Array 1 35381-31338 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICM01000020.1 Halanaerobium congolense strain MSL28 Ga0213559_120, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 35380 37 100.0 35 ..................................... TGGTTCATAAATCACTTTAAGCTGGCCCGGTCGAT 35308 37 100.0 34 ..................................... TTTACCGAAATGACCTTGCATTTCCTCAACCCAG 35237 37 100.0 34 ..................................... TAGTCTATCAACCTTATTATAGTCTATTGATCCA 35166 37 100.0 34 ..................................... TATCATAATCTGTCGATTTTTGCTGATTAACTGG 35095 37 100.0 33 ..................................... TAAAAGTTTCTACAATAAAATCTTTTTTACTTA 35025 37 100.0 35 ..................................... AGCCTTTTTTATAGCGGCCGAATAACTAGGCTTAT 34953 37 100.0 34 ..................................... AGGATAGAGATAACCTGAACAGGTTTTTTTCTGA 34882 37 100.0 34 ..................................... CTTCTATATTCTAGCTTATAGACTGATTATATTA 34811 37 97.3 35 .......................A............. GCCCAGGTAGCATTAGTTGCTGCTCCCAAATTGAT 34739 37 100.0 34 ..................................... TAGCTTATCCACCTTATTATGGTCTATTGATCCA 34668 37 100.0 34 ..................................... TATAATTGCAAGATGAAAAAAACAAATTTCAAGG 34597 37 100.0 33 ..................................... TGCTGTTGCTGGGTCGTTGCTTTCTTGCCATTC 34527 37 100.0 35 ..................................... TTTAACATCATTTAAAGATTTATCAATAATTTTTC 34455 37 100.0 36 ..................................... TCAGCCTTTTTTGTTACTGCCGAATAACTGGCCTTA 34382 37 100.0 35 ..................................... TATATGATTTATCTTTGAAAGAGAAAATCAAAGCA 34310 37 100.0 36 ..................................... AGCGTCTGTCTTTCTAACAAAGCCACCCACTCCTAT 34237 37 100.0 35 ..................................... AACTTGGTACTTGCTCATTCCATAATCATGTCCAA 34165 37 100.0 34 ..................................... TATTAAGCATTAATTTTCACTCCTCCAATAACCA 34094 37 100.0 34 ..................................... ATTTTATTTTGCCCCTTTCCTTACTCTCTATGTA 34023 37 100.0 36 ..................................... TGGAGTATATACCAAAATTATTCACCTCCCAGATAA 33950 37 100.0 34 ..................................... ATGCCAGAAAAATATGACCTCCTTTACCGTCGTT 33879 37 100.0 34 ..................................... ATACTGATCAGGATTGGAGAGATTGGGCTAACAA 33808 37 100.0 35 ..................................... AACTTCTTCCTTAACTTCACCGGCAGACTGCTTTT 33736 37 100.0 35 ..................................... CTGCCTTTTATCTTTTTTACCATACTTTTTGATCA 33664 37 100.0 35 ..................................... TATAATACCTTCTTTTTCTAACACAAGTTTATATA 33592 37 100.0 35 ..................................... TTGTTTACGCTTCTCAGCTGTCTCGTCGATAATAA 33520 37 100.0 35 ..................................... ATGAGTTAATACCTCAAAATCAAACGCTGATATAT 33448 37 100.0 34 ..................................... AGAGAAACTGATATTGAAAGTTATAATGCAAGAG 33377 37 100.0 35 ..................................... TAATATACTACCTTTGTTGTTAATAATGTCATTAG 33305 37 100.0 35 ..................................... CACCAAATTATGACGGTGAAAAATGGAAGAATGAA 33233 37 100.0 35 ..................................... TGTTCCTGCTGCTGCTGCATTTCATTGAATTTTTG 33161 37 100.0 34 ..................................... AACAATTGCTTTTTTCTTTTCCGGACCATGTTTT 33090 37 100.0 34 ..................................... ACCATAGCCCTTTTCGGCTAAACTCTTTTCTTGA 33019 37 100.0 35 ..................................... ATAACTTTAGTTATTTATCTTATAGAAAGCGGGGT 32947 37 100.0 35 ..................................... AGAGTATATGTCAGTCTCAACTTTCAAATCATTTC 32875 37 100.0 33 ..................................... AACACAACCTGCTTTTGGAATAATTTTAATGGT 32805 37 100.0 34 ..................................... ACCTTCAATAATCACAGTGTGATCAGCTAATTTT 32734 37 100.0 34 ..................................... CATCAATTAGGACTATTTCAGAGCGCAGAAGAAA 32663 37 100.0 35 ..................................... AAAAGCATGGCCAGCTATTCAGATGAGATTGTTGA 32591 37 100.0 34 ..................................... ATCGTCTAATTCCTCCAGTTGCTGTACCTTCTTA 32520 37 100.0 34 ..................................... TAATGTATAATTCCAATTATTTTTTAATTTTTTT 32449 37 100.0 34 ..................................... TGATAATCTTTGTGCTATTTGAGCATAACTCAAA 32378 37 100.0 34 ..................................... AGTTCTGGCCATTAGAACTTCATGACCATTTTGT 32307 37 100.0 34 ..................................... ATTTCCAGCACTTTGTTGAAAAATTCAGCTGCGA 32236 37 100.0 34 ..................................... ATTTCTAAAGTTAATAAAATAGAAACTAAAGGGA 32165 37 100.0 35 ..................................... TTCATCAACCGAAATTCCTTCAAGTGGCATTTCGT 32093 37 100.0 35 ..................................... ACAAGTGGCTGCAGGAAAATAATTATAAAATTGTG 32021 37 100.0 35 ..................................... ACCTCCTTGGCTTACCAACCATTAAATTCACCAAT 31949 37 100.0 35 ..................................... AAGCCAATCTATTGCATCATCAGCACCAAAAGCTA 31877 37 100.0 34 ..................................... AGTTGATTTAGCGACCATATCTCCGTTAAGTCTT 31806 37 100.0 36 ..................................... ATGATCTGCAAAAGCTTCTTTTAAACCGGTAATCTG 31733 37 100.0 33 ..................................... AAAATTCATTGACTTAGCTTCTTTCTTTTTTGG 31663 37 100.0 36 ..................................... AATCCTTATTTTAGTGGATCAGTCACTGGAACTTAT 31590 37 97.3 34 ..........T.......................... AGGTGAAATAGTTCATGTTCATCATGCAGATGCA 31519 37 100.0 36 ..................................... GGTGTAAACATCATCCTGATATATAGCATCATTCTG 31446 37 100.0 35 ..................................... TACTCACAGAATAACTGATGTCAGTCCTGATATAG 31374 37 97.3 0 ..........T.......................... | ========== ====== ====== ====== ===================================== ==================================== ================== 57 37 99.9 35 ATTGCAGTCCCCTTTGTTGGGGGCTGAGAATTGAAAC # Left flank : TTATTTATCAGTAAAGGTGTGATAAAATTGATGTATGTTCTGGCATACGATATTTCAACTGAAAATGCTAACGGCAGAAAAAGGTTGAGAAAAGTTGCTGAAACCTGTGAAAATTATGGACAGAGAGTTCAGAAATCAGTTTTTGAGTTTCAATTAGATGATAAAAAATTTTTAATGATGAGAAATGAAGTATTGGAGTTAATGAACAAGAAAAAAGATAATATTAGGATCTATAAAATAATTGCTCCAAAAGATAATTATGTAGAAGAACATGGGAACTTTAAGTCTGTAGATTATGATAATGACACACTGTTAATTTAATTTGCGAAAGAGGAATGTTTGTTAAATTGCTATTTCTTTCGCAAATTATTATAAATACTAATCTAAGAGGCATTTAAAGGAGATGAAGTAAAATGATTTTATTCTTTGTGGAGGTGATAATGGATATTCGCAAAATAGGCTTTATGAATCTTGATTTAACAGGGCTAATTTAGCCTGCT # Right flank : TGAATTGTACCATCACCATTAAGAAACTCTCTTGTCTTGAATTATTCATAACAACCACGAAATAAATTATCAGTACTAATATAGCAAAATTCTATCAAAATATTATTTTCACCCAGTGGGTGAAAAAGTTTTTATTAAGATTTTTCTCTAAAAATATAGAAAAAGGAGCCTCTTTCCTTTATAATAATAGTAACGACCAAATTAAAAGGAGGGACTCCGTATGGTTACTATAACTGGAAAAAAAATAGATTTCAAGTCAAATTTAAAAATAAATTTTAATGGTAGTGATTTAACATCAAATTCCGGCATGCTGATGATGCAGATGATCTACGGTTTGATTTTTCATTTCAGACTATACTGGGAAAATAAATTTTGGCTTCTCAACCTGCTATTTCAAGATTAAACAATCAGGTCGATAAAGAAAATATGAAACAGCTGCAGCAGGCTAATGCAAATAAATTACAGCAGATGATGCTTGCCTATAACTTAAATAACTGACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGTCCCCTTTGTTGGGGGCTGAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //