Array 1 95585-95017 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGVK010000013.1 Klebsiella michiganensis strain 4928STDY7071131, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 95584 28 100.0 32 ............................ AATAATCCGCAACCTGGCGCATGGGAGGATAT 95524 28 100.0 32 ............................ TAGGCGTGATCACAGCCTCGGAAGTTCACAAC 95464 28 100.0 32 ............................ TTAATCGACTCAGCTTTCCAGCGGTTAGGATT 95404 28 100.0 32 ............................ AAAATGGCCGGAGGCGATCCGCTGCAGGGCTT 95344 28 100.0 32 ............................ GAGCTAAGGAGGCCGAAAAATGAGTAAGTCAT 95284 28 100.0 32 ............................ TCGCGGCGAACGGCTCTCAAGCGGGTGAAGGA 95224 28 100.0 32 ............................ CACATATCGCCGAGAGAAAAGTCGATACGCTC 95164 28 100.0 32 ............................ TATATCCCGATCCGGGGCGGATATTCGGAACC 95104 28 100.0 32 ............................ CTGGACAGCCAATGCGACAGGTTATGGCTTTA 95044 28 78.6 0 C...........A...........TGGT | ========== ====== ====== ====== ============================ ================================ ================== 10 28 97.9 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : ATCAAAGGATGGCGTTGCGTCAGCCGGGTGCAGGTGAAAAGCAGCCCCGAGCGGCTGATGCGCCGTTCGGTGAAAAAAGGCTGGATAACGCAGGATGAAGCAGATGCGCGATTGCTTACCATGCGGGGCGAGTCGACAACACTCCCCTGGCTGAATATGAAAAGCCTTTCAAATGGACAGATATTTCCGCTATTTATTTGTCACGGCGAGTTGCGGGCGCAGCGCGTCGCGGGAACATTCAGTAGCTATGGGCTGAGCCATATCGCGACTGTCCCTTGGTTTTAGCATTTCGGTGAGAACTTTCTTGTTGAATGTTAAAACGAACCAGAACCGGCGCTGTATTTTGCGCCGGTTATTCGATCGCTACAGAAACCCTTTCTTATGATGAGCCTCTATCTTGTTGATTTTACAAGCTAGTTATATAAGGGGCGGAAAAAGGGGGTTGATGAGATTGAGGTTTTTTTGATTTTAAATCAAACTTTTACGTTGTTTTGGTTTCA # Right flank : GGATTAAGCATATGGTTATAGAAAGATAATTCGAAGCTTGCTCTCACAGAGAGCTACGGTCATGAATAGCGTGAGTTTATAACTAAATAATGGTATCAGGCAGGAATATAAAATGAAAAGACCGGGAATTATCCCGGCCTTCAGCATCTGGCGCGCTAAGCGCGAAAACGATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAGAATGCGGATGTAGTTTTTACGCATTTTACCGGAAATATGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGGAACATAGTGTTAGGCAGCGTATCAAGTACGGTGCCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAGTCCTCTGGGGTATCACTACCGTAGTTTTGAACCGGCAAGATAATGCCGAAGTTCAGCAAGTATGTAAAGTTTTACGTCAAATCGCCGAAGTAGTTTTGGCGCATTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 104699-104011 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGVK010000013.1 Klebsiella michiganensis strain 4928STDY7071131, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 104698 28 100.0 32 ............................ TGTAGTGTTGTTCTAAGTTCATGCCCCAATTT 104638 28 100.0 32 ............................ TGGCGGGTACGTTCGTCGTCCTCGCGGCGATT 104578 28 100.0 32 ............................ TTGGGGCGCGGTATGGCTTCGGTGAATGGGCA 104518 28 100.0 32 ............................ ACAGGGAGAGCCTCTCCCGCGTGGTTTTTATG 104458 28 100.0 32 ............................ AGAAACAGGCGCGGAAAATCCCTGCAAAGGGT 104398 28 100.0 32 ............................ CATGACCCACGCAGGGCAGAACGTCGTATAGA 104338 28 100.0 32 ............................ GTAAAAAACTCCCTACTGTGCTTTACCGGCAG 104278 28 100.0 32 ............................ AGGTGACCGAAAGGTACTTATCAGGTTCAAAC 104218 28 100.0 32 ............................ AGGTGACCGAAAGGTACTTATCAGGTTCAAAC 104158 28 100.0 32 ............................ TGAGAGTTCGCGCCAATATTGCACGCAGCCGT 104098 28 100.0 32 ............................ GTACTGACCGGGGAGAGGACCACTCGTTTTAC 104038 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 12 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTTATCCATCAGGTGGTGGATAAATTTATCGTCGAGCTGCAGGTTCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTCAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGCTACGACCGGGCCATGGGCGCGCGTCCGATGGCGCGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAACGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGACAGGTGACCGTTGAACTGGATAAAGAGAAAAATGCGCTGACCTACGACTTCCAGAGTGCGCAGAAGCACAAACCGGAAGCGGCGCATTAAGTTTCGGTACTCAGTGACAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCTATGTCCTGGACCCTTTTTTATTCCACTTTTTAACTTGTTGATTTTAATAAAGAGAAAATATAGCGTAAAATTATGGTGGCAGAGAGGATGTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTTGTTCGTTCA # Right flank : AGAGCTTGCCCACACTGCTGTGCAAGCCAAACGAGTCTAAAGAAATTGCCAAAGTAATAGGTTATTTTGCAAGTTGCGATGAATGTCACCGTATTGCATCTAATATACTGTTTTTATAAACAGCTATCGACTTTGAGCCACAGGATGTGACTATGCCCGCGAAGTATATTGCCCCCTCGGATTTAAAAACGATACTCCATTCAAAACGCGCCAACATTTACTATCTGGAAAAGTGTCGTGTGCAGGTTAATGGGGGGAGAGTGGAGTATGTTACCAGTGAGGGGCATGAGTCATTCTACTGGAATATCCCAATAGCAAATACAACGGCCATTATGCTAGGAATGGGAACCTCTGTTAGCCAGGCAGCGATGCGTGAGTTCGCCCGCGCGGGTGTGATGGTAGGTTTTTGTGGTACGGATGGCACACCTTTATATGCCGCCAATGAAGTCGATATCGACGTTTCCTGGCTATCGCCACAAAGTGAATATCGACCAACGGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //