Array 1 185661-182157 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIHBK010000007.1 Klebsiella pneumoniae strain K6310 NODE_7_length_256581_cov_95.049079, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 185660 29 100.0 32 ............................. GGGTTGCTGAAAATCTCGCATCACAGGCAAGC 185599 29 100.0 32 ............................. AACGTAACCTGATTCCAGTCTGCATTATAAAT 185538 29 100.0 32 ............................. GCCCGAACGCCGATACGAATTTATCCCGAGGA 185477 29 100.0 32 ............................. CCTAGCAGCTCTACGGCGTCTTTTTTGCCGCC 185416 29 100.0 33 ............................. CGCATAGTGACAATTGAGCACATTAGCGGCCAG 185354 29 100.0 32 ............................. ATAGCCGACAGTACGCCAATGCTGGTGGAGCC 185293 29 100.0 32 ............................. TTTTATGCTACTAAGAAATATATGACAAAATC 185232 29 100.0 32 ............................. GCGATTGGTGGACCAGTTTCCGCGGCGTTCCG 185171 29 100.0 32 ............................. TCAAAAAATGTTTACAGATTTAGCACCAGAAC 185110 29 100.0 32 ............................. GTTACTGACTATTCTGGTGGCACACCAAACTC 185049 29 100.0 32 ............................. TAATGCGGCGTCTCCGCATCGTTGAAAAAGTC 184988 29 100.0 32 ............................. CAGCCATTCAGCAGATCCCCACTCTCCGAAAG 184927 29 100.0 32 ............................. CCGATCGGCTTCCGTGCGCGCGGGCGGGATAT 184866 29 100.0 32 ............................. CGTTCCGGCGTGTAGGGCGGGTCGAGTTCCTT 184805 29 100.0 32 ............................. GGTTCTGGCTGATTTGACCTTCGACATTACAC 184744 29 100.0 32 ............................. TCAGGGATTTGCTAGGCTCTAATCCCGTGCGG 184683 29 100.0 32 ............................. CCTGCTTTTTTCATTTTTCGGTCAGGTTAAAT 184622 29 100.0 32 ............................. TTCGCCGGCGCATCGCCCAGGTGAGGGCGCGG 184561 29 100.0 32 ............................. ATAATCCCGGTTCAGTGAATAACGGGGATTTT 184500 29 96.6 32 C............................ GCTACCAGTTGCCCTTTCGTCGCACCGCTCAG 184439 29 100.0 32 ............................. GCGGACTTTACTGGAGATATACCGCGCCAGTA 184378 29 100.0 32 ............................. ACGGGTCTGACTCCAGAATCGCCGTAAATATC 184317 29 100.0 32 ............................. CAACCCACGGGGATCCGAAATCGCCTGCGGTG 184256 29 100.0 32 ............................. GCAGGCCTTGCATGAACTGATGACAGGCAAGC 184195 29 100.0 32 ............................. CGTGAGTTTATGGTTTCGGTTAGGGGAAATAA 184134 29 100.0 32 ............................. ACATTTTGGTGATCCGCATATGCGTTTCCCGG 184073 29 100.0 32 ............................. GCAACGTTCTCAGTCAACGATCGGTTGCTGCG 184012 29 100.0 32 ............................. TCCTGGGGTATCGTCGATGTACAGCATGTCGA 183951 29 100.0 32 ............................. ACCCATGGCATTGGCCACATTGGTCGTCCCCT 183890 29 100.0 32 ............................. TACGCTTTAAAAAATGGGCTGAGGGTTGTAGC 183829 29 100.0 32 ............................. GTCATTCAGTGCTACAACCCGTCCAGTCTGTC 183768 29 100.0 32 ............................. CAATTCCTGCCGGTGATTCCGCGGTCGGCAAC 183707 29 100.0 32 ............................. CCCGACAAAAGTCATTGAGCTTGTAAAGGCTG 183646 29 100.0 32 ............................. GCGTGCAGTTCTATAAGGATGGCGACGCGTTC 183585 29 100.0 32 ............................. AAAATGTGCGAGCTGTGGGATGACCTGAATGA 183524 29 100.0 32 ............................. AGACGCGGCAGAACCTGATCCCTCTCAGCCGG 183463 29 100.0 32 ............................. CTTTGCCCGGTGATAACAAAATCAGCAACTGC 183402 29 100.0 32 ............................. ATTACGCAGAGCAAATGGGATTCACTGTTACT 183341 29 100.0 32 ............................. TCAGGCGACCAGGTCGTCATGGACGTTTATAT 183280 29 100.0 32 ............................. GTACTGGAACCCCTTGGAACTGCGCAAAATGG 183219 29 100.0 32 ............................. CCTCCGGATTCATGTCCCATCTGGGCAATGAA 183158 29 100.0 32 ............................. GAGATACCGTTTTAATTCAATACGGCGGCGGC 183097 29 100.0 32 ............................. GGCAAAAAACGGATCCGCCACGTGGAGTGGGA 183036 29 100.0 32 ............................. CACCAGGCCGCCGTCTTTGATGACGCGCATGT 182975 29 100.0 32 ............................. AGGATCGGGATTTTCCCGGCGTTCCATCGCTT 182914 29 100.0 32 ............................. CATCGGAGGTGATAAATGCAGACAATTATCCA 182853 29 100.0 32 ............................. TTCTGGCAGGTCGACGACGACAACAATCAGGT 182792 29 100.0 32 ............................. CGGCTGATCTGCGGCCGCCTGGATGTGTCCAA 182731 29 100.0 32 ............................. CGCACTTTCACGATGATCATGCGTGAGGCGGT 182670 29 100.0 32 ............................. CCAGAAGAGGAGGCAACGCTGGATCTTATAGC 182609 29 100.0 32 ............................. TGGTCAGGGCTGATTGCAATGGACCGGGCAAA 182548 29 100.0 32 ............................. CCGAGCCTGAGTTTTGTGAACGGCCCAGCCAG 182487 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 182426 29 96.6 32 ..........A.................. ACGGTAATTATTTATGCCCTGGATAATATTGG 182365 29 96.6 32 .......T..................... TCTGACTGTCGAGGCATTATGTGCCCTCCGAT 182304 29 96.6 32 A............................ ACGGTCCGACAGAACGGCGCTGGAATCTCTCG 182243 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 182185 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 58 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCGCCACCTGAAGGCGCACATCCTGTAGCTATCCCATTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTTTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //