Array 1 3294-1730 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRWD01000054.1 Flavobacterium psychrophilum strain THC 02-90 contig63, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 3293 46 84.8 30 TCAAAT....T................................... ATGTGCTTTCTTCATAATCAGGATATTATG A [3278] 3216 46 100.0 30 .............................................. ATTAATGCACTAATTATCGAAGGTAGCACT 3140 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 3064 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 2988 46 100.0 30 .............................................. AAATATAATATCTAAAAACTGAAAGAGAAT 2912 46 100.0 30 .............................................. ATTTAATGTAATTATACCCTAATCATCTAT 2836 46 100.0 30 .............................................. TATATCCATATTTCAATACACATTGTCACG 2760 46 100.0 29 .............................................. CGTTTTCGCAAGTGAAATCAAAGTACTAT 2685 46 100.0 30 .............................................. TTTTAAAAAATGCTTAACTACGATTACTTA 2609 46 100.0 30 .............................................. TCCACTAAGCTAAATGTCGTATATCAAAGT 2533 46 100.0 30 .............................................. AGCTAATACCTTGTGTCGTGTTACGTGTTC 2457 46 100.0 30 .............................................. AAAATATTTAGCAACATAGATGATTGTTTT 2381 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 2306 46 100.0 30 .............................................. TAATAAGTTGCTCCTTTCAGTTTATTCCGT 2230 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGATACATT 2154 46 100.0 29 .............................................. AAAACTAAATACATACAGCGTACGCATTC 2079 46 100.0 30 .............................................. TTTCTCTTCTTTAGTCTTTTATAAGTCTTT 2003 46 100.0 29 .............................................. AGTAATAGATGCCCAGATTGTATGCCGTA 1928 46 100.0 30 .............................................. TGATCATCTGATGAGAATTGCTGTTCAATA 1852 46 100.0 31 .............................................. AAGCATAATAGAATAAAAGAAATACACAGCA 1775 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 21 46 99.3 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : CAAATTTGCGTGGTACATCAAATTAGAAACGCTTGTAGATATGTGGTATGGAAAGATAAAAAACAATTTACATCCGATATGAAACTTGTTTATACCGCACCAACAAAACAAGCTGCCGCATTAGCTTTGGAAGATTTTGCTCAAAAATGGGAATCCAAATATGGTTATGCCATCAAATCCTGGAGAGAAAACTGGGACGAATTAACCGTGTTTTTCGACTTCCCGCTAGAAATTCGAAAAATAATCTATACTACAAATTTAATAGAAAATTTAAATGGAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCA # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTAATTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //