Array 1 60919-60279 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ATNG01000005.1 Klebsiella michiganensis strain SA2 contig5, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
     60918	    29	 100.0	    32	.............................	CTCGATATTTGAGTCCTCAGCCAGACCAATGA 	
     60857	    29	 100.0	    32	.............................	GCGATAGCGGACACACTACAAACAGCAGCCGA 	
     60796	    29	 100.0	    32	.............................	ACAGCGCCATCTGAGCAGGAGGCGATCGATAC 	
     60735	    29	 100.0	    32	.............................	TTCTTTTGAGCAATACTACCTGAACCGTAAGG 	
     60674	    29	 100.0	    32	.............................	GGAGCATTTAAAAATCTGCTGCTGCACGCGCC 	
     60613	    29	 100.0	    33	.............................	AAATCCGCAGCCGCCGCGAAGTCGTTCGCGTGT	
     60551	    29	 100.0	    32	.............................	GTTATATCCCTTACCCAGGCTTCAAAAAGTTG 	
     60490	    29	 100.0	    32	.............................	TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 	
     60429	    29	 100.0	    32	.............................	GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 	
     60368	    29	  96.6	    32	.............T...............	AACAGCCCACAAAACTTTTTGCATGGAGCCGC 	
     60307	    29	  93.1	     0	.............T..............A	|                                	
==========	======	======	======	=============================	=================================	==================
        11	    29	  99.1	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCAAACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTCTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT
# Right flank :  CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGTTCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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