Array 1 19672-22162 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMQG01000054.1 Fischerella thermalis BR2B NODE_81_length_25635_cov_53.118275, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 19672 37 100.0 40 ..................................... ATCCCTCTCCGCCATGCCCGCGTGGCTAATGGGCGGAAAC 19749 37 100.0 39 ..................................... TCGGATGAAGACTTCGACAGAGCTTTCCCGGCACTCCGA 19825 37 100.0 32 ..................................... TTTCGCCTCCTGAACGTAGGGCAATAGCCATT 19894 37 100.0 36 ..................................... CTTGCTCCGGCCTAGGCACTCGGACGCCGCTGCCCG 19967 37 100.0 34 ..................................... GCCACCATTCCCCCGTCGGTGTACGATAGATATG 20038 37 100.0 34 ..................................... GGGGTTAGTGAAATCCGATACCACATCGGTCCAA 20109 37 100.0 33 ..................................... TGGCGACATTGCACGATAAAACTAGAAGACAAA 20179 37 100.0 35 ..................................... TCCGGCTGCCTTCGGCAATCGATTCAGAGCCGCAC 20251 37 100.0 36 ..................................... TTTCACTACAGGAGAGAAGAACATGGACATCATAAG 20324 37 100.0 37 ..................................... CGGAGCGATCCCATACACGCGTTGGCGTCCCCCTTCA 20398 37 100.0 35 ..................................... TCCCATGGCAGCGGCGATCGACGAGTACGGGAAGC 20470 37 100.0 39 ..................................... CGCTGGGCGTTCGCTGTTGGGTGGCTGAGATGCGGTCGG 20546 37 100.0 35 ..................................... CCATATCGTACGCCCCGCTTCCTCTGCCTTCCAGC 20618 37 100.0 31 ..................................... GATTTTAATCTGCGGCGACCTAGAGCCGAGA 20686 37 100.0 35 ..................................... ACGAAGACAGGGAGCGGCAAGGACACATCTTATGT 20758 37 100.0 34 ..................................... GGGATGGGATCGCTGCCACCTTCAAAACCAGTGG 20829 37 100.0 36 ..................................... CCCCACCTTCCCAGAAAGCGTCCCTAGCAGCACGAC 20902 37 100.0 33 ..................................... TTCTGGATGTGCTTTCAGCCATCATGCGAGAGA 20972 37 100.0 32 ..................................... AAGACGAGCTTCCCTCTGGGCTTGAGGAAAAA 21041 37 100.0 34 ..................................... CTGAGTGAGTGAGCGAATCACTCGGCACAGATGA 21112 37 100.0 36 ..................................... AACCAGCATAAGATAATTGAATTAAAACAAAGATCA 21185 37 100.0 40 ..................................... CCGTACCCGCCGACGCAGTGCTCCAGGGACTGCCCCCAGA 21262 37 100.0 34 ..................................... AAAAACAGCTTCGGACTTCGAGTACCAAGGTATC 21333 37 100.0 36 ..................................... CGAGGTGAGTTGCCGAAATAGGAGTAGAGAGGTCGC 21406 37 100.0 34 ..................................... GACCTTCAGGTCAAAGTCCGGCAGCCTTTCTACA 21477 37 100.0 35 ..................................... AGTGGCTGAACCTGAGGCTGAACCTAAACCAGATT 21549 37 100.0 38 ..................................... ACTGGTGGAAGGCTGCTCTGCTGCGGCGATCGCCCAGA 21624 37 100.0 38 ..................................... GAAAACTCGGAAAGCGCTTACAACCAATACAAGCCACT 21699 37 100.0 34 ..................................... CGCGAATGCCTCCGGCACGCTACGCGAACGCTGC 21770 37 100.0 35 ..................................... TCAAGAATTCTCCGATGTACGGATATGACTCAAGA 21842 37 100.0 34 ..................................... AAGCCTCGCGATTCCCATCTGGGCGGAGAGCGAG 21913 37 100.0 35 ..................................... CGGTGGGCAATCGCCGCCAAGGCAAAACCCGACGA 21985 37 100.0 33 ..................................... GAACTGACCAGCCCCAAGCACTTCTCTGGCATC 22055 37 100.0 34 ..................................... CAAGAAAATCTCGGCTAGTTTTTACAAGCCCGAT 22126 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 35 37 100.0 35 GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAG # Left flank : GTCCAAAAATTAACAAGGCGACGATCGCGATTACCCCTACTTCTGTCCATCCCAGTCCAAACATAAGTGTCTCCCGTGAAAAACTCTACTTAAAATATAGTAGGGTGGGGATGTATGGATGATGTTGTGATTTTATTTGGGGTGTGTGGTTGAGTATCTTTTTTGAACCACAAAGCCACAAAGACACAAAGAAAAATCGATTTTGAAGTCCTAGTGTTATGGCGATCGCCCTAGGCTACTTAGGCTTGATTGGTGCAAACCTGTAGGTGTTTTTTGGAGCAGGTGAATTTTAATCGCTGGAAGCCCTACCAGTTCTGCTTTTGAATGCTTCTAAGTCCAAAAGGGGTTTGCACCAATTGTGAAATGCTTGCCAGACAAGGTTTTGAGCCTATTTTTTCTTCTCCGCCCTTGACATTCCGATGGCTGAAACGCTATATTTACTCTAGGTCTGCACCACTGAACCTTGAAAACCAAATACAGCAAGGCTTCTGAATTGAGCT # Right flank : GTTAGTAGAAAAAGTAGCGGGGACTCTGATATGAGAAGCTTTTGGTGGGAGTATTTAGGCGAAAGATTCGAGGTTATTTTTAATTTAATAGCTGGTGGTAGATGGTATAGACATCAGGACACTACAGATCCAACAGTAGTACATAGATGCTTGATAATTGATTACCCACCAGTCGAGAACTTACTCGGAGATTCGGAGTTTCGCATTTACGAATACGAACTTGAAGAACTAGATCCAGCAGTGCGCTCAATGCTATTCCAAACGCTGAAAATGGACGCACCGGAGTTTGAGTGTAGCTACTCGTGAGAAAGTTTGTTGCAACTCAATGCCATAGACACCGCCTATAGACACCGCCTTCTGGGTGGTGTTTTGTGTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAGAAGTAGTTAATTCTTTGGCATCAAAACTCAGCAACCACAGTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAGTACAACATCAACAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 2 22535-25591 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMQG01000054.1 Fischerella thermalis BR2B NODE_81_length_25635_cov_53.118275, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================== ================== 22535 37 97.3 39 ....................................G AAGTAGTTAATTCTTTGGCATCAAAACTCAGCAACCACA 22611 37 97.3 36 ....................................G TACAACATCAACATCTACAATTCTAGAACAATTAGA 22684 37 97.3 39 ....................................G AAAGTTATATCGGCATTCCCAAACACTCTTCTCCCTGAA 22760 37 97.3 35 ....................................G CCGATGAATTGCTTCACCTCTCCCTGGGGGTGCGC 22832 37 97.3 40 ....................................G AAGACACTTTTCAGGCAATAACAGGCTAATAACGCCTTGG 22909 37 97.3 32 ....................................G ATCGGCGGATCCACGCCCCCTCCCAATGACAC 22978 37 97.3 36 ....................................G AATTGACTCTAGCCATTTATTGAATTGTTCGCGCTT 23051 37 97.3 32 ....................................G AGGACCGCGCCATCGACCGCGCTGACGGTAAA 23120 37 100.0 37 ..................................... GGGTGGGCAGTATCTGGGGAGGCAGAGCTTCCCTAGG 23194 37 100.0 36 ..................................... ATCCCCCCTCCGGATTCGCTATGCGAATGCAAAGGG 23267 37 100.0 36 ..................................... CCCAGCGGCGCAGATCATCCCTGATGAGCTGCTTCA 23340 37 100.0 39 ..................................... TGCCGGCAGCTTCTCGATCCAGTCTGCACGACAGATAAC 23416 37 100.0 40 ..................................... GCCTATCTCGACGGGCAACTGCAAGTAACAAACATCTACT 23493 37 100.0 36 ..................................... CACTTTTTCCATGCCTTGGTGGCATGAATATCATTA 23566 37 100.0 40 ..................................... CCACCCCTGGGATTTGAGAAGGTGCAATAATTCAATGCAA 23643 37 100.0 35 ..................................... CGGCAGCGGGATAATCTCTGGCACTGGCGAGATAA 23715 37 100.0 36 ..................................... ACTATCTTTGACCCGCCGAAGGACTTGCTGTTAATG 23788 37 100.0 40 ..................................... TTTTTAAGACTTCCTGAAAAAAGATTGCCAATAGTGTCAG 23865 37 100.0 36 ..................................... TTTGCGCTTCAGCACCCCCTTATCGCGTCCCTTTGG 23938 37 100.0 35 ..................................... AAGCCCGTGCCGTAACTGAGCATACATTCAATCTC 24010 37 100.0 41 ..................................... GCTACCTCCCGTGGACGATATTTGCGGAATATCAATAAAAA 24088 37 100.0 38 ..................................... ACGTTGTTTTCGTACATCTCATTAATAGTTACCGTGGC 24163 37 100.0 38 ..................................... CACGCGCCGACATTGTTAGACAACAACTACGCGATTGA 24238 37 100.0 38 ..................................... TTATCTGTCGCCTCCCAGAGGCTCATCTCTTCTATCTC 24313 37 100.0 34 ..................................... GTAGCGATTGGACACTTCGGACGCGATCGCTATG 24384 37 100.0 33 ..................................... GAAATTAGCTGAATGACCAAATATACCTGAAGA 24454 37 100.0 34 ..................................... GAGTTGCAAGAAATGATGCGGCGATATCCTTTCT 24525 37 100.0 35 ..................................... TGATCCTAATGAAATCCTTAACCAATATATTCATT 24597 37 100.0 39 ..................................... CCGTTCTGTTCCTCTCCAGAGCACCGCATGGATCTGGTT 24673 37 100.0 31 ..................................... AGAAATCCAGAGGATCCCATTCTCACCCAGA 24741 37 100.0 42 ..................................... GGCTCCTAGAACTTGCCGGAATGCTTTTGTACTACCAGTAAC 24820 37 100.0 34 ..................................... GCCTTTCGCCCAGTGCCAAGCGACACCGGCAAGA 24891 37 100.0 33 ..................................... TGTTACCAAATACCACATCCCATTTCCCAGATC 24961 37 100.0 34 ..................................... CCCATTGCTCCGAAACAGAGGGACGAGATGTCGA 25032 37 100.0 33 ..................................... AAGCAACAGCAATTAGTTCGCAAAATGAGTTTG 25102 37 100.0 34 ..................................... TCACAAAAGGCGATCGCGTCCCTAGTTGAGTTGC 25173 37 100.0 34 ..................................... AAAATGGAACTGAACAACGTTTAAAGTGGTTCTC 25244 37 100.0 35 ..................................... GTAAACCCTCTGGGTTCTCGATGACGACAAAGGAA 25316 37 100.0 43 ..................................... GGATTATATTGGCAAACCCCCAGCAACATTGGAGGTGGGATCT 25396 37 100.0 35 ..................................... TAGGAATGGGATACACATCGCTCTTGAACCATCCC 25468 37 100.0 50 ..................................... CAAGGTAATATAGAATCGGATGGGGGCATGAAAATGCTCAGTGATATAAC 25555 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================================== ================== 42 37 99.5 37 GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Left flank : CCAAGCACTTCTCTGGCATCGTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAGCAAGAAAATCTCGGCTAGTTTTTACAAGCCCGATGTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAGTTAGTAGAAAAAGTAGCGGGGACTCTGATATGAGAAGCTTTTGGTGGGAGTATTTAGGCGAAAGATTCGAGGTTATTTTTAATTTAATAGCTGGTGGTAGATGGTATAGACATCAGGACACTACAGATCCAACAGTAGTACATAGATGCTTGATAATTGATTACCCACCAGTCGAGAACTTACTCGGAGATTCGGAGTTTCGCATTTACGAATACGAACTTGAAGAACTAGATCCAGCAGTGCGCTCAATGCTATTCCAAACGCTGAAAATGGACGCACCGGAGTTTGAGTGTAGCTACTCGTGAGAAAGTTTGTTGCAACTCAATGCCATAGACACCGCCTATAGACACCGCCTTCTGGGTGGTGTTTTGT # Right flank : AACAATGACCCTGAACTCTGTATATGGCTAATTTCTGTTGCAACTTAGGCGTTGCATAATAGAGGGATGAATTGAGGTTATCTACTGTGCAATGTCCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 1 15617-15436 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMQG01000013.1 Fischerella thermalis BR2B NODE_14_length_39069_cov_55.589062, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 15616 36 100.0 37 .................................... AAACCATCAACGACGGCAACACACCAAACGAAACCAC 15543 36 100.0 36 .................................... TCTGCGTGGGCCATGCTTTTGATTGGCTCCGCCTGT 15471 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 3 36 100.0 37 CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC # Left flank : TGTAATATCTAATTCTCGGCTATATCTAAACAATAGTTCTGGCGAACAGTTACTAAAGAACAGCTAGGATTAGCATCACCCTGCTCTGGAATTCTACTCATTCCCTGTAAGCTTTGCGGCTTTGCAATAAAGAAGCCTACAAAATAATTTTGTACTGTCATTAGTTAATTTAAAATGCGGATGAAAGGACTTGAACCTTCACGCCTCGCGGCACTAGAACCTAAATCTAGCGCGTCTGCCAATTCCGCCACATCCGCATCAGTTCCTTATCATAGCATAAAAGTTGTCTAGAGCAATAATTTTTACGAATTAAGAGCAACTACCGAAGTTCAGCCCAAATTCTGCAAATGCCTATTTTTGTGTTGTGAACTTCGGTTGTTTAGTACATAAGGGTTTTAGGCTTTTTGTTTGGAGGAATTGAGATGTTTTTGTCTGTAAATTATCTGAACTTCGGAAATCGGCTCTGGAAATCTTACTGGGTAACGGTTTAAAATAGGACT # Right flank : TGAATGGAAACAATGGGAACCTAAATTACACCGACACGAGGTAATCGATGCTTGAATCCGCAGAGAATTTCCCAAGAAATTGTGTTTAGTTGATTTGCCCAATCATCAGCGGAGATTTGTTGTTTGCCATCTTGACCTAGTAGGGTGACTACCTCACCTTCTTGTATATCTGGTAAGGCACTGATATCTACCATCAGTTGATCCATTGTAATTGCGCCGATCTGTTGTACTCTTTGACCACGAATTAATACCTGCATTTTGTTGGAAAGATTGCGTGGAACACCATCGGCATAACCAATGCCAACAACAGCAATTCGCATTTCTTGCTTGGCAATAAATTGATGACTGTAACTCACACCAGTCCCAGCAGCAATGGTTTTGACTTGGGTGACTCTGGCCCTGACTTGCAAAACAGGTTTCAGGTTAATTTGCGATCGCAAATGTGTGGCTGGGTAAAGTCCGTAAATGAGTAAACCTGCACGCACCATATCATAGTGTAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCCCACTCGCTGGGGAAACTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 8557-110 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMQG01000022.1 Fischerella thermalis BR2B NODE_40_length_27212_cov_45.084045, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 8556 37 100.0 35 ..................................... GAGAGCCGCGCGATTCCCAGCTGGGCGGAGAGGGA 8484 37 100.0 37 ..................................... GCCGAATCCCGCGCCTCCGAACCGAGATTCGCGCACC 8410 37 100.0 40 ..................................... GGACAGCCCAGAAATCTATACAGCACCGCCATCGGGGTTA 8333 37 100.0 34 ..................................... CTTCCTCACCAGCCTTCCCTTCTTGTAGTCCGCC 8262 37 100.0 33 ..................................... GCTCGCGGCGATCGGCTCGGGAGTGAGCAATTC 8192 37 100.0 34 ..................................... TCCTAAACTAAATGCCATAAAACCTCACTGAATG 8121 37 100.0 34 ..................................... CACGGCAGCAATGGGATACCCTCCATGCTCTCTA 8050 37 100.0 35 ..................................... TGGGGAGAAATAGATCACACCAGACGCTAGCCCAT 7978 37 100.0 34 ..................................... CGACTCCTCCTCCGAGGGCAAAGGCGGGGGACGG 7907 37 100.0 36 ..................................... ATTCGCCTCGCAAAGACTCTGCGATCGCCCATGCTT 7834 37 100.0 35 ..................................... GCCGAAGAACCGACCTACACCTACCACGCGCTCTA 7762 37 100.0 36 ..................................... TACAGCTGTAGACGGAGCACGATACAATCATCGAAA 7689 37 100.0 41 ..................................... AAAATTCCAAAACCAGCACCCGAAGAGTTGGTCAATTTAAT 7611 37 100.0 39 ..................................... CGGCAAGGTCCATGTTGTCGACGCCGGGATGGGGTCCGG 7535 37 100.0 35 ..................................... CGATCCAAATACCAATTAACATCAGTATTGCTCTG 7463 37 100.0 35 ..................................... CTGAAGCATGGCGATCGGCACCAAGAGACTCCAGA 7391 37 100.0 35 ..................................... TTGGGCTAGCTCACGCTTAAGCCCATCCTCTTTGT 7319 37 100.0 42 ..................................... GACATCGAAGTAATCGACATCGACAAGTACTTTACTGGAGGG 7240 37 100.0 33 ..................................... GCACTCGACATGCCTGCTGAACCAGAGCCAAGC 7170 37 100.0 34 ..................................... AAGCAGTAATATCCTGTAGATCCAAGTAGATCAG 7099 37 100.0 33 ..................................... TGGTATTTGCGCCTACCTCGACGACCAAAAAGC 7029 37 100.0 38 ..................................... GGGATGCGCCCCCCTTCGCCGGCATCTATGCGATCGCC 6954 37 100.0 35 ..................................... GTACTTATGTATTTCCGAGTTCATCTTAGGACGAG 6882 37 100.0 32 ..................................... CCTTTTAGCCCAACAACACATCAAAGCCCAGC 6813 37 100.0 37 ..................................... TCCAAGCTTGTATGAAGACACCATTGAAGACACCATT 6739 37 100.0 35 ..................................... GTGGCAATTCTGGCTGGAGATGCGATTCCCCACAT 6667 37 100.0 35 ..................................... AGAGTGCCCAAGCCAGAGCAAGGACTGATGCCGAT 6595 37 100.0 36 ..................................... CTGGAGGTAGTCTTTGATTTCAGATACGGGAATTCG 6522 37 100.0 35 ..................................... TATCTTGTCTTCGACTTCTTCTAATTTTTTGCGGA 6450 37 100.0 35 ..................................... TGGGAGAGGGGAATTATCTCTCTGGGGCGTGGCGA 6378 37 100.0 35 ..................................... AATTGTCGCAGTATTCAGTGTGAATGGGTACTGCG 6306 37 100.0 34 ..................................... CTAGAAGAATTAGTGGCTCGACTCCGGCAGGTGG 6235 37 100.0 38 ..................................... GTGGAAATTCTGCGAGAAAACTATTTATTCCGTCTATA 6160 37 100.0 35 ..................................... ATATGGTGCTTCCACCATTGCCTGCATACAAACAA 6088 37 100.0 36 ..................................... CTTGGTGGCGATCGCACCCGTAGACTCGGCTCCCAG 6015 37 100.0 35 ..................................... TAATCGCGCAATTTGCGCGATCGCCGCAGCAGAGC 5943 37 100.0 36 ..................................... CGCTGGATAGATTAAGCTTAAACTCCAAAACCAATA 5870 37 100.0 38 ..................................... TTTGGAGCCAACGATGCATACCTTGGGCAATCTGATTT 5795 37 100.0 33 ..................................... TTCACATTGATGCGATAACCATTTCCGATTTTG 5725 37 100.0 33 ..................................... AGAAATATTTATAAAAAGAAGAATATTAAAAAT 5655 37 100.0 35 ..................................... AAGAGGAAGCCAAAAGCTTCCTCTTTTTTTATAAG 5583 37 100.0 42 ..................................... AACGCAATCGACCAGCTCCGCGCCCAAGACTGAGAAGTGAAT 5504 37 100.0 37 ..................................... ATGATACCGGCAAGATTCAACCGCATTTAATCAGACT 5430 37 100.0 35 ..................................... TAACCTGTGGCTTTGCTGCTAGTGTCCCGATGTTT 5358 37 100.0 35 ..................................... ATTGATTAACCTAAAATTCGATGTTATGGGAATGG 5286 37 100.0 33 ..................................... AGGAAAGACATACACGGCATCAGCGATCGCACT 5216 37 100.0 36 ..................................... GGGATCTCCATCTACTAACAAAGTTTTTTCTTTCTG 5143 37 100.0 35 ..................................... CTTAACAGATGAATCTATCTATAGTAGACAAATCA 5071 37 100.0 34 ..................................... GGAAACTGACAAGGCGGAAGCTGGGCTAAGAATT 5000 37 100.0 33 ..................................... AGAATCAACAGAAGGGAGAATAATTATGCCTAT 4930 37 100.0 42 ..................................... TGATCAATTTCATGCCGATCCTGACGGGCTAACTCATGCTGA 4851 37 100.0 35 ..................................... GCCAAAGCCCGCACCTCCGAACCGAGATTCGCGCA 4779 37 100.0 34 ..................................... CTCTTTGCCTTCCTCTTTGGGAGGGGTGAGGTAT 4708 37 100.0 34 ..................................... ATCCCACCGCTTGCGATAGCGGTCCGTAAATTCG 4637 37 100.0 34 ..................................... TTCTTCATGGAATGGTATTCTAGAAGTGCAATTA 4566 37 100.0 34 ..................................... TTCTCGGTCACTGCGGTCGATGGAGCGATACTGA 4495 37 100.0 34 ..................................... AATAGCTAAAAGCAGCTAAAAATTTTCTGATCAG 4424 37 100.0 35 ..................................... CAAATTACGCGCCAGCCTTCAGACCAGTAATTAGG 4352 37 100.0 33 ..................................... TTCTCCGATGAGAGAAATCTGCACACTTTTTAC 4282 37 100.0 34 ..................................... TTGAACCCCTGAATGGGAACATTCTTCGCATAAT 4211 37 100.0 37 ..................................... AGGGCGCGTGCCAGGAGATGGGGATGCAGCTCATGTT 4137 37 100.0 34 ..................................... GATATCGAGCAGAATCTCGACTCTGCCATCATTG 4066 37 100.0 34 ..................................... GTCGCAAAAAACTTTTTTCATTGTGTGTCTCCTT 3995 37 100.0 37 ..................................... GAAGTACGCTACGACTTCAGTGAGCTGATACCGTTCG 3921 37 100.0 34 ..................................... TGCCCCCTTTAGGCGAGCATCGTACGGATCAAAG 3850 37 100.0 33 ..................................... AAATTTGGTGGGACCCCTTGGAGTGTAAAAACA 3780 37 100.0 38 ..................................... CGAGAACCCATGAGATAAAGCACCCACCATCGCTTCGG 3705 37 100.0 35 ..................................... GGGTTCAATGAAGCAGTATTCTACCTTCCAAAATC 3633 37 100.0 33 ..................................... GCTGTGAAACTGGGGATAAACCAGTCTTAGGAC 3563 37 100.0 36 ..................................... AATAGCTAAAAATTTTCTGATCAGCCTATTGACATC 3490 37 100.0 31 ..................................... CTGAATGGATAAGATTAGTGGAGTCGGGCGA 3422 37 100.0 40 ..................................... CTACTCCACTTGGCACTTTGCAGTACCCAAGGACATGATT 3345 37 100.0 32 ..................................... CCTAGACGCCCAGCATTTCGTAACCTACGAAA 3276 37 100.0 36 ..................................... AATAGCTAAATCAAAAAATTTTCTGATCAGCCTATT 3203 37 100.0 34 ..................................... CATTGAATTCCGGATGATCCTCGATCGGATCTGG 3132 37 100.0 41 ..................................... GGAGGATTCTAAACCCCATCCGGGCTTGCAAGCCCGGAGTA 3054 37 100.0 37 ..................................... GCGCCTCCGCGACATTTTTTGATTCTTCTTTCATTCC 2980 37 100.0 33 ..................................... CAGATACGGATGATCTGCTCCGAGCCTTGAAAG 2910 37 100.0 35 ..................................... TTATAAATTGCTTCCTTTCAAGGCCACTTAAAATC 2838 37 100.0 37 ..................................... CCCTAGAATCCTTTATAACCACTATGTCATCCCTACC 2764 37 100.0 37 ..................................... GGATTGGCGAGATCCAAAGTACAAAGATCCGCCATGA 2690 37 100.0 35 ..................................... CGAAGGGATAGCGCATCGGAGCGGAGATTCGATAA 2618 37 100.0 35 ..................................... CTACCTTTAACAATCAACCCCTTAGTCTCTATATC 2546 37 100.0 35 ..................................... ATCGAAATGTCAATAGCTTTCGTATCGCATTTGGG 2474 37 100.0 33 ..................................... AAAAGAAGAAACAAATTCATTAGAATCTCCAAA 2404 37 100.0 36 ..................................... GGGATCCAAAATACAAGGATCCCCCATGAATTACTT 2331 37 100.0 34 ..................................... GGAGTACGACATATTCTTCGAGGGCGATCGCGTA 2260 37 100.0 35 ..................................... ACATTTACCCAGTTCCTTCAGCCTCATCCAAGCGG 2188 37 100.0 35 ..................................... TGGATGAATGGGGATATTTGGGAAGTGCGATCGCA 2116 37 100.0 35 ..................................... CCTGCAAAGAACTGGAAGGCTCCAGTCGTTGTCGA 2044 37 100.0 34 ..................................... TTCTCTGAGCGGAGAATAGATGGAGTGCGATCGC 1973 37 100.0 33 ..................................... AGGGGAGGGGATTCGAAAATCTGTATTGATCCC 1903 37 100.0 34 ..................................... AATCGCCGAGCCGTTTCCGTAGGACCAATGATTG 1832 37 100.0 35 ..................................... GAAAGGGGATAGAGATACTCTGGGGAAACGCTTCC 1760 37 100.0 43 ..................................... TGGAGAACTTGCTCCAGGTCGTCCCCATCGTAATGCTCTCGAA 1680 37 100.0 34 ..................................... CCGACCTGGGCACCTCCCTCGGCAGCATCGAGCG 1609 37 100.0 35 ..................................... GCATAACGACACCTGAGAGAGAATGACCGTTTCAG 1537 37 100.0 35 ..................................... GACCGCAATCGACCAAGCCGAGAGCTTTGCGGAGT 1465 37 100.0 34 ..................................... AGCCCAGATCCAGTCGCCGCTGGGGTAGGACACG 1394 37 100.0 35 ..................................... GCCAGATAAGAAAGCAAGCATTTGCAGCGATCGCG 1322 37 100.0 41 ..................................... GCCGCTGGGGAACCCCACGAACCCCAGCTTCACCAGCGAGG 1244 37 100.0 34 ..................................... TTATCGCCATTTCTCGGCCCTTCTACATCAATGC 1173 37 100.0 35 ..................................... CAAAGGCACGCCAGGAAGGATCAAAAGCAGATATC 1101 37 100.0 33 ..................................... GAACTTTTTTTGATAGGGCAATCCGGCTCATTG 1031 37 100.0 36 ..................................... GACATCCTGCTAGACAAGGCAAGGTACGACGACTGG 958 37 100.0 37 ..................................... CTCTCCTATACCAGAAAAATCATGTGATATCTGCCCC 884 37 100.0 34 ..................................... CCGTGCCTAATTCTTTCGGCAGCGTATCTGCTAG 813 37 100.0 37 ..................................... GGCACTAGGAGTGCCGTCAGGTAAACATTGAATTTTG 739 37 100.0 39 ..................................... TACCTCAAAGCCTCTTCAAGCCAAGCCCATCCCGGCTAT 663 37 100.0 37 ..................................... ATTCAATGCAGCCACACCATCAATAATAGTGACTCAA 589 37 100.0 41 ..................................... GCGGGTCGGGAGTACGATCTCCCAAACCCCATCGATTGAGC 511 37 100.0 33 ..................................... TGCTTACGTTTTATGAACTCGTATTCCCTTTCC 441 37 100.0 35 ..................................... TGAAGGCTGGCGCGTAATTTGTACTAACAAACAAC 369 37 100.0 37 ..................................... ATTATTTGGGGATGGATAAATCGGGGATATTTTAAGA 295 37 100.0 34 ..................................... GACTGGCAATTTTGAGTTTCCTTTTAATATCAGA 224 37 100.0 41 ..................................... TGGGTCGGACACAAGATCTTTGCCGAGCACTTTCGACCAGT 146 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 117 37 100.0 36 GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Left flank : CCCGAAGATAAACGTCGTACCAAAATCCACAATATTCTCAAGTCTTATGGACAGTGGATGCAGTATTCTGTATTTGAGTGCAACCTAACTGAAACTCAGTATGCTAAATTGAGGTCGCGGCTAGCAAAACTCATTAAACCTGATGAAGACAGCATCCGCTTCTATTTTCTTTGTGCTTGCTGTCAGGGTAAAATTGAGCGCATTGGTGGCGAAATGCCAATGGATACTACGGTGTTTTTTGCTTGATGATGGTGCAAACCAGTAGGTGTAGAAAAAAAGCAATCAATTTTTGGGGCTGAAATGCTGATTCTGTCTAAGTTAGAGACTGATTTGATGGCAAATGAGGTCTGCACCTTTTCTGTAAATCTTACCCTGACTAGATTTGAGCCATTTTATACTCGTTTGCTCTTGACAGTGCGATCGCTCAAACGCTATATTTAATCTAGGTCTGCACCACTGAACCTTGAAAACCAAATACAGCAAGGCTTCTGAATTGAGCC # Right flank : CTCCTAATGGCTCTAGGGAGCCTCGGAGAGACCTTGTTGCAACTTAAATTAATCCCTAGGCGTTGCATAATAGAGGGATGAATTGAGGTTATCTACTGTGCAATGTCCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 43-2018 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMQG01000136.1 Fischerella thermalis BR2B NODE_209_length_3824_cov_46.714958, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 43 36 83.8 35 TA......-ACC......................... TACCATGATCCCATACATAGCCGCATGTCTCCAAG 114 37 100.0 33 ..................................... TTTACCTTTAGGCTCCCTGAAGGAGTACGTAAT 184 37 100.0 36 ..................................... AGCCAAGAAGGACTTTGGACTTTTATATGATAATAA 257 37 100.0 34 ..................................... TTGCTGCCAATCTGGCTTTGGAGCTTTATTCTGG 328 37 100.0 38 ..................................... AACCGGAAGTAAATCCGGCATTTCGTAATCAACGAAAT 403 37 100.0 35 ..................................... CTTTGAAATGTATGCCCTTCAGTGCCTGGCTGGAT 475 37 100.0 33 ..................................... GTGACTCCAGCGATCGCTAGGGCTGCCGAGGCT 545 37 100.0 36 ..................................... CCAGGAGAACGCCCAGCACTCCGGCACTCAAGCCAA 618 37 100.0 34 ..................................... CTCCGAGTACGAGATGGAGGACACCGGGAATCGC 689 37 100.0 34 ..................................... TGGGCAGCCATGGGCACCAACGCCATGCCCGAAC 760 37 100.0 36 ..................................... TGACTTATTCCAACAGGGATAAACTCGCCCTCAAAT 833 37 100.0 31 ..................................... GATAACGAACACTCTTCGACCGGGATATCGC 901 37 100.0 37 ..................................... TTTTAAAAGCTTTAACAAAAGCTTTAATAGGAGCTAT 975 37 100.0 36 ..................................... ATCGCAAATCTTCCGCCTCAAAATATCGAGGCTGAG 1048 37 100.0 36 ..................................... TCGCCATTCTTCAGTCGATTGTGCCCATTGCGGTAG 1121 37 100.0 35 ..................................... CTCAGAACCTTACGCAATATCGGTAAATTCTGAGA 1193 37 100.0 35 ..................................... TGAGCTCGGTAAGCCTTTAGATCCCACTGATCCTT 1265 37 100.0 38 ..................................... CGAAATCCTCTAATTCATAAAGAAAATTTCGGTAATCA 1340 37 100.0 34 ..................................... GCGTAGATAATCGGGTATCTGAGAATAAAATGGG 1411 37 100.0 35 ..................................... AGCATCACTGCGCGCGATCGCAGCGGCAGGACAGA 1483 37 100.0 34 ..................................... AGCCGCCTGATGCAGAATTACTTCTTGTTTGAAG 1554 37 97.3 36 .......................A............. GCAACGCAACTTAGATCTGCGCGGACAGCTAAATGA 1627 37 100.0 32 ..................................... TCCATCGATATCGAAATCAGAAGAGTTAGGGA 1696 37 100.0 35 ..................................... GCCATCAGCCCGCATCATGTGTTGGTCAATGTAGG 1768 37 100.0 34 ..................................... CGCGAGTGAGTGGACCCCCCAAAATATAGGAATC 1839 37 100.0 34 ..................................... CTTATTAATTTTTTGCCTAGTACTCCTGATTCTT 1910 37 100.0 35 ..................................... GACATTTGCGAGCGAATTGCTCTAATTCGCTCGCA 1982 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 28 37 99.3 35 GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Left flank : AGTATAGAGAAATACCAGTATTTGCATAATTCATCCCGCATTT # Right flank : CAAAAATCCATTAGATGTAACCAAACCACTCACAATGAGTAACTAAAAAATTACGTCGAGAACCAAGAACAACCAAAACAATGATTCGCTACGCTCAGTTTTATATTGGTCGCAATTCATCTGCCGTTAACTCTTTCGCCTTATATCCCGCCACTGATTCGGAGTACCGAATTCAGTGGGGGACGAGGGCGCGAAAGAGTTAAACATGAAATGCTCTACAACGCGATCGCCTCTAATACCAATTTAATGTGAAGCCGCACCAAATGACTAACCCTCCACTCTTGGCGTTCTTGGCTTCTTGGCGGTTTGTTTTTTAATATTCTGTACATCTTCATAAATAATTGCATTTCGTAAGTTCATAGCGAAATGTTTGCACAAAGACTCCGCGTCCCTCTGCGTTTCAAATCGCTACTTTTTCATGCAGTTTTCAGGCCTACTTCTATTTCTTCCGCCCGCCAAGGCGAATAGGCAACTACTTCCTAGATATATGCTTCTTCTAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTAAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 1710-10579 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMQG01000158.1 Fischerella thermalis BR2B NODE_239_length_10988_cov_37.320713, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 1710 37 100.0 36 ..................................... GAGTAGTATATCGATCCTGCCGGAGTTGTTCACTCC 1783 37 100.0 35 ..................................... GGGAGCGCCATCTGGGGGGCAAGAAGCCAGCAAGG 1855 37 100.0 34 ..................................... GTGGCGAGCAGCGATCGCCTCCAGTTCCGGGAGG 1926 37 100.0 36 ..................................... AACCTGGAACCAGCCTTTTCGAACCATCGGTAAATG 1999 37 100.0 36 ..................................... ATAGTTAGTCATAGGCTTAAAATCCTGTAGATCACT 2072 37 100.0 33 ..................................... GCGATCGCGGAGGGTAAAGATGAGCCTCCCTCT 2142 37 100.0 34 ..................................... TCCATCGGATGGGGTGGGGGTACCGAAACAGAGA 2213 37 100.0 34 ..................................... TACCGCGGGAGCTTCCGTTGGAAGCTTTCTAATC 2284 37 100.0 32 ..................................... TTTGCCAGAGGTAGCCGCAATCCCTTACGAGG 2353 37 100.0 32 ..................................... TTTGTGCCCATTGCAGGAGATTTTCTTCTATC 2422 37 100.0 33 ..................................... GATGCGACATGATCGACACGCACCACATCGATC 2492 37 100.0 33 ..................................... GGCGAAGGTTAGGTTATCTTCGATCACGTTGCC 2562 37 100.0 36 ..................................... TGGCGGGATTAGTTTCCTTGATTGATCTACCTGGAA 2635 37 100.0 34 ..................................... GGCGAGCCTTTTCGCTGCTTTTTGCTCCTCGATT 2706 37 100.0 34 ..................................... CGGCTCTCCACCGGAGATGTACAGCATCTCTAGC 2777 37 100.0 35 ..................................... AGTATTTTAGGTATGGACATCGCAGATATAAACAA 2849 37 100.0 32 ..................................... CTCCGCCCTGGAATCAATCAGCTCCTCGAACT 2918 37 100.0 39 ..................................... AGGAGTCTGAGGGGATCGGACACAGATGCAACCCCTCCC 2994 37 100.0 41 ..................................... CCCCGCTCGATGCATTGCTGTTTGCTGGCGCGCCGCTCTAT 3072 37 100.0 34 ..................................... CAGGATCGCCCGCCAGCCAGATTAGCGATAGGAT 3143 37 100.0 34 ..................................... TCATCGCATGATACGGCAGATTGTAAATAACGGT 3214 37 100.0 34 ..................................... GCATCACCATTGGCGAGCGCGACATTGGAGCAGT 3285 37 100.0 34 ..................................... AATCAGATGGGGTATGCAATTTCATCAGAAGGGA 3356 37 100.0 33 ..................................... TTTGATGAGCTGCTTCAGCGGGAAGAATGGCGG 3426 37 100.0 36 ..................................... CGACTCGATGATTGTCATAATGCACTCCTTGGTCTA 3499 37 100.0 34 ..................................... TTTTTCAATCTGAGCAAGACCCGCTGGCAACGAT 3570 37 100.0 35 ..................................... TTCCGAGTAATCGGTGTATCTTTGGCTTTCTGGTT 3642 37 100.0 33 ..................................... ATTGGCATTGCCATGAGGAAAGGCGATAAATTC 3712 37 100.0 36 ..................................... ACTATCCGCCGTGCTATCAACCGCCGCATTACTGAA 3785 37 100.0 41 ..................................... TACAAACCGAGTATCGGGCGGCACGCTACCGCGAACACTAT 3863 37 100.0 36 ..................................... TTTTAGTTTTATCGTGCAATGTTACTATGCGTGCGA 3936 37 100.0 37 ..................................... GCGACGATCCCATCCCGACTAGCCTCGACAGTCGGTT 4010 37 100.0 33 ..................................... AAACGCAACAGCAAATGGTATATACAACTGACC 4080 37 100.0 34 ..................................... TTCGGAAATGACCAGGCACCCCTTGCCCTCTCTA 4151 37 100.0 36 ..................................... GCTGATCATTCTCTTGGGGACAACGAAATCCCAAGT 4224 37 100.0 35 ..................................... CTCAAAATCGGAGATAAATTCGGGAGAGTACAAAA 4296 37 100.0 31 ..................................... GTAAATCTTGCCATGATTATCCTTCAGATAA 4364 37 100.0 37 ..................................... GGTAAACGCGATCGCGACATCGAAATAACCATAATTA 4438 37 100.0 33 ..................................... CAATTAGTATTATGCACAATCGGCGATCGCTCC 4508 37 100.0 34 ..................................... CACTGTTATCTGCAATCCTGTAAAGGAGAGATGC 4579 37 100.0 34 ..................................... AAAGAGGGACTTTTTGATTAGACAGATCACCCCA 4650 37 100.0 37 ..................................... GAGCCTATCGAAGGTAAGGAAGCGCTCAAAGGGGACT 4724 37 100.0 37 ..................................... TTGATTAATGGGAAAGACCAGGGAGCCAGACATTGTA 4798 37 100.0 34 ..................................... GGCTTTTTTGCAGCGCCGCTACTTGGCGCAAGTG 4869 37 100.0 33 ..................................... GGGGCTGGGGTATTTCGCAGCCCATAGAATTGT 4939 37 100.0 34 ..................................... GCGAACAAGACGTCCTTCGTTAATAAAAAAACTC 5010 37 100.0 34 ..................................... ATCGGTGCTCCCAGAGCCGGGAAAGGGGTATTGA 5081 37 100.0 33 ..................................... CGAGCAGTTTATCGAACACTACTACAAAAAACC 5151 37 100.0 36 ..................................... ACTCTATCTCCTCGCTCCATCGCTCCTCCCCCCTAC 5224 37 100.0 37 ..................................... CCACCAGGAAAACGAACCCCTCACCAATACTTCAACT 5298 37 100.0 35 ..................................... CAAAAGACATGCTGCTGAAACAGTCTTTTGGGTGG 5370 37 100.0 41 ..................................... ACTTTCTATATCAGATGTAGAGACAAACGACGCACGCAAAG 5448 37 100.0 34 ..................................... TCCCAGCGGACACTGACACAGTCTCCGTGTATGG 5519 37 100.0 33 ..................................... GCTGACCGTGCCCAAAGCCTATTGCTGCGATGA 5589 37 100.0 38 ..................................... CTTTAAGCGCGCCGAGCTACCTATGACCCCGGACAACC 5664 37 100.0 40 ..................................... ATCGCAAAACAAATCTCCCAAAGAGTAGATCTCCTTGGGA 5741 37 100.0 39 ..................................... CTCTGCCTGGTACGGCAGCGCCTCGGAATCCACCCCCAT 5817 37 100.0 38 ..................................... GGAATTTGTGGAGCGATTCCATGGTGGTCGCGACGCGC 5892 37 100.0 34 ..................................... TGCGCCTCCTCCGCCGGTGATCCGGATCATCATT 5963 37 100.0 36 ..................................... GGCATGAGTTGCATCCCCATTTCCTGGCACATCCCT 6036 37 100.0 38 ..................................... TAGCGTATCTATATAGGATGTCAATGGGTTAAGGGAAA 6111 37 100.0 35 ..................................... CCTAGGAACCGAGCCGACCCCTCCCTTGTAATGGG 6183 37 100.0 37 ..................................... CACGAGGAAGATGATGAACTGCCTAAGAGATGGCTGA 6257 37 100.0 34 ..................................... CGGTGGAAAAGATGTCTGTGATGCTGCCTGTATG 6328 37 100.0 42 ..................................... GCCAAGTATCTCACGGCACCCAAGGAGAGAGGGGTGGCTTAT 6407 37 100.0 41 ..................................... GAAGATTCTCAGAGCAGATATTCCGCCGCCCACGAGACCGA 6485 37 100.0 35 ..................................... GGGTGCAGGAGGTGCCCAGCGGCACGGCGGATACG 6557 37 100.0 32 ..................................... CGAAATCGAGGTAGGCGAGGGTGCCATGCTCG 6626 37 100.0 42 ..................................... GTGGAGCGAGAACCAGCACCGGATTCTCCCCAATTCGGGGAG 6705 37 100.0 36 ..................................... CCTCTTCGGTGGTGATTTGTCGAAGAGGCACAACTT 6778 37 100.0 35 ..................................... AAAGTATCGCTTCTCTGCGGCAGCATCGTAGTCGT 6850 37 100.0 36 ..................................... GATTTCTTCCTAGGTAGTAGCGACAGAAGTAGTAAA 6923 37 100.0 36 ..................................... TCGGCTTCCTCCCGCAATAGGGTGCGATCGCCCCAG 6996 37 100.0 35 ..................................... CACCTCTGCTTCGACCAGGACCTCAAACCCGATAC 7068 37 100.0 29 ..................................... AGACTCTCGTCACTCACTCATGTGTACCT 7134 37 100.0 33 ..................................... TTTCTTGATCAGGGTTCCTTGGTTCCGGCATTT 7204 37 100.0 42 ..................................... CCATGCCTACACCACCGACTGCTGACCCAGGAAAGCTGCAAT 7283 37 100.0 36 ..................................... TCTAAGATTCATTACATCTCAGCAGAGAACGGATGT 7356 37 100.0 33 ..................................... GAATATGCCAGACGTAGAGGTGCATTCAGTGGA 7426 37 100.0 33 ..................................... GATGACCACGATGTGCCAGCCAGCATCTTTCAG 7496 37 100.0 37 ..................................... CTGGTTGCGATTGAAGGCAACAGCGGTGGTGCTGTGC 7570 37 100.0 35 ..................................... ATCCCAATCAGTGCAACACTAGCGACTTTGGAGAT 7642 37 100.0 36 ..................................... TTGTATTTTTGATGTGCGACTAGTAAGAACGGTTTC 7715 37 100.0 37 ..................................... TAATTTGCGTCGAATCCTTTCTTGTTCCGTATCATAA 7789 37 100.0 36 ..................................... AGGGTATTTCAGGTGATGTTGAGACGAGTTTTTTTA 7862 37 100.0 33 ..................................... GGACCCATATCGCGATAGGCGCAAAAGGCTTCG 7932 37 100.0 36 ..................................... AGCATCACCAACTACGCCATGCTTGGTTGCGATCAC 8005 37 100.0 34 ..................................... AGAACCACTGCCAGTCGTCCAACCAATGGGATTA 8076 37 100.0 34 ..................................... CGCGAACCATTGATTTAGACGTGGCGCAAGCTAC 8147 37 100.0 39 ..................................... CCTAGACGACCTTGCAAATCCCTACAGGTGGGCAATAGG 8223 37 100.0 35 ..................................... AATGCCTGTGGTGGCGGGACAGAGAATAGGGAGCG 8295 37 100.0 36 ..................................... GATCTGCAATCTACAGATTACGCTTTATACCTACAA 8368 37 100.0 38 ..................................... TATCGAGCGCTTTTTTATCGTGTTCCCACATCCAATTC 8443 37 100.0 35 ..................................... CATTCCAATTTTTAAACATTACTTCCTCTCCCTCT 8515 37 100.0 37 ..................................... GGATTATCCACACAGGAGTCTAGGTTGACTGTATTAA 8589 37 100.0 38 ..................................... CGCCTCAGTCTATTGAAGCAATGCGTCAACAGTTCTTG 8664 37 100.0 34 ..................................... GGCACACATATGCCCGGCATAGGGATGATCCACG 8735 37 100.0 37 ..................................... TGCAAAAAGTGCCAATAATCAGGGCGATTTTTGTTGA 8809 37 100.0 35 ..................................... GTACATCGCTGGATATGGCAATCGATGCTGATCGA 8881 37 100.0 37 ..................................... CAGCCATGCCGCTTGCCGCGGCTAAGCAGCAACTTCC 8955 37 100.0 38 ..................................... CAGCTGGCTCTCGACTTGGACTTAAAGGGAGAGAGGTT 9030 37 100.0 34 ..................................... AGGCATTTAGTAAATTAGGCGAGGGACTGAGCAC 9101 37 100.0 36 ..................................... CTTCGTAAGAAGTGGAAGAGATTCAAGGCTAAGTAG 9174 37 100.0 36 ..................................... CTTCGAGAGTACAGAGAAATTCCCATTCTTAAACGC 9247 37 100.0 34 ..................................... TGCGCTTCTAAAACCATCTTTGCAAACATCTGAA 9318 37 100.0 34 ..................................... ACGCGACAAGCTTCTTTGCTGGCGATGAGCATCT 9389 37 100.0 35 ..................................... AAATACCGCGAATGCCCAATTGTATCTGAGAATTT 9461 37 100.0 42 ..................................... TATATACCGGCAACAATTCAAGCTATCCAGAAGCGGGAAAAG 9540 37 100.0 33 ..................................... ACTAAGTGCAGATGCGATCGCATCGATGCACTC 9610 37 100.0 37 ..................................... CGCTTAGCGATCGCTAATGGGGTCGATCGCGGATCTG 9684 37 100.0 34 ..................................... GATATGTAATCAAACAAAAATTGAGGAGAAATCA 9755 37 100.0 35 ..................................... ACTGCTGATGAACTGCGATTCATCAGGGATGCTCT 9827 37 100.0 35 ..................................... AATTGTTGAAAAAATTGCAAGAGGCGATCACCGAA 9899 37 100.0 34 ..................................... ATTTCAAAAATTCTGAGAAAGCATAGTGCAACAA 9970 37 100.0 33 ..................................... ATACGACGATATAGATCCACCAGATGTGCCTCT 10040 37 100.0 36 ..................................... GACTGTATGGAAATCTTCATCGCCACTAAATGCATC 10113 37 100.0 33 ..................................... AAACAACTTCTTCGCCGATTCCAAAGCCTGCGA 10183 37 100.0 36 ..................................... GATCGCGCTAGCTATTGCAACCGGTAGGCGCCAAAG 10256 37 100.0 34 ..................................... AGTCTCTTGGAGGAGGGCAAGCAACTCGAGTCGG 10327 37 100.0 37 ..................................... GGAAGCCACCAACTGATTACATAACTTACATCCACTT 10401 37 100.0 33 ..................................... GGACATAAAGGAACAATTAATATAGATTCAGGA 10471 37 100.0 35 ..................................... GATCGAGAACTGGTACTACGTGGATGGCGTAGATT 10543 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ========================================== ================== 123 37 100.0 35 GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Left flank : CCTGACGGTACAGCAGCAAATATTCAACGCACAGACTCAATCAAAGATGGTGTGATTACAAACTCTTGGACGATCGCAACTGGTGATCCTATGGGTAAGCATAAAATAGAAGTTTATATTGGCGATCGCCGTATTGCTACTTTTGAGTTCGAGGTGGTTCCAGCTAAACGGCAAAAGCCAGCTCCAAAAGCGTAGTTACAAGTTTTGCTATAGTCGATAAATAAAGATTAATCTCTCTTCAGCTTAGAGTTGGTGCAAACCTGTAGGTGTTTAAAAAAAGCAGTCAAATTTAATGGCTACAAGCCCTACCTGTTATGGCTTTGAACCCTTTTACACTCAGATAGAGGTTTGCACCAATTCTGAAAGTCTTACCAGCAAAGCTTTTGACCTATTTTTTCATAATTCATCTTGACACCTCGATGGCTGAAAAGCTATATTTTGTCCAGGTCTGCACCACTGAACCTTGAAAACCATATACAGCAAAGCTCCTGAATCTAGCT # Right flank : CCGTAGTATGCATTTGACAAATTAAAGCTTACTGCTTGAGATTAGAACTTAAAGGCGTTGCAGAGAAAGCGGGATGATTTTGTTTTATCTTTTAATTGACAAAAACTCAATCCTTGGCGCTCTTGGCGTCTTGGTGGTTCATTATATCACCGCTACGAACAGACCAGCAAGACTGAAACTAGCAGTGGTAATTGCAAAAGTTCCCGTTTGCAATAAATTAACTAAAGTTCCTCCGATGACTGCACCCACAATTCCTAACAGCATTGTTGCCAGGATACCACCACCTTGGTAACCAGGATAAATTGCTTTGGCGATCGCGCCAGCCAACAAACCTAATACAATCCAAGCAAGAAGATTCATGATTCGACTCCTTAATAGTTGCGAACAGAATATAGTTGAAGATAGAGTTTTAGGCGTTGCATAATAGAGGGATGAATTGAGGTTATCTACTGTGCAATGTCCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACTTCAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 19188-37568 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMQG01000140.1 Fischerella thermalis BR2B NODE_214_length_37734_cov_41.935921, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 19188 37 100.0 35 ..................................... GCTAAGGTTTGGCAGATCTTCTCCCCGGAAGGCTT 19260 37 100.0 37 ..................................... GAGATCTCGGCCGCCTCGGCCGAGACCCCCAGCGCTA 19334 37 100.0 33 ..................................... CGGTTCCTGGACATCTATGGGCATCAAGTAAGA 19404 37 100.0 36 ..................................... ATTGTCTCTGCTCCGCCTGGAGTAAGGCTTGATAAT 19477 37 100.0 32 ..................................... CAGGCATCAAGAGACTGACCGCTGCTTGGACA 19546 37 100.0 36 ..................................... GGGGTATGGGTACGGGAGGCCCGCTCTCCACTTGTC 19619 37 100.0 33 ..................................... CTCTCTCCGAGAAATGGGCGATCGCCTCTTCAA 19689 37 100.0 34 ..................................... GGATACTTAGTATATTTGCGGCTCTGCTGATCAT 19760 37 100.0 33 ..................................... GCATCTATAAGGTATTCCTCTTCATTGGTGGTC 19830 37 100.0 34 ..................................... CGGCGATCACATTGCACTCCAGGCAGAACACCAA 19901 37 100.0 34 ..................................... CGGGGGCGGTATTTTGTGGCGCTAGCGGGATGCA 19972 37 100.0 33 ..................................... CTGGCGCAAAACTAACGCGCACCCCGCCATCAG 20042 37 100.0 38 ..................................... GCTTTAATTGTATCAGCGATCGCGGGCATGGAATGTGC 20117 37 100.0 35 ..................................... GTGTTCCACTCGGCGATCAAAGATTCAAGTCCTCC 20189 37 100.0 34 ..................................... CCAGTAACCCATGGGTTGCCATCCCGAAATGGAT 20260 37 100.0 34 ..................................... TCAATCGCCAGACCACCCGCCCATCGCGCGGCGA 20331 37 100.0 33 ..................................... GCTAAATACTGTTTTGTTGCTTCTTTGGGATTA 20401 37 100.0 36 ..................................... GATACTATTCGAGTAGATTCCCATTCTTCCATTACT 20474 37 100.0 34 ..................................... CTTGTAGAGCAGTTCTTTGATTCGTTGCAGGTTT 20545 37 100.0 33 ..................................... ACCAACTCATCGATCACCAGCAGGCAACCGCCA 20615 37 100.0 35 ..................................... TGGAGTTCACAAACATATTGAGGAAACCTCTCTGA 20687 37 100.0 34 ..................................... GTACAGATATGGGTACACAGCAGCACCACATGTA 20758 37 100.0 35 ..................................... TTACAGCTCTGCCGTATCGCACATAATCGGCGCTA 20830 37 100.0 36 ..................................... TTTGCTGGCTCTTCTCTTCGGGGGAGAGTTTTTTGT 20903 37 100.0 34 ..................................... GCCACCCACAACTATATATATGTACGCATATCGA 20974 37 100.0 33 ..................................... ACTAATGCCGAAGCGAGCAAATGGGAGATGGCA 21044 37 100.0 33 ..................................... GCGACAAATGCCCCCAGCGCTGGTTTCACCATT 21114 37 100.0 35 ..................................... ATCGGCGGATCCCTTGCCAGTGCCGATGACACCTC 21186 37 100.0 35 ..................................... ATACATGAAGTCATCATAAATCTGCTCTTACAGAT 21258 37 100.0 35 ..................................... AAAGCCGTAAGCGCATTTGTCGGCGAATTTCTAAA 21330 37 100.0 37 ..................................... CGATAGCCATCGACGCCGATCCCAACGACGAGACCAG 21404 37 100.0 32 ..................................... TATATATATATGGGAAATTCTGTGCAATTACC 21473 37 100.0 36 ..................................... CCGTACCAGCTCAGCCTGCCTAAGAGCATTCGTGAG 21546 37 100.0 34 ..................................... CCCCGTATCTAATCCCAGCGGCAGCGATCGCGTG 21617 37 100.0 37 ..................................... GGGGAAGCCGTCCTAGAAGGACGGGGCTTGAATCCCA 21691 37 100.0 35 ..................................... GGGGCTGGTGTATTCCGCAGCCCATAAAATTGGCT 21763 37 100.0 37 ..................................... CAATCAAATTATTAAGTCCATGGAGTAACTGTAACTA 21837 37 100.0 34 ..................................... AGAGTAATTAGGGATTAGTATGGCGACTAAGAAG 21908 37 100.0 36 ..................................... GGTCGCATCAGCGCGATCGCTCCCCTCCACTGTGTC 21981 37 100.0 31 ..................................... GGCGACTCGTCGCTCTGCGCTATACCATGAA 22049 37 100.0 34 ..................................... ACTTATGGCTCTGCTCAATCACTGTCGTCTGGTG 22120 37 100.0 36 ..................................... GCGCATTCTCCATGGATGCCGACAACTTCCCCTTCC 22193 37 100.0 35 ..................................... TGCCTCGGCGGTAGCTGCGCCACCCTTTTCGGAGG 22265 37 100.0 34 ..................................... ATTTGGGAGGATCGCTGAAGCACTTAACACAGTG 22336 37 100.0 35 ..................................... ACACAGACCAAATGGATTTTAAGACTTGAGACACT 22408 37 100.0 35 ..................................... AGTGCAGGCGAAGTATCGGGGATACAAGGCTTGAA 22480 37 100.0 33 ..................................... GGGGAGCGATCGCGGCTTTGGAAGCTTCGGGTG 22550 37 100.0 36 ..................................... TCCATCGCTTATCGCGATGGAAAACCCGGAGGCATA 22623 37 100.0 34 ..................................... AGAAAATCCTATGATGGGGTATTGAGAAAAAAAG 22694 37 100.0 41 ..................................... CAAACGCAACTATGAAGCGACCAAGACCGACCGCCTCCGAG 22772 37 100.0 34 ..................................... CCGTTCGACGATCGCTCTGCTCGAAGAATAGCGA 22843 37 100.0 35 ..................................... GCTGAGTTGTGCCTAGACGCAATCCGAGGGACAGA 22915 37 100.0 37 ..................................... GGTATAGCCCAATTCTGCAATCCAGAGGAGTACGGTG 22989 37 100.0 37 ..................................... GACAACCTCCAGAGTTTTTAGCTCTGCCTCCAATAGA 23063 37 100.0 39 ..................................... TCCTTGGCGAATATCTACCATTCTATCGCGGGTGCATCG 23139 37 100.0 35 ..................................... CTGAAGAAATTCAGGGACTGTATCAGATGCGAGCA 23211 37 100.0 34 ..................................... TAGATAGCCTGGGACAGAGGAACGAAGGCGCATT 23282 37 100.0 32 ..................................... AGCCATCTGAGCTGCCAGTCTTGGCGCGAAAA 23351 37 100.0 36 ..................................... TGTGCGCCCCACTACGCTTATGGGGGAGAGCGATTT 23424 37 100.0 34 ..................................... CGTGCCGGAAGCTTTACCGCAGGCATGATCGAGG 23495 37 100.0 35 ..................................... CCCGCTCCTATGGTGGCTAGCTGCCACCCCTCGCT 23567 37 100.0 31 ..................................... TCTCTCGCCGATAGCTGCTCGCGCAAGGAGG 23635 37 100.0 32 ..................................... GATGCATACCAGCGAGCAAATGCCAGCCCGAA 23704 37 100.0 35 ..................................... TTGGCAATTCACAACCACGCAATTTGACAGCACGA 23776 37 100.0 34 ..................................... GCAGATTCATACTGAAGACGAATCATCAATTCTT 23847 37 100.0 41 ..................................... TTTTGGCAATTGAGTGCAACCCCCGCAGGAATTGTAGCGAT 23925 37 100.0 34 ..................................... GATTCCTCTTAAAGTTCTCCGATCTCAGAATCAG 23996 37 100.0 33 ..................................... ACTACGACTCCGCAGCAAGAGCTTTCGCTCTTG 24066 37 100.0 41 ..................................... CGCTACATGGTGAATGGAGCCGAGAAATCCATCCGCCTTCG 24144 37 100.0 34 ..................................... AGCTTATTGCCACCATAGGGTGATTCGCTGATCT 24215 37 100.0 35 ..................................... AATGATGGCTCCTTGCAGCCTGATGAAATATTTGC 24287 37 100.0 33 ..................................... CAGAAATATATCGAGGATAATAAACTATCCCTA 24357 37 100.0 34 ..................................... CAGTGTGAATCGCTGCACCTACGACCTAGAAAAG 24428 37 100.0 31 ..................................... TTCTCTCTTGACCCCTCTCGTGAGGAGGAAA 24496 37 100.0 34 ..................................... TCTCCTCTTGGGATAGGACCAGCCCCGAAGACTG 24567 37 100.0 37 ..................................... TCCTGGTGCGATCGCGATGGGGGAAGTATAGGTCTGG 24641 37 100.0 37 ..................................... AGAATCCAGCATTCCTTCTAAAAGTAGCAGATTTGTT 24715 37 100.0 33 ..................................... CATTGCCTGAGCAAGAGGGACAACTCATGGACC 24785 37 100.0 34 ..................................... CCCAGTACCGGGTTCACTGACGCTGCGACGATGG 24856 37 100.0 38 ..................................... TAAAAGGGACTTATATCGATCTTCATCGAGAATGATTT 24931 37 100.0 38 ..................................... AGCGGCTTGATGCAGTCGGCTTTGGGAGGCGCAGCGAA 25006 37 100.0 40 ..................................... ATCTCCAGCCCAGCGGATGGAGAGAGAGGGATTCTGTTCG 25083 37 100.0 35 ..................................... GAGCAAGATATCGACGTAGACTTTTTGACTACCGA 25155 37 100.0 35 ..................................... GTAGTCCTCCCTCACGATCGCCGCGATCACCTTTC 25227 37 100.0 38 ..................................... TACGGGCACGTGTACGCAGGCATCACCATCGTCCGTGC 25302 37 100.0 39 ..................................... TCCATCTTTCTTTTTCTCCTTGGTATTTGGACATCTCCA 25378 37 100.0 34 ..................................... GGTGGCGATCGCAGCCAATCTACTGAGAGGAAAT 25449 37 100.0 34 ..................................... GAGATAGCTCATATTGCACAGTGATTCACTCTGA 25520 37 100.0 33 ..................................... AAAGACCCCTACTACTTCCGCTGGGGACAGAGC 25590 37 100.0 33 ..................................... TGCTCCCCACCCACGCCACGAGGCAGACATAGC 25660 37 100.0 34 ..................................... CGCTAGTAGGTAGAGAGTGCCCTGGCTGTAGTCT 25731 37 100.0 35 ..................................... AGAGAATACTGCACAGAATTCTCCATATATATATA 25803 37 100.0 36 ..................................... GCTGTCCGCCTTGGGGTCGATGAAGAAAACTCGTCG 25876 37 100.0 35 ..................................... AAAATCACGCCATCATTCGAGTACGTGGAAATCGA 25948 37 100.0 35 ..................................... TGAGATTATCCGCCTCACCACGACCAAGCAAACGC 26020 37 100.0 35 ..................................... CCCAGAGAAGGGGATCTATGGATTCCCTCTCTGAC 26092 37 100.0 35 ..................................... GCGATAGAGCAGCTCCTTAATCCGTTGCAAGTTTT 26164 37 100.0 36 ..................................... ACTGGGGAAGGTGAGATCAGGGGTCAACAGTCCCTG 26237 37 100.0 38 ..................................... GCGGATATCTTTCTAGGGATATCCCTCGCTTCTCCATC 26312 37 100.0 35 ..................................... ATCCTAGAGAAGCGATTAGCAGCCATGTCAGTAAG 26384 37 100.0 33 ..................................... GTGTCCCAGGAGCGGGCAATCCCTATGCGATCG 26454 37 100.0 40 ..................................... GATTTCCTTAGTGGAGTAGGCGTGTATTACCTGCAATTGC 26531 37 100.0 33 ..................................... GCCAAATCCAGCGCCACCGAAGCGCGATTCTCG 26601 37 100.0 33 ..................................... CCATTTTGCTCGAGCTTGGATTCAGCTTTATCC 26671 37 100.0 36 ..................................... AGCGATCGCGGCGTAGTTCGTGTCCTTGCCTGTCCC 26744 37 100.0 34 ..................................... AAAACACGATAGATTTCCCGCACCTGTAGCAGCT 26815 37 100.0 36 ..................................... CTCCCGAAAGCGAGGGACAGCAGAGTAATGGAGGAA 26888 37 100.0 36 ..................................... ACGTAGAACCCTTCGAGAGTATTACGATGGGGGCGA 26961 37 100.0 33 ..................................... CCCAGTACCGGGTTCACCGACGCTGCGACGATG 27031 37 100.0 33 ..................................... GCGGAGGAGTGCGATCGCTGGCTGCACACTTTT 27101 37 100.0 40 ..................................... GTCACAAGCTCTGGGACGAACAAGCATCCACCAGCGGAAG 27178 37 100.0 34 ..................................... GTGGCTGTAAGACGCCTTACCGAGAGATTCGAGA 27249 37 100.0 34 ..................................... CTTGTTTGCCATTTGTTATTACTCCAATCAATTC 27320 37 100.0 41 ..................................... CCGTTGAAGATTTCCATTTGAATTTGAGCCTCCTCGATTGA 27398 37 100.0 34 ..................................... CAGATCTCCCAACTCTTGGGCGATCTGGCAGAGA 27469 37 100.0 33 ..................................... CGATGATCGAAGCTCATCCAAGCTCCGATTCGC 27539 37 100.0 32 ..................................... GCCCCTTTTTTTGGGCTGGTACGTGCTGTGGA 27608 37 100.0 34 ..................................... AAGGGCGCTTGGTTGTCCCGGGGATGCTGATTAC 27679 37 100.0 43 ..................................... ATCCCCTCTAGCTTCCTCGATGAGGGATGGGCAATCGCGGTGA 27759 37 100.0 33 ..................................... ATATATCGATCAGCATCGGCTGCCATATCCAGC 27829 37 100.0 37 ..................................... GAGAATTGGTAAATACACAGATGCATTTGCCAATAAC 27903 37 100.0 36 ..................................... GTGGCGATCAATCGAAGGGCAGTGCCCACAGGCAGA 27976 37 100.0 34 ..................................... GCTGAATGGCTTCAAGGGAATAATCTGCTAGAGC 28047 37 100.0 34 ..................................... AGACTAGGATGAGATCAGACAGCTAGGGAAATGG 28118 37 100.0 34 ..................................... AGCCTTTCCTTTTTCCTTAGGAGATGTGAGGTAC 28189 37 100.0 34 ..................................... AGCAGCCCCTGATAGTCCTTCCTGAGAGGGGCGT 28260 37 100.0 35 ..................................... TGATGATAACACCATGAAGCACCCAAGACTACGTG 28332 37 100.0 33 ..................................... CCTTCTACATCAATGCTGTGAAGGGATTATCTG 28402 37 100.0 35 ..................................... CTCGAATAGCACTTCCTACTCGCTCAATGTGGCGA 28474 37 100.0 45 ..................................... GAATTCACTCGCCTCCCCTTGGGCGAGGTGCTGCGCCACGATCGC 28556 37 100.0 34 ..................................... ATCGGGAATGACGTAGCGACCGATCGAGGGGACC 28627 37 100.0 32 ..................................... CGATCGCACATTCCAGAAGAGGCGCGATCGCA 28696 37 100.0 34 ..................................... AATTAAGAATTCGACAAAAGTTAACATTCTAGTG 28767 37 100.0 37 ..................................... CGGGCTGCCGTGCCTGAGAGGCAGCCCTTTGACAAAG 28841 37 100.0 33 ..................................... TCTGTAGAGATATCTCCTTCCAACGTGGCAGTG 28911 37 100.0 34 ..................................... CGGGCTTTCATTGAGTCGGTGCGCGATCGCGGGT 28982 37 100.0 36 ..................................... CAAAATTCCAGCATCACGCGCCAGAGCTACGATATT 29055 37 100.0 34 ..................................... TGGGTAGACTCATCCGATCCAATAAATAATTTTC 29126 37 100.0 36 ..................................... CCTTATTGAGAATGCCTCGATTTTTCCTCTTTCTGA 29199 37 100.0 34 ..................................... GCGGTTTTTTGACGGTATCTTCCGGGTATTGACT 29270 37 100.0 32 ..................................... GATGACTCGTAGATCACAGGCATTTTTAGCAA 29339 37 100.0 34 ..................................... AAATATGACGACCCAGTAAAATATGACGACCCAC 29410 37 100.0 37 ..................................... ATGGGCGATCGCACTACCGGCACCACCCCGCCATCGG 29484 37 100.0 38 ..................................... CGATCGCTTCCATTTTTAGACCTGCCACCCAAAGCCGC 29559 37 100.0 32 ..................................... CGCGATGCAGGTATCATCGAGCAGTGGACGGG 29628 37 100.0 38 ..................................... CCGATAATGGGGTGGTGTACGGAGAAGGTGTACGGAGG 29703 37 100.0 36 ..................................... GCTTCTACCTCTAAAAAAGCAAGATTGCAGTAGAGT 29776 37 100.0 33 ..................................... CATAGTTGCAAAACTGGCTATGCCCGATATCAC 29846 37 100.0 35 ..................................... ATTTATCCTCCATCCTGGGAAGGCATCCTGGAAAT 29918 37 100.0 35 ..................................... GCAAATCGATCCAAGGAGCTAGCTGCGGAACACCA 29990 37 100.0 35 ..................................... TCTATATCGAACCTATATTAGCTATAGAGATGAGA 30062 37 100.0 39 ..................................... TGGGGGGAGAGCTTCCTTAATCTTGGATCCGCCGCGATC 30138 37 100.0 35 ..................................... CGGATAGCTAGCTGGGAGAATAGCTGCCCCCAAAG 30210 37 100.0 40 ..................................... GGAGAAAACTGCACAGATTTTCCTATATTAATAGAGCAAA 30287 37 100.0 34 ..................................... AACGGATACTACTATCTAGCTTCTGAATCAAGCT 30358 37 100.0 33 ..................................... TTAAACGATGATAGATGATTTAAACTGCGAAAA 30428 37 100.0 36 ..................................... TACTAAAGATATCCTCGATAGATGCCATCGGGTTTC 30501 37 100.0 39 ..................................... TGCATATGGCAAGAACTACGGACTACGAAGGGCAAAAGA 30577 37 100.0 34 ..................................... ATTGTGGATACATGTCCCCAGTGAGGAACAAATG 30648 37 100.0 34 ..................................... CTCCAGAGCCACACCCAGCCCGTTGGCGATACTT 30719 37 100.0 32 ..................................... CGGGACTTCGACGCTGGCATCTTTCTTCCCGC 30788 37 100.0 35 ..................................... CGGTGGAGTACCGGTGGAGTGCCACCGCGATACCC 30860 37 100.0 34 ..................................... TTTTATTGGATCTCTGCACAACAATTCTAAAAAA 30931 37 100.0 36 ..................................... CGCGATCGCTGGAGAATACATTGATGATCCCCTCGA 31004 37 100.0 34 ..................................... AATATAGAGATATAAATAGATACAACAAGGAGAC 31075 37 100.0 35 ..................................... CTAAGAGCATGACCGATAACTTCTACCTCTCTATG 31147 37 100.0 35 ..................................... TACACCCACCCCGGATTTGGTGTTGGCGTCACCGG 31219 37 100.0 36 ..................................... TTGAGTTTCACCGACCAATTTGAGAACCCAGTCTAT 31292 37 100.0 39 ..................................... GGAGAGCAAACGGATTCGTCGGAGAGTCCGGTGGTCAAA 31368 37 100.0 33 ..................................... CCTCCAAAATCGCTTTGATGGGTGCGATCGCTT 31438 37 100.0 34 ..................................... CGTGTTTAGCGGAAAAGATGCCCGTGACAGTGCC 31509 37 100.0 33 ..................................... TTGGGCAATCCCGTAAACCCGCTGCCGACCTTC 31579 37 100.0 34 ..................................... GAAAAGATTTCGATAATTGCCCTAAAATCGATGG 31650 37 100.0 36 ..................................... ATTCTGTTTTTCATAGCAAAAAAAAGAGCGATCGCT 31723 37 100.0 36 ..................................... CCATCCCCCCAGACTGACCAGCGGGTATCGCTGATG 31796 37 100.0 34 ..................................... GAAGGGGTGTAGTTCCTAGCTCTGATGGCTTTTT 31867 37 100.0 36 ..................................... CATCAGTGATGGTGCAATGTCCGGCACGTGGTCAGC 31940 37 100.0 39 ..................................... AAAAGCAGGTCACATTTATCCAGTCCCCCCAGTTTCTGG 32016 37 100.0 36 ..................................... CTCAAACATTACTCAAAATTCTACGACTGGCTATCA 32089 37 100.0 35 ..................................... AATCTTTAGCCGAATAGTGGTAGGCGCTTGCACAA 32161 37 100.0 37 ..................................... GAAGAGATACCGACCTACACGTACCACGCCTACTAAA 32235 37 100.0 35 ..................................... GGCGATAAGATCGCCAAAGAGTACAAGCTGATTAG 32307 37 100.0 33 ..................................... TGACGACCCCGAACGCGCGTCGTGGAAGGAACT 32377 37 100.0 39 ..................................... GGAGGATGAGCGAGATACACGGGATGAATACGGACTTCC 32453 37 100.0 35 ..................................... CTTCATCGACCGCTGCCGCCATAGGGGACTTGCGA 32525 37 100.0 41 ..................................... CTGCAAGCAACCTATAGATCATCTAGAAAAGCTCTCCGACA 32603 37 100.0 34 ..................................... GAGCGATCGATGGTGCCTGGAGGCACCACTTCGA 32674 37 100.0 35 ..................................... ACACCATCAATAATAGTGACTCGACCATTGACACC 32746 37 100.0 34 ..................................... TAATCCCAGCCAAATCGTCGCAGACATCATCAAG 32817 37 100.0 37 ..................................... CTGGGGTGATGGGAGTATTGCTGGGGGTGGGAATAAA 32891 37 100.0 37 ..................................... CTCCATCTTTTCCTGGAATCCTGCGATTCCGCCTTTT 32965 37 100.0 43 ..................................... CAATGCTGAAATATCTTGTGAAAGGCAGGGATAAGGAAATCCG 33045 37 100.0 33 ..................................... ACTTTACCATAGGCTCTCTTGTAGTCCATCATC 33115 37 100.0 34 ..................................... CCGAAACGATATGAAAAAGAAATGCGATACCTGC 33186 37 100.0 33 ..................................... TATCCTGAGTGTCCATTGGTGTGGGTAAATCAA 33256 37 100.0 34 ..................................... CAATACATTTATCGAGAACTTATCAGAGCTGGAG 33327 37 100.0 43 ..................................... ATTATCAATAATCTTTGATAACTCTATTTGGTAATCAAAAGGC 33407 37 100.0 41 ..................................... CCACGATCGCAGCTCGGATGGAGTGGCGCTCAAGGCAGCCG 33485 37 100.0 36 ..................................... CTCCGACAGTTTTTTGCTGTGGCACGCCCGAAAAGA 33558 37 100.0 33 ..................................... TTTTCTCAGTTTCATTCACCCCCAGAGCAGCAG 33628 37 100.0 34 ..................................... CTTAGCGGTGCATAGGCACGGGTGCGGTGCGCGA 33699 37 100.0 34 ..................................... TTTTGCCGCGATCTGCCGGAAACTCGACCATAAT 33770 37 100.0 35 ..................................... CCCCGAATCGTCGAACTGGTTTATCACCAGGGTCG 33842 37 100.0 33 ..................................... TCACTCCCTTTATTTCCGCCTCCCCGATCCCTA 33912 37 100.0 34 ..................................... TAAAATCACCGATCACTTCCAGAGCGGGTACGTA 33983 37 100.0 36 ..................................... CGGGCTGGCAGTGTTGGGGTGCCCTACCCCAGAATC 34056 37 100.0 38 ..................................... GAGAAGCTCCTGATTCCCACCGGCTCATCATCGTGGAA 34131 37 100.0 34 ..................................... TTCGGGATCCTGGGCGATCCCGTAAACGCGCTGG 34202 37 100.0 33 ..................................... GCATCCCGATCTCCTGGCACATCCCTTGGCAAG 34272 37 100.0 35 ..................................... ACACGCTCGTACTGCAAAACTCCACCATACGAATC 34344 37 100.0 33 ..................................... TTTCCTTCTTTGAGCAGTGCTTCGGTGCGATCG 34414 37 100.0 35 ..................................... GGGGATCAACGCCTACCAACTCGCCCCTCAATTGT 34486 37 100.0 34 ..................................... GCCACCTCCATCGATGCCGAAGCCCTCGCTCCCG 34557 37 100.0 35 ..................................... CCGAGGGCTGGTGGGCGCTGCCTCTTCTGCCTGGA 34629 37 100.0 34 ..................................... AACCTGCGACCCTGGAGTCGCCCCAAGCCGAAGG 34700 37 100.0 36 ..................................... TAGTGCGAAAAGATCGAGTTCCTGGCGCCCATCGAA 34773 37 100.0 41 ..................................... GCTGGATCATCAAAAGAGGATGCTCGCCTACCGCACCCAAT 34851 37 100.0 38 ..................................... CTTTTCGAGCTATTCCCTACCTCGCGCTTGATCCTGAA 34926 37 100.0 36 ..................................... CCTCTGGGATGGAGAAGAGGCTTGATTCCGCCTCAT 34999 37 100.0 34 ..................................... ACGCTGAATGGATTCTCTAGTGCAAATTCGATTG 35070 37 100.0 36 ..................................... CTTTGATTGAACGAGAGCTAGAAACATTGGTAAAAG 35143 37 100.0 34 ..................................... ATCGCGCATGACCAGGGAAAGCTGCATCGAGCAC 35214 37 100.0 38 ..................................... ACAGCCTCAGCTTTGAGCTTGAAGCCCATATCAAACAG 35289 37 100.0 35 ..................................... AGGGTACACGAACCGCGCTCCTCTCGCCGAAGTAA 35361 37 100.0 36 ..................................... TTTACCTAACAAGCCATATGTGACTGTCTATGATCC 35434 37 100.0 34 ..................................... AAGCATATTGTTTCACTATCTCTTGTGCTTTATG 35505 37 100.0 36 ..................................... ATTCCAGAGATGCTCCCCAGAGGCGAAACGGTTATT 35578 37 100.0 34 ..................................... GACGAAATCCAAGGACGGATGGCTGGAGAGTTGG 35649 37 100.0 34 ..................................... GCGATCGCACCGGGATCCCGCGGTTGAATACCGC 35720 37 100.0 40 ..................................... CGGTGTCGTAGGCTTGTTTGTGATTCCTCACGACGCGCCT 35797 37 100.0 37 ..................................... CTCCTCTGCGTACCGAGAAACCCTCTCGGCGATCGCT 35871 37 100.0 33 ..................................... AACTAGATGGAAAGAGAAACTTGGCGGTAAAGC 35941 37 100.0 34 ..................................... CTCTATACATCCAAGTGCCTCTGGTGCTCCTATG 36012 37 100.0 37 ..................................... TCTCTGAAGTCTCAGTGGTAGTCGGACGTATAAGCGG 36086 37 100.0 33 ..................................... GTCTCGGAGCTGAATGAGCCTCCCAATGGATAG 36156 37 100.0 35 ..................................... CCACCCTGACCAGTAGCTTGGAGTTATGCAGATAG 36228 37 100.0 37 ..................................... ATCCTCTGTCCTCAGGCAGTCGATCCTTGGGGCACTG 36302 37 100.0 33 ..................................... TCGGCAATGGATGCGGCATTACTTGGCAACCCG 36372 37 100.0 34 ..................................... TAGGTGAACTTCAGAAGCACTTTGGTATCCCATA 36443 37 100.0 34 ..................................... TGGAACCACTTGTGCAGGTATTTGACTCGCTCAA 36514 37 100.0 38 ..................................... CCTCGGCAGCCCTAGTACCATTAGCACCTACAACCATC 36589 37 100.0 35 ..................................... TACAACACCTTTGTAATCCAATGCACGTATTAGTA 36661 37 100.0 36 ..................................... TGGGAATGGCGATCGCTGATTAAGCGCCATTTCCAA 36734 37 100.0 36 ..................................... TCCATCAAGTCCAGCGCGATCGCCAGCTGACGATGT 36807 37 100.0 34 ..................................... CCCAGGCGATCGCCTCCAGCTGAAAGTTCCGGAA 36878 37 100.0 41 ..................................... CAGTGGCATAGTCATTACAGAATTGATTCTCCCGAGATAGC 36956 37 100.0 33 ..................................... CATAGTCTTCGATGTCGAAAGAGAGTCCAACCA 37026 37 100.0 33 ..................................... CGAGAATTCGGCTGAATTCTCGCTGATTGGTGA 37096 37 100.0 34 ..................................... TCTGTCCTGACTCGGCAATCACAATCGTAAATGG 37167 37 100.0 36 ..................................... GGTGCATGGGAAAGAGCACAAGATGACATCGTATTT 37240 37 100.0 38 ..................................... TGGTGACATCCCATTTAATCCGCCAAGTTTATCCTGAG 37315 37 100.0 33 ..................................... ATGGGGGCGATCGCATGGCTTTTATCAGTCGCC 37385 37 100.0 33 ..................................... CTAGAAATTCAGCAGCATGTTGAGGTCGCCAAA 37455 37 100.0 40 ..................................... GCTTGGCGCAAGTGCTTTGACAGGTGCTTTAATCGGTGGA 37532 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ============================================= ================== 255 37 100.0 35 GTTGAAATCAACTAAAATCCCTATCAGGGATTGAAAC # Left flank : GGTGGTGTGGAAGCAACGCCAAAAGTCTGGGATCTAGCCGCTGCTTGGGTAATAGTTAAGGCTGCGGGAGGAAGTTGGATCTCACTCAACTCAGAACCTTTTGCTTTATCTGCTGGTGTTGATTATAGCGATCGCTCTTTCCCCACTTTGGTTGTCAGTCGTCCAGAATTGGTGTCTACATTTAAGCCATATTTGGAAAATTTAAAGATTTGAACTTTGGCGTTCTCCAAGTTGCTTGGTTGACTTTATGGTGCAGATGGGTAGGTGTAGAAATCAGTTAGCCCATAAAAAGTACCTTAATCCCTGTAACAGCAATAGTTTCATCGATTAAGTAGCGAAAATAGGTCTGCACCAATAGCAAAACGCTTACTATACAAAGCTTTCAGGCTGAAATTTTGAGAGGCTCTCTTGTCACCTAATGGCTGAAATGATATTATGATGACAGGTTTGCACCACTGTACCTTGAAAACTAAATACTGTAAGGGTTTAAGTTTGTAGCG # Right flank : TGGTGAGATTTACGTATAGCACTTTAAAATTAGGAGACTAAAAAAACCAAACTTATACGCAAAACCTTACTTAAATCTATAATTTAAAAATAAAATCAGCGATCGCCACCTCATCTTTACCTGTTATAGCTTCTTGGGGAGGACTCAGTAAAACAGATCGCTGCATTAATCAGGACTTACGCAACTGACACAATGCGATTGCTATTCAATAGTACATAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAACTAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //