Array 1 1181771-1182640 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032291.1 UNVERIFIED_ORG: Enterobacter cloacae strain AR_0073 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1181771 28 100.0 32 ............................ TCAGGATAACGCGCAGGCTGGCAATGACGCTC 1181831 28 100.0 32 ............................ CGAACGACGCCATCACTTTTGCCATCCCTTGC 1181891 28 100.0 33 ............................ TGCAAGCAGGCGGACGCGCCAGCGGCGCTGGCA 1181952 28 100.0 32 ............................ ATAACGTCCCCTTACAGGCTTTTGAATGCCTT 1182012 28 100.0 32 ............................ AGCTGGACACGGAGAGGAACGCGGCATGAGCG 1182072 28 100.0 32 ............................ ATACGTGCTCGCCCCTTTGATGGGTATTACCC 1182132 28 100.0 33 ............................ AAAACAACACCAGAGGGCGCGAGGACCATCCAC 1182193 28 100.0 32 ............................ ACATATTTCGTCAAAGCTGCGGGTGATTCTAT 1182253 28 100.0 32 ............................ GACGAACTAGCGCAATACGTAAGCCAGATCCA 1182313 28 100.0 32 ............................ TGTGCCCAAAGCAGGTCACTCAGTTCTGATGG 1182373 28 100.0 32 ............................ ACTCACGAGAACGGGCGAGACGGCAACCGATG 1182433 28 100.0 32 ............................ AGGACGTTTTGATGCGTCTTGCCCAGCTTTCT 1182493 28 100.0 32 ............................ TGGAATTCAGGGCGACCGTCCGGACCATTGCC 1182553 28 96.4 32 .....A...................... TCTGTGGCTTGCCGCCAAAAGAAGGCCGACTA 1182613 28 96.4 0 ........T................... | ========== ====== ====== ====== ============================ ================================= ================== 15 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCATAAGCTGTTTGGCGGGGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATCGCCTACGGCGTATTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCATGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGCGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAACACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : AGCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCCAATGCCGAACACGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGTTTATGCGAGGACCAAATCGCCCTGGGGATGGCACGAGCACGCCAACACGTAACCCTCGGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGCACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAACGGGTCACGCCGAGCGCTTTCACGTCTTCTTCCACGATAGCCATGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1197504-1198196 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032291.1 UNVERIFIED_ORG: Enterobacter cloacae strain AR_0073 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1197504 28 100.0 32 ............................ AGTTCACAAACCTGACCAGCGGCACCATCTAC 1197564 28 100.0 32 ............................ GTTCTGTTCAGCGCGCGGTTGTATGCCATCAG 1197624 28 100.0 33 ............................ ACCAGCCACCGCCGTATTCTTTCGCACGCTGAA 1197685 28 100.0 33 ............................ ATGAGGGCGCACCGCATCATAAAAATGATGCTG 1197746 28 100.0 32 ............................ TCATCGAGTGTGAGGCTGTGTGATTCCATGGT 1197806 28 100.0 32 ............................ AAAAGAGGCGCTGGACTGGCTGACGTCAAAGG 1197866 28 100.0 33 ............................ ACTACCGCCATTTACTATCACGGCTGCTGAAAT 1197927 28 100.0 33 ............................ GCCAAGCGTGGCACCACCGTCGGTTTTTGCCTC 1197988 28 100.0 32 ............................ GGTCGGAGTAAACCAGCTTGGTGACGAAAGGA 1198048 28 100.0 32 ............................ TACCTGGGCTTTTCGCCTCAAAAAGTTATTCC 1198108 28 100.0 33 ............................ CTTATGCGGTGTACCATGAGGCGAAACCAGCCC 1198169 28 82.1 0 .....................AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 12 28 98.5 33 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTCCCACAAACGCAGCCCGTATGTCGTTGCCTCGGGGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGATAGTGGAATTTGAGGACGAATCGGAACCACCGCAACAAAAGGAATGGCTGCTGGAAGATACAAAAACAAAGTGTGACTACTGTCGGGCGTTAAACCATGTACTAATGGTGTCGCAGTTTGACCGCGATATGCTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCGCCTCAACGTGCAGAAACGATAGTTCACATTATTTCCTGAATGTAATTCGTAGTGTCGGGGAAAGACTACTGACGCCACTGGCTTGACCCTTTTTTTGATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTTCCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTGGTTTCCTTTCA # Right flank : AAAAACAACTCTCTAAAACATTCAGCTTACCTATTTAAAACTTAATACGATCAAACCCACATTCTTTATTTTTCGCAATAAATAAAAAATTCATTCACATACCAATTATATTCTAATGAATATATTGTTCGTAAAAATAATGCATTAAATGGAAAAGTGATTTTTCACTTTATTATCGCGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACCTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACCATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGATGAATGGCGGGCGCGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTGACACAAATGGCAATGCGGGAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 1207691-1208499 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032291.1 UNVERIFIED_ORG: Enterobacter cloacae strain AR_0073 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1207691 28 100.0 32 ............................ GTCTGAAGCGTGGACGATTATCCAGGGGAAAA 1207751 28 100.0 32 ............................ GACTTTGAACAAGGAGTTTATTGAAGAGAACC 1207811 28 100.0 32 ............................ AGACGGAACCAAATCACCTGTAGTGAGGAAGA 1207871 28 100.0 32 ............................ GTAATGAGTGGTGGTTAGACGAAGCACAGGGT 1207931 28 100.0 32 ............................ TGCCAATCAGCGCAGGTAACTCTGTCGGTTTC 1207991 28 100.0 32 ............................ GTTGGCCATATGGGGCTGGATGGATTCTATAC 1208051 28 100.0 33 ............................ GCTGCCGTTTGAATCAATGGTGATGGATGCGAT 1208112 28 100.0 32 ............................ AGGGAACTGGCGTAAACGTCCAGACGTCGGTG 1208172 28 100.0 32 ............................ GATTACCTTTCCGGCTCTGTACGCCTGCCGGT 1208232 28 100.0 32 ............................ ACTATCCAGGCACATGGCGAAGAAGTCAGCAC 1208292 28 100.0 32 ............................ AGCCCGGCAGAACCTAACCAACCCGCACCAGC 1208352 28 100.0 32 ............................ GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 1208412 28 82.1 31 A...A......C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [1208436] 1208472 28 71.4 0 ....A...T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 14 28 96.7 32 GTGCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : AAACGTGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGGCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTAATGTCATTTGTCATGGGTAAGTATAGCCATTTGTCAGGGTGGGTGGAATGGGTGTTTTTGTGAGGGGGAGTGATGCGAAGAAAGGTGTTTCGACCCTAATTTTTAGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAGATAATCGACTGCTACACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAAC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //