Array 1 43-211 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZZM01000085.1 Neisseria meningitidis strain Neisseria meningitidis isolate R265, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 43 29 96.6 39 .............T............... CCTTGGGATAACAGCAATATTCAAAGGTTATAAAAGACC 111 29 96.6 43 .........................T... ACGTAAAATCTAAAGAAACCGTGTTGTAACGGCAGACCGATGC 183 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =========================================== ================== 3 29 97.7 42 CGTCATTCCCGCGCAGGCGGGAATCCAGA # Left flank : TTCGTGGGAATGACGCGGTGCAGGTTTCCGTGCGGATGGATTC # Right flank : ACTGTCGGGCATCTGCAGCGGTTTGCTAAAAAACGCTTTACCGTGATCAGTGTGCAAAGTTAAAATGGGGAGGTAAGCTTTTCAACCAGCAATTCGGCGGGCGCGGAATCGGGCGGTTTACCGAACCCCGGCGTTCGCGGCGCGCCGCCCCGTCCCGTGAAGGCAAACTCAAGGAATAAAAGATGAATAAAACTTGGAAACGGCAGGTTTTCCGCCATACCGCGCTTTATACCGCCATATTGATGTTTTCCCATACCGGCGGGGGGGGGGGGCAGGCGCAAGCGCAAACGCAAACGCATAAATACGCTATTGTAATGAACGCGCAAAATCTGCCCGAGGTAAAGTGGGGGAATCAATATCAGTCATTGACGCACAAAAGCAATGAACGCGAAGTTATCCATACGAGTGGTTTTAGTTTGGTAAAAAAGCACATTAGTTTCTCATTCAATAATACCGATGAAGTTGTTGCTGAAAAAAAAGATGCTGTCGTTTTCGGCGCG # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCATTCCCGCGCAGGCGGGAATCCAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.60,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA //