCTTATTTTTATCGTCCGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //