Array 1 24633-23409 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_OABN01000022.1 Neisseria meningitidis strain Neisseria meningitidis isolate R629, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     24632	    36	  97.2	    30	........G...........................	GGACGGCGGTTCTAAAATATGAAAACTCAA	
     24566	    36	 100.0	    30	....................................	TATCATGATGAGCATATTTATGAAGAGGTA	
     24500	    36	 100.0	    30	....................................	CTGGAAGACTGGTAAGAAACGAGATGCACA	
     24434	    36	 100.0	    30	....................................	CGATTTACCACCCATAAAACCACCTCAAAA	
     24368	    36	 100.0	    30	....................................	TAATTTGCGTTTCGTGTCGCTCATAAACCC	
     24302	    36	 100.0	    30	....................................	CGTAACCGGCAAGGCTTATTTGTCCAACGA	
     24236	    36	 100.0	    30	....................................	ATAAATCAATACCGTGAAAACCTCATGTGT	
     24170	    36	 100.0	    30	....................................	AAAAACTTTTTAGGGGGGTCGGAAAAATAC	
     24104	    36	 100.0	    30	....................................	GAGCATCTATTAGGGGTGAAGGTAGATCTT	
     24038	    36	 100.0	    30	....................................	AGACTTAGCACGTTTAACTTGCTTAACAAG	
     23972	    36	 100.0	    30	....................................	CAAAAACTTTTTAGGGGGGTCGAAAAATAC	
     23906	    36	 100.0	    30	....................................	CAAAGCTATAAACACGTTTATCTGTTGTTA	
     23840	    36	 100.0	    30	....................................	ATGGGGTATGCAATTACATCGCTTGGGTTT	
     23774	    36	 100.0	    30	....................................	AAATTATACCAATGGCGAAAATCTCGGGCG	
     23708	    36	 100.0	    30	....................................	GCTCAGTTGGAACAATGAATACATCTTGAA	
     23642	    36	 100.0	    30	....................................	ATAGGTTCTATTAATACGTCTTTCGTCTTC	
     23576	    36	 100.0	    30	....................................	TTTTCCAGCGCGATGAGATACCCGGCATAG	
     23510	    36	 100.0	    30	....................................	CAAAGCTGCGGTATGTCGGGATTGTCTTCA	
     23444	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        19	    36	  99.9	    30	GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG
# Right flank :  ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATGCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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