Array 1 28137-28332 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NYJK01000016.1 Helicobacter pylori strain HP16055 HP16055_Contig_16, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence         	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	========================	====================================	==================
     28137	    24	  87.5	    30	...C......CC............	GTGTCGTTATTAAAGCTAGTATTGTCATTA      	G [28140]
     28192	    24	 100.0	    33	........................	TTGCTGTTTTCAAAAGTGGATTGGGTGCTATTA   	
     28249	    24	  87.5	    36	..G.G......C............	CTACTATTATCAAAGCTTGAATTGGCGCTGTTACTG	
     28309	    24	  91.7	     0	.....G.................G	|                                   	
==========	======	======	======	========================	====================================	==================
         4	    24	  91.7	    33	AAATTATAAGTGCCTTGATTGAAA	                                    	       

# Left flank :   AAACTTTGAGCGTCTTTAGCGATAGCGGTGTTTTGATTCTTGGTGTAGTCTGTATCATTGCTTGCGATCTTATTATCATCAGCAGCGTTATTTAAAGCGCTTTGGGAATTGGTTAGATCCTCTTGATAGGTTTTTTGGGCTTGTTGTTGTAAATTGTCGCCTAAAAATTGGGTAATGATGGATTGTTTGTTAAAGGTTTCTTGTAAGGTTTCATCTTGCCCGTTAATATCAAAGGTTACATCATAAGTGTTATTGCCCACTTCAACATGGCTAATGGCTTTATCGCCCTTATAGTTGATTAGATCCCACAAATAGCTTTGATAAACCCCATACTGGATCGCTCCGTTTGTAGTGAGAATGTCATAGGTTTGATTATTATTAAGGGTTTGATTGAGGTTAAAAATTGCATTAGAACCAAAAGACACACTGCCTTTAAGGCTGGCAAAAGGCGAACTTGAATTTAAAGTGTTAATGCCTGAGAAACTCACCTTGCTGGTATT
# Right flank :  GCTCGTTTGTTTAAAGGAGATGGTGCTGTTATTACTATTACCGCTGAAACTAAAGCCCCCATTCGTGTCATCTGTAAAGCTAGAGTCACTGACCTTGATATTAGAGCCTTTAAAATTCATGTAAGATTTTTGTGTCCCTGCATGGCTGTTATCAAAGCTCGCTTGATTGATAGTGAGGTTATTAGTTGCATTAAAATTGAGCGTGGCCCCACCACCATCAGCGTATGAGTTTCCGGTTGTGATATGGCTTGTCAAGTAAATGTTAGCCGCATCATAAGTGCCTGTGATATAGCCTACATCACCTCCATTAATACCTGTGCCTCCAAAGCGGATATTCCCCCCTATATCAAGCGTGCCGTTATTGAATTTTTGCGTGAAACTAGCCCCACCAGCGCTATAAGTGGTAAGAGTGTTTAAATAATAAGTCCCAGAGCCTTGAGTGCTGCTAAAAAGACAATAGGAGTTGTGCGTGGGTGAATTAGGACCGCTTTCAATATTGT

# Questionable array : NO	 Score: 3.64
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.59, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AAATTATAAGTGCCTTGATTGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [4-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : NA
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