Array 1 1200561-1201627 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044527.1 Klebsiella grimontii strain SS141 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1200561 29 100.0 32 ............................. CTGCCACCCATTCGTTAACCAGCCAGACACCC 1200622 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 1200683 29 100.0 32 ............................. ACCATTCTCATCATTCACGGCACGCAGTTAGT 1200744 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 1200805 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 1200866 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 1200927 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 1200988 29 100.0 32 ............................. CCTATAACCGACGAAGGCAAGCGCCGCGCACG 1201049 29 100.0 32 ............................. CCAGTTAGCCGCACTCTTTAATTGATCTGCGC 1201110 29 100.0 32 ............................. TAGCCCCTTCGAGTGACGGGTATTCCTGACCG 1201171 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 1201232 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 1201293 29 100.0 32 ............................. GGTACTGCCCTGCACTGTCTGCTGCTGGAGCC 1201354 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 1201415 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 1201476 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 1201537 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 1201599 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 18 29 98.9 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1883686-1884691 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044527.1 Klebsiella grimontii strain SS141 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1883686 29 100.0 32 ............................. TCAGTAGTGCGATAGCGCCACGCTACCGGCTC 1883747 29 93.1 34 ..........A.................T GATAGCTCCAATATTCTCTGTCTGCGCGGCAAGC 1883810 29 100.0 32 ............................. GCCGCAATGGACAGTGAGCCGGTGGCAGAGAT 1883871 29 100.0 32 ............................. TAACAGCCGGAGATTTTATACAGTCCACTTTC 1883932 29 100.0 32 ............................. ACTGCCGTCGGTCATATATGCGGTGACATATA 1883993 29 100.0 32 ............................. GTTCCTGCCGTCTGTAGGCAGCGCTAAACTCT 1884054 29 100.0 32 ............................. TTACCTTTGTCGCTTTTACAGAGGCAATGGAC 1884115 29 100.0 32 ............................. CCGGTATCGCATCGTTTTGCTTTTACAACCTG 1884176 29 100.0 32 ............................. GCCGCTGGCAGGTGATGCGGCGCGTTAGCGAT 1884237 29 100.0 32 ............................. GGATGCCTGCCGCGCCGCCATGCTGCAGGAAC 1884298 29 100.0 32 ............................. TACAACATGCTGGCGCAGCGGCATACCATCAG 1884359 29 100.0 32 ............................. CAACCTGTGTGCGCATAGCCTTGATCGCTTTC 1884420 29 100.0 32 ............................. CGTAACGCAAATTCAGGCAGATTATTTAACCC 1884481 28 96.6 32 .............-............... ATTGATCGCGCTTTCTCGCGCATCTCAGAAGA 1884541 29 96.6 32 ...............A............. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 1884602 29 96.6 32 .............T............... AACAGCCCACAAAACTTTTTGCATGGGGCCGC 1884663 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================== ================== 17 29 98.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGCGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCCTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //