Array 1 151219-151786 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATKC01000049.1 Fusobacterium nucleatum subsp. nucleatum ChDC F316 Contig049, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================================= ================== 151219 30 76.7 109 ..AA....G...A.T...A..........G AAATAAAAAATTGTAAGAAATTAAAGTTTTTTATTTTTTAGTAAAAAAACTTACATTGACAAAAAGATATAAAAAAAGTATTATGTAGGAGTAGTTTTTTTAGCTAGCT CA [151240] 151360 30 100.0 35 .............................. TAAAAAAAATTCAAAATGATGTATATAAATTAAAA 151425 30 100.0 7 .............................. AGCAAAT Deletion [151462] 151424 30 100.0 36 .............................. TAGCAAATGATGAAAAAGTTATATAATCCAGATTTG 151491 30 100.0 36 .............................. CAAGGTTACACATTTAGCCGTGATTGTGCTTGTGTT 151557 30 100.0 37 .............................. GAGCAAAGGAACTTGTTAATCAAATTAAAATTTGATT 151624 30 100.0 36 .............................. TAAAGTAAATTTACAATCTTCATCTATACATTTATA 151690 30 100.0 37 .............................. GATGATTACATAACTCTTTCAACTTCTGAAATCTTTA 151757 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================================================================================= ================== 9 30 97.4 42 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : AACTTATTGTCCAAGAATTTGAAGATAGATTAAAACAAATAATAACTCATAAGGACTTAAATAGAAAAATATCTTATCAATATTTAGTGAGGCTAGAATGTTATAAACTTATTAAACATTTATTAGGTGAAAAGAAATATAAATCTTTTCAAATGTGGTGGTGATAAAATGTATGTAGTTGTAGTGTATGATATTTCATTGGATGAAAAAGGTAGTCGGAATTGGAGAAAAATTTTTGGAATTTGTAAAAGATATCTTCACCATATTCAAAATTCTGTCTTTGAAGGAGAATTATCAGAAGTTGATATTCAAAGATTAAAATATGAAGTTTCAAAATATATTAGAGATGATTTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAAGAAATGCTAGGTTTACAAGAAGATAAAACTGATAATTTCTTATAAAATTTATTGTCTACCTCTGATAATGTAAAATTACTGAAAGATTGACAAAAGTT # Right flank : CAAGGCATAAAAGAAGAATTAAACAAGCATTTAACTTATTTATGTATT # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.34, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 36-668 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATKC01000050.1 Fusobacterium nucleatum subsp. nucleatum ChDC F316 Contig050, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 36 30 100.0 37 .............................. TACATCATTTTTATATGAACCTTTTCTATATTTTTCT 103 30 100.0 36 .............................. GGTGTTAATAACAAAAATACTCAAAATAATGTAGCA 169 30 100.0 38 .............................. TATCTCTTTTCACTAATAATTGCTCTTTTATATTTTGA 237 30 100.0 38 .............................. GTGAGTGTGAATAATTGGACTTATGAAAGATTTATAAA 305 30 100.0 37 .............................. CAAGGCATAAAAGAAGAATTAAACAAGCATTTAACTT 372 30 100.0 37 .............................. CAAGGCATAAAAGAAGAATTAAACAAGCATTTAACTT 439 30 100.0 37 .............................. CAAGGCATAAAAGAAGAATTAAACAAGCATTTAACTT 506 30 100.0 36 .............................. AAAGATGACTTTATAGATTTATTAAAATCTGAAAGA 572 30 100.0 37 .............................. AAAGCAGCAAAGATAACAACAGAATCTCGTCCTGTTT 639 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 99.7 37 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : TTCAAAAATTAAGTATTTTAGGTAGCTTGTTCCAAA # Right flank : ATGTACTGACCCCAAAAAGTCGGACAAATTTAATTTAACTTACTAATAAGGATTGACTTCTGTAAGAAGCAGGAGTTAATCCTTTTAATTTTTCTGTTACTTTTTCTTCCTCTATAAATCCTATGCTTATCTGAGTTCCCTCTATATCACTTTCTTTTTTTCTATTCCATATTTTTTCAAGTCAATTTTTGCAATGCAACTATTTTCAAAATTTTTAAATTTTGTATATCCTATTGAATTTCCTGTAAGACAATTATAGGTTTTCTAAATCTGAAATATCTTTCTTTAATTCATCAGGAATTTTAGATGCATCTGTTACTCTATAGATTGCTTTATATTTTTTCTTTTTTAAATTACAATTTCTACAAGCAATAATTAAAACATTTCCAATGTAATTTCCTTTTTCCTCAGGAGTAGTTCTTAGTATAGAAGATGGAGCATAATTACTTGTATTTTCCTCTTTTTTTATTATTCTAAAAATGATTGATTTTTTGTTTCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //