Array 1 7654-10665 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMON01000014.1 Haloarcula salaria strain JCM 15759 sequence14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================================================================== ================== 7654 30 100.0 36 .............................. AACCTCCTGCTCTTTCGTGTAGCCGTACGAGCGCTC 7720 30 100.0 36 .............................. GACTAAAGACGCACTATCAATCTCGCCGCCGGGGCT 7786 30 100.0 36 .............................. TCGTGAGGGTTGACGGGTTGCGGTCAGTGAGTGATG 7852 30 100.0 35 .............................. GAAGTACGGAAACGCGTCGCCCTCAAACGCGCTTG 7917 30 100.0 37 .............................. CAAACTCCTCCGACTTGTCCACTCTCAGGAGGGTGGA 7984 30 100.0 35 .............................. TCTACCCAGATACCATGGAGATATGATGCCCCCGA 8049 30 100.0 36 .............................. AGATCGTCAACGAGGTCGATGTCGCCCCACGCCATC 8115 30 100.0 37 .............................. CGGATGCCGATGTTGCCAGAGTCACTAAAGTCACCAT 8182 30 100.0 38 .............................. ACGCGAAACAAAGACAAGGTGCGAAATTAATGACTCCA 8250 30 100.0 35 .............................. GCGTTCCAGCGCATCCAGCGCGCGGGCAACCGTGC 8315 30 100.0 37 .............................. TCTCAGATGGATGGGTCAGGAAACGGCGAAGATACGG 8382 30 100.0 37 .............................. ATCCACGAGCCAAATGTAGAGGTTGAGGAACTCGCTA 8449 30 100.0 37 .............................. AAGTGCCAAGATATACGCTCTGAGCAAGTCGCGCTCT 8516 30 100.0 35 .............................. TCCTTGTCAAACTGGTAGAAGGCATTGAGAATCCC 8581 30 100.0 38 .............................. TGCATGGCGTGCACGCAGGTCCAGCACCGTCGGGCTGC 8649 30 100.0 35 .............................. TCTTGGCCGAGGTTCCGGAGCTTGATGGGATCGAA 8714 30 100.0 35 .............................. CGAGTGAACCGTCCCGCGTGGTTTGTCATTGTTTG 8779 30 100.0 36 .............................. AGACACGTCGGGTAGCTCGAAGTCGTATATCGATAG 8845 30 100.0 39 .............................. CGACATCGGCGGCGGGACCAACTCATGTCACCACTGACC 8914 30 100.0 37 .............................. TCGCAAGTCGCCGACGCCCATCCGGAGCGGTACGACA 8981 30 100.0 37 .............................. GGCAAGTGGGTCGCCGGAACGTCCGTTGTAGTAGTAC 9048 30 100.0 36 .............................. GCGTGTCCGCCGCCGAGGTACTACCCGACGACGTTG 9114 30 100.0 36 .............................. CTGTCATGAGTGTGGCTTTCCAGCCCGCCATGCTGA 9180 30 100.0 34 .............................. TTTGAGCGTGTGGTACTCGCCGTCCATGTCGATA 9244 30 100.0 37 .............................. TATGGCACTAACACACAATATCAGGGCGACTGTCTCG 9311 30 100.0 36 .............................. ACCGCGGAAGCCGAGCTCGTCTCGGCGATGCAAGGG 9377 30 100.0 37 .............................. GCCCGTCGTTTGTCGAGTGTGCGGAGTAGGGCAGGTA 9444 30 100.0 33 .............................. GGCTTCGATCTGTGCGTCGCGGTAGTCAGCGAG 9507 30 100.0 35 .............................. AGCGAGATTTCCGGCGAGGACTAAAATGCCGGAAA 9572 30 100.0 37 .............................. ACGAACTTGACGCGAGTCGAGTCGTCGAGCTTGTCGC 9639 30 100.0 38 .............................. AAGGACTGCTGTCACCTTGTTGCCCGTGCCGACGCCGT 9707 30 100.0 36 .............................. GCGCGCAGGCTGACGAGACGGTGGCGGTCGCCTACG 9773 30 100.0 37 .............................. CAGCCCGAGTCACGGTCCCGATTGATCGACCAGCAGT 9840 30 100.0 35 .............................. ATCTCCAGCGCATACTCCTCTTGATTGATCTGGTC 9905 30 100.0 35 .............................. TGGGCAACGTGGGGCGATGAGATCACCATGATCTT 9970 30 100.0 36 .............................. GAGCAGCGCACGCGGATCGGGAAAACAGGGGTACGA 10036 30 100.0 38 .............................. CGCAGCGGGCAGGTCCGGAACTTCGAGATCGTCGCCTT 10104 30 100.0 37 .............................. ACTTACGGTGCCTACGTCACAACTCCCGACGAGGAAG 10171 30 100.0 37 .............................. ACTTACGGTGCCTACGTCACAACTCCCGACGAGGAAG 10238 30 100.0 35 .............................. GACCCAAGCGGTGGGTCTGCCCAGACCATCGTCGA 10303 30 100.0 37 .............................. CGCCGGGTGCGGTCGGACACCCGGCCCCTGATTGCTA 10370 30 96.7 38 ........C..................... TCTCATGGCTCGGAAATCCTATCCAGCAGGATTAGTGT 10438 30 93.3 37 ........C...T................. TCCAACAGCGCCCGGAATGCTTCACGGCGGTTCGCTT 10505 29 90.0 102 ........C........-...........A CGCCACGACTGAGTGCTGATGCCCGCCCGGTCCGCTAGTTCCAGACAGGCCCTTAAGATGTGAATCACTGACTCTGTATTCACTGCCTGACAGTGTATACGG 10636 30 86.7 0 .A.......A..T.......A......... | ========== ====== ====== ====== ============================== ====================================================================================================== ================== 45 30 99.3 38 GTTTCAGATGGACCCTTGTGGGGTTGAAGC # Left flank : GGTGCTTCACCGCGTGCGCGTCGTTGACGCTACGACGCGTTATGCCTGCCCGCCGGCACGCTCGGCACGAAGCGTGGAGCCCTGTATAAAGGCCACGTATCGGCCGGGATAGCGGTCGCACACCACACCGATCCCCGGGGAGAACACCAGCATTGAGAGCTGGGGCTGCACGGATAGTACGACACGAACAGCGGTTGGCCCTCCCGAGGACACGGGAACCTGTGGCCGGAAATCACATACCGCGAGGCCGCTTTGCGCGGACGGACGGAACTCCCGAGACGCACGAGCGGGTACCCCGCCGTATACAGAGGGTGGCTCTCCGGCCACCCGCGAGAACGGAAAAAGAGACATCACACTCATTACTCATACCACCGATTCAGACACCCATCAGGAACAGCCGTTTCGTCGACCCCCCAGGGGTTCTGGGGGTATTGAGGGTCGACGAAATCGCTGGCGTGAAAGCGTCCGATACAGTGGCTGTACTGCCCGAATCAGGCATG # Right flank : CTACAGGCGTGTATGATATAGTTTGGTAACCAAGCGGTTACAGACGAACCCCTGCGGAGCGGATTAGAAAGAGCAGATACTACAGGTTAACAAAAATCCTGCGTCGCGAAGACTTTGCCAGAATCAGTTATCTCGATCCCAATCCCCTCAGATTGCCAGTACGGCGTCAGGATATTCTCTCGATGCCCTGAAGAGTCCATCCACTGGGTGACAATACCGCGTGCGAGCTCATCTGCAGTATTATAAGTCCCTTCTCCGCTGATTGGCTCACCAAACCACGTCTGTGCGATATTTTCGCCACCAGTTGCATATCTGCTATCAGAGATTGTTACTTGACACTGATAGCCTGCTGCAGCGTATCTGTTACTGAAGTCGTTTCCAGACGGATCAGTATGCGAAAAGTACGAGCGGTTCGCCATGTCTTCGCTGTGGTTGCGGGCAATACGTCTGAGTTGAGAGTCATGGCTAATATTAGCCAGTCCCTGTTGTTGCCGCTCTTT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGGACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.50,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //