Array 1 5421031-5423475 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036317.1 Gimesia panareensis strain Pan153 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 5421031 32 100.0 34 ................................ GTCCTGTATGCTGCCGGGGTTATTGCTGCTCTGG 5421097 32 100.0 35 ................................ TCGCTGCTGCGTGTTTTTATTAAACCAGCTGCGAT 5421164 32 100.0 33 ................................ TAGTTCTGCCCCGGGTTCAATCTTTTTCGGATC 5421229 32 100.0 33 ................................ AACCGCAGGGTTTCACCGACAGCATCCGCCGAA 5421294 32 100.0 33 ................................ CCGATCTATCGTCCCGTCAAAGTGAGAGATCAA 5421359 32 100.0 33 ................................ CCCCGAATCGATCAAGAAATACTGGAGGCATCT 5421424 32 100.0 33 ................................ AGATACTGGGGATTTGGCTCCATGCAGAACGTG 5421489 32 100.0 33 ................................ ACGAAATGCCATATACAGGAACCTCCTTTTTGC 5421554 32 100.0 35 ................................ CAGCGGAGGGGCGGAACTGGCTCCGGAATCGGCGC 5421621 32 100.0 35 ................................ ATACATCCCCAAAGGCGGGGGAGCCAATCTCCCCC 5421688 32 100.0 34 ................................ AAAACAGACAGGGCAAACAGCTCTCAGCTGCCGC 5421754 32 100.0 34 ................................ CCTTCCACGTTCCGGATGATGCGTTCGCGTGTCC 5421820 32 100.0 35 ................................ TTAACCGCATCCCAGATCATATAGCCCGCTGCTGG 5421887 32 100.0 34 ................................ CTATGCCACCGAGGAGCACGGCTGGGAAGAATCG 5421953 32 100.0 33 ................................ CAGGTCTCTTCAGAATGTTGCCGTCGATACTCG 5422018 32 100.0 34 ................................ CTCCTGTTCGACCGAGAGTGCTTTCCAGAGCCGA 5422084 32 100.0 36 ................................ GGTGCGAAAGGGGAAGGGCTTATCCTGGGCCAGAAT 5422152 32 100.0 36 ................................ CAGTCCATGAAACCATCATTGGATACGTTGTCCTAT 5422220 32 100.0 35 ................................ ATCAGTAAATCCTTTGTGTAAAAATGCCCCGCAAT 5422287 32 100.0 37 ................................ TCATTGGCCCGCTTGATCACTGCGTCCGGTTTCCCAT 5422356 32 100.0 37 ................................ CGGAAGTGACCGTGGAAACGAACATCTCCGAGCTGAT 5422425 32 100.0 35 ................................ ATGCCTTTATACTTCCCGAAGTGGAGCACATAAAT 5422492 32 100.0 36 ................................ CGAGAAACTCCCGAAGTTCATCGCGGAACTGATTAT 5422560 32 100.0 36 ................................ ATTGAACCGGAGTGTTGACTTGATGTTCTTGATCAT 5422628 32 100.0 36 ................................ TTTGACACAGATCAACGCCGCATAGTCACCACCTAT 5422696 32 100.0 35 ................................ TGTGGATCGGTCACGTTGAACGGTAAACACTGCAT 5422763 32 100.0 37 ................................ CCGGAAACCCGCTGCGGCGTTCCCGACCAGGCCAGAT 5422832 32 100.0 34 ................................ CACTTTCCCCAGGACCTTGGTTTTGATCTTCTAT 5422898 32 100.0 38 ................................ CGGCATTATTAGCATTTCCACTTGACGCAAAACCGCAT 5422968 32 100.0 36 ................................ ACCGTGAAAACGCCAGGTGAGTGGCGTATCTCGCAT 5423036 32 100.0 37 ................................ CGTACTGCAGCGCGGCCCCCTGTGCATTGGTCCGCAT 5423105 32 100.0 38 ................................ TCGAGAACATACACCTCGTCTGTTTTGAGGCTGATAAT 5423175 32 100.0 37 ................................ ACCGACCGGGATTTTACGGGCCGCGCCGGTTTTGGAT 5423244 32 100.0 35 ................................ TCCAACACCATGACCCGCATCCAGAGAGCGGCCGG 5423311 32 100.0 34 ................................ TCGACGATCTCGTCAATCCTCCGTTTCCAGTCAG 5423377 32 100.0 35 ................................ ACCTCGGCAGTCGTTGGTAATGCATCCAACTGAGT 5423444 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 37 32 100.0 35 ATCGCCCCTCACGTAGGGGCGCGGATTGAAAC # Left flank : TCAATTCGTGTATGTCCTCGTAACTTACGACATTTCCACAGCTGATCCGAAAGGCCAGAAACGGTTACGTCGTATGGCAAAGGCTTGTGAGAATATCGGTCAGCGTGTTCAGAACTCAGTATTTGAGATTAAAGCTGATGCGGGGCAATGGACGCTTTACAAAGCCATTCTTTTAGAGATAGCCGACCTTTCCCAGGATAGCCTACGCTTTTATAATCTGGGAAATAACTGGGAGCGAAGAGTGGAACATCATGGCACGAAAGACGGCTACAACATTGATGGTCCACTGATTATGTAATCGTTTCCAGCAACCACATTTCAAATTGCGAACCCAATGCGCGCTCATTTGAGCCAGATGTTTCGCACTTCTTCCAACTTGTTACTTTTAATGGATTTAAGTATTTTGAAGTACAGTGAACTCGTAAATCAGTATGGAAAAGCACCTGCTTCGCGGATCAGTTCTTCGAGACAATTGCAGCATATTGGTTTACAGCATCGCT # Right flank : CAGATTTGAGATGGCGGTTTGCGTTGTCGAGTGCTGATCGCCCCTCACGGACCTGGGATGGCTTTTCAATCAGTACTTGACCTTTGAGTTCTGTCCTCTATGATTTCCCTGTCGGTGGGAATTCCCACCTGATTGCATCACGAGTGGCGTTGAGGGAAATGGCCCTTTGAAATGCCCGGCAACCTGGTTTAGCCACCAAGGTGCCACAGCCTTTCCGAGAGGAAGCGATGCGGCCTGAAAAAGCAAAGAATGGCCCAGAGAATCCATATGCGGTTTCTTTCTATATGCTATTTCCTGATCGCCAGTGTTGCCCGTGATTATTCTATTTTGATTTTAAAGGAGATATGGGCAATGTTATTCAGCGGAAAACAATATCTGTACACAAAACCGGGGGAGAGAAAAGAACTGAGCTGTCCCATCTGTGGCACAAAATGTGACGTTAAACGCAACTGTTATGGACCGACCTGCTTTGCCGAGGCCGTTGGTGGTCTAGGGCATCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCCCCTCACGTAGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.40,-4.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 2 6886169-6883370 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036317.1 Gimesia panareensis strain Pan153 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 6886168 35 100.0 37 ................................... CCTGGGTGGAACCTCAGGACAGTGCCATATGTTTCCA 6886096 35 100.0 36 ................................... TTGAACGCTGGAACAACCCATTTTATTTTTAACGAA 6886025 35 100.0 39 ................................... ACTCCAACTCATTAAGGAGTAGCATCCACATTACTCGCA 6885951 35 100.0 39 ................................... CTTACCGTTTCTTGTCAAATTTCTTTCCCGTTGAAATTA 6885877 35 100.0 38 ................................... GGATCAGGTGCATGTGGTTTACAACGGGCTCGACTTCA 6885804 35 100.0 39 ................................... AAATTCGGGCTCAACAGGGCAGTGCGAAATATACCTATA 6885730 35 100.0 39 ................................... CAGTATTTGACCAGGGTTCCGACGGGATACATCTCGTTA 6885656 35 100.0 40 ................................... GAAAGGTTTTCATCGTGTCCCCTCCATGGGTTGATGTGTA 6885581 35 100.0 37 ................................... GATGATGATATAGATGATGAATTTCTTGAAGAACTTA 6885509 35 100.0 39 ................................... AACTGGCTTAAACCAAAACCAAAGCAAATTGAATATGTA 6885435 35 100.0 38 ................................... GCAATGTATCTAAAAAGCAAAGTTGATGAGGGGAAATA 6885362 35 100.0 39 ................................... GAAATTTCAGAAGTTGAGAAGAAGACGAAATTTGGTTTA 6885288 35 100.0 37 ................................... CTCGTCGATACCGATCCGGCATTCTTTGTTCTCTCTA 6885216 35 100.0 40 ................................... CGGTCACGGCGGCCGGGATGTGAACGAAATCTATTATCAG 6885141 35 100.0 36 ................................... TCAATTTCGCTTTCACAGGTCCTGCCTCGATCGCGG 6885070 35 100.0 39 ................................... AAACCAACCCCGGCCCCGATCCCGTTTGAAGATCTGGAG 6884996 35 100.0 37 ................................... AAACGGACAAGGCCAAAGGGTTCAGTTACTCCTCAGG 6884924 35 100.0 36 ................................... AATTAACGTAGGGTAAAGGAGACGGTACTGATATGG 6884853 35 100.0 38 ................................... AAAAAAACAATAAAGGAACTCAGATTATCTCCAGATTG 6884780 35 100.0 36 ................................... AGACCATCCATGAAAAAACGCATCATGGATAACGTG 6884709 35 100.0 38 ................................... CCACGGTGCCTGGGCCTACACTCCGGAAGCATTCAGAG 6884636 35 100.0 36 ................................... GACGCTGTCGCTGACGATTCGATCGGGGCCGCTGGG 6884565 35 100.0 37 ................................... CCCGCTGGGGCCGGCCAGGGCACATGGACCAAGTATG 6884493 35 100.0 35 ................................... TCGACGATATTCGGTACAGCATGGGCTTTAACGAG 6884423 35 100.0 39 ................................... CAAAAGATTTTAAAAAGTTTAATTTACAAACAAGACAAG 6884349 35 100.0 36 ................................... AGGAACAGGAGGCCGAAGCACGCCGCAAACTCAGCG 6884278 35 100.0 38 ................................... AGCGCAGGGTTGAATACGTTGCCGTCACTCGTGCCAAG 6884205 35 100.0 39 ................................... TCGTGAGTGGGTTGGTTACGGGTTTTTTGCCGACGCGGG 6884131 35 100.0 38 ................................... AGTTTGTGTGGGTAAATCTTCCGGGCGATTGGTTAACG 6884058 35 100.0 36 ................................... AACATTCAGCGGTTGTGTCATGGGATTACGCCGAGG 6883987 35 100.0 39 ................................... TTACTGAAGTACTGGAAGGTGCCACGTCGCGGCAAATCG 6883913 35 100.0 38 ................................... AGCCCGACGACAGGCAGCCCTGGCGAAGCTTACACCAG 6883840 35 100.0 38 ................................... CGCATTGAATCACGCACGAAAGTAAAGCGGTAAATAAG 6883767 35 100.0 37 ................................... AGAGACAGATCCCCAATCCAAGGGATTGATTATATTG 6883695 35 100.0 36 ................................... CCCAGAAAGGGAGAGAGATCCACACCGTACTCAGCG 6883624 35 100.0 39 ................................... AAGCGGGTTTCTGGCGAACTGAAATTCTGAAGTCACTGG 6883550 35 100.0 39 ................................... CGGCATCGATCTGCCGGATCTGACAGCTGCAGGTTGCCG 6883476 35 100.0 37 ................................... TTTGGGCGATCGTTTTGCTGATTTTTTGCCCATAAAG 6883404 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================== ================== 39 35 100.0 38 CTTCAATGGGGCCGTCCAATGTTAGGACGGAAAAC # Left flank : GGCCTAAGATTCTCTGAACTTTCACTACCTGTTAATTCAATCAACGAACTTCAACCACCTCCAGTAAATGTTTTTGTGGTTGAAAATAAAGTCAACCTGTTAACACTACCTCCAATCTCGAATTCGATTGCAATCGGAGGCTTGGGTAAGTCGATTTCATTGTTTCGCGATGTTGATTGGCTTCATCGATCCAATATTTACTACTGGGGGGATCTGGATATTGAAGGATTTGAAATACTTAGCCAATTTAGAGAGGTGTTTGAACATACTGAGAGTATGCTGATGGATTTGACAACATTTAATACGCATTCCGACTTGGCAATTGCATGGCCAAATAAACCAGGTTCTATTCCGACAATGCTTTCAAATTCAGAGCAAGAGATTTATCATTTTCTGCTTCATAAAAAACTGCGTCTCGAGCAAGAGAGGATTCCTCAAGAAGAAATTGTAGATTTTATCGGTAAACTTGCTTTAATTATGTGAATGACCAGTCAAACGGG # Right flank : CGCCCGGCTTCCAACTTATTGTCAGAACACGGGTTATAAGGTGAATTTCGCGGGGTCGTGAAATTTGCATGGGATTGGCCATTCATTTTACGATGATAAATCGTTACCTTTTGCCAAAGAACAAGTTATGACTGCGAGGACTGCCGGGGGTTTTCGGGGCACTCGACTCCTCGCGACTACAAAATTATAGCAGATCGCTCTTGAGAAGTCACCTTTGAATCACCCCAGAATTCGATGCAATGATCGCCGCGTCCTTCTATCGGTCCCAGGTTGACGATCATGACGCGATCCTCACTGTGATTGAGAAGAGGCCAGAGCAATTCTTTTAATGAGTGCAATTCCATTTCGGTGAGTTCGGCCTTGAACACCGAATATTGAACCGCATCTCCATGACCGCACATGATCGGATAGATCTTTCGATAGCGTTTTGGAGAACAAATATCGTAAGAGATAAGGTATACGCTGCGCATTGTAATGATCCTGTATCGTTTATTCCATTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAATGGGGCCGTCCAATGTTAGGACGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-10.20,-10.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //