Array 1 3041-2233 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CTKE01000006.1 Yersinia rohdei strain 68/02, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
      3040	    28	 100.0	    32	............................	AATTATCGCCGAGTTTGGCCTCTCCGCTAGTG	
      2980	    28	 100.0	    32	............................	ATTATAAGGGAGTTGATTAAAAAGCATGGCAT	
      2920	    28	 100.0	    32	............................	GATAGGCAATGGCCGTGATAGCTCGCAGGAAA	
      2860	    28	 100.0	    32	............................	ATAATCAGCGCACGACGCTCGACCTCGCCCAA	
      2800	    28	 100.0	    32	............................	TGATGAGTTGCGCGAGCAATACGTCACGGCGG	
      2740	    28	 100.0	    32	............................	TTAGCAGCAATACTGTCCGTGGCCTTTATTGC	
      2680	    28	 100.0	    32	............................	ACCATATCCACTCGCTCATCAAAGTCAGAACT	
      2620	    28	 100.0	    32	............................	TGCCAACCCGCTGACGGCGAGTGATAACTTCA	
      2560	    28	 100.0	    32	............................	AACAGCAAAGATAAATTGCTGCCAGGGTTCCA	
      2500	    28	 100.0	    32	............................	TCTCTTAGAACGTGTACCCGTTTATATCAATA	
      2440	    28	 100.0	    32	............................	TATTTAGTTGGAGGGGTTTTTTACTGCGAGCA	
      2380	    28	 100.0	    32	............................	TTGCTAAAAAAGGCGATGCAGCATGAGGGCGC	
      2320	    28	 100.0	    32	............................	TGGAGAAAGAGCGCAAAGAGCGTGAGAAAGCA	
      2260	    28	  96.4	     0	.........T..................	|                               	
==========	======	======	======	============================	================================	==================
        14	    28	  99.7	    32	GTTCGCTGCCGTGCAGGCAGCTTAGAAA	                                	       

# Left flank :   GCGCAAGACATCGATAATTTGATGCAGCAAAACTGGTTACAAGGTATGCGTGACTACGTTCGATGCAGTGCGGTATTGCCGGTGCCTGAGGCAGTACAATACCGAACGGTGAGGCGAGTACAGGCAAAAAGCGCCCATAACAAGCGGCAGAGATCGATTGCTAAAGGGTGGCTAACTGAACAGCAGGCGTTTGAACAAATACCCGACACCCAACAGAAATCTCTCAGGTTGCCTTTTATTCAACTGCGTAGCCTTTCGAACGGCAATACGATGAGAATTTATATTCAGCATGGCGAATTGCAGGAACAAGCTCAGTTGGGAAGTTTCTCTGCCTATGGTCTAAGTAGCAGTACCACCATACCCTGGTTTTAACCCTTTTTTTCGGCTATTGCTAACTGATTGTTTTGTAATGGTGTAATGAGAGGGTGAGAAAAAAGGGTTTCTCAGTCAATATCCTGATTTATGTTTAATAAACAGGGTGATGGCATATTTTTATTACC
# Right flank :  CTTTGCCGCTGTGTCACTCAGGACCTCGGTTGACATTTGATCTTATATACCCAATTTAGTTTTTAGCACTTCGTAAGGTGTTTTTCCACCATGTGCTGAATGGGGGCGATGACAGTTATAAAATGCCTCCCATTCCGCTAGTTTTTCATGAAGGTCGACATCATCCGTATAATCGATAAGCTGATAAAATTCCTGTTTATCTGTCAGATGAGAACGTTCTACTTTTCCATTTAATCTCGGTGTCGCTGGTTTGATATAAACATGCTCCATCCCTAACTCATGCACATGCCAATTAAATTTCGCCTGGAACTCATGGCCATTGTCTGTCCTGATGGTTTTTAGTCGGAAAGGAAATTTATTCACAACGTAATCAATAAAATTAATCGCATTGGCTTGATTATGCCGCTCATAAATTTTTAAGGCTCGTATCCGGGTCGCATCATCAATTGCGGTATATTGAAAACACTTAATCCGTTGACCATTAGGACTATTAAAAAAAA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCGCTGCCGTGCAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [6,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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