Array 1 165971-163383 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFCMT010000015.1 Klebsiella pneumoniae strain 1493e NODE_15_length_167150_cov_22.432527, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 165970 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 165909 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 165848 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 165787 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 165726 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 165665 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 165604 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 165543 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 165482 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 165421 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 165360 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 165299 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 165238 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 165177 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 165116 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 165055 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 164994 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 164933 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 164872 29 100.0 10 ............................. ACATAGCGCC Deletion [164834] 164833 29 55.2 0 CGA.A.G.A...........T.GTGTT.C - Deletion [164805] 164804 22 75.9 32 -------...................... GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 164750 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 164689 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 164628 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 164567 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 164506 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 164445 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 164384 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 164323 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 164262 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 164201 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 164140 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 164079 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 164018 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 163957 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 163896 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 163835 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 163774 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 163713 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 163652 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 163591 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 163530 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 163469 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 163411 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 44 29 97.7 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //