Array 1 92550-90014 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZML01000005.1 Helicobacter muridarum isolate 216_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 92549 36 100.0 30 .................................... TCTCCTCCCTCTACTACAATGCCCAATGAG 92483 36 100.0 30 .................................... AAAACCAAATAATGTTACAAATCCCTACGA 92417 36 100.0 30 .................................... TTAATCCTGCGATAGAGTTCAAAAAAGGGG 92351 36 100.0 31 .................................... TAACAATTTGATTTTATCAGCTAATAAAGAT 92284 36 100.0 30 .................................... GATTGAACGCTATAGTTATCACTAAACCAA 92218 36 100.0 30 .................................... TTTCCATCTAATTTTAATGCTGCGCTTAGT 92152 36 100.0 30 .................................... AGACTAGAAACCTTAGGAGCTGTAGAGATA 92086 36 100.0 30 .................................... TTAGGGATTAATGAAGCCGAAAAGGCACTA 92020 36 100.0 30 .................................... AGACTAGAAACCTTAGGAGCTGTAGAGATA 91954 36 100.0 29 .................................... AATATTACATATTCGAGTCGCGGTTCTGT 91889 36 100.0 30 .................................... AGACTAGAAACCTTAGGAGCTGTAGAGATA 91823 36 100.0 30 .................................... TTAGGGATTAATGAAGCCGAAAAGGCACTA 91757 36 100.0 30 .................................... TGATGAATTCGACAAACTATCGGATGCATT 91691 36 100.0 30 .................................... CATCAAATAGTGCTGCTAAAGATGAATATG 91625 36 100.0 30 .................................... TCTACAGCATCGCCTACTAAATGACGAGAT 91559 36 100.0 30 .................................... TCTTGATTGACGCGTAGCATTTGTTTTAAT 91493 36 100.0 30 .................................... ATCTAGTTTTCTTTTTTACGCAGAATGCAG 91427 36 100.0 29 .................................... TTTACCTGCCATAAGATTTATGGATTCTG 91362 36 100.0 30 .................................... TTAGGGATTAATGAAGCCGAAAAGGCACTA 91296 36 100.0 29 .................................... TATACTCACCGACAGTATAAGAAAGAGTC 91231 36 100.0 31 .................................... TATTATTTCGATGACTTCATTGACTACGAGT 91164 36 100.0 30 .................................... AAATTTAAACGCAGATTTTGTTTTGAATTT 91098 36 100.0 29 .................................... ACCAACAGGAAGTAATAAGTTCCCTATGC 91033 36 100.0 30 .................................... AATTCCGCGCTTTTTAGCTTCTGCTTCCAA 90967 36 100.0 30 .................................... TGCGAATTAATGAAGTCTTACAAACTGCTG 90901 36 100.0 29 .................................... GATCCGAAATAACTAAACCCGTGACTCCA 90836 36 100.0 30 .................................... TATGAAAGAATATAGTAATGTTGGTATGCA 90770 36 100.0 30 .................................... TGTTCAAAGGTTTCAGGTATGTGGGAGTCT 90704 36 100.0 29 .................................... TACGCAAAGAACAGTATTATTATGTGGAG 90639 36 100.0 30 .................................... TATCGTTTGCAGCTCCCCGAATATCTCGGT 90573 36 100.0 30 .................................... AAATTATTCCATATCATGTTGTAAGCACGG 90507 36 100.0 30 .................................... AATCCAATCGCAAACCAAGGAATATGAAGT 90441 36 100.0 29 .................................... TACGCAAAGAACAGTATTATTATGTGGAG 90376 36 100.0 30 .................................... TAAGAAGCGTAAGATGGAGACGAGACGCGA 90310 36 100.0 30 .................................... TGGCTCTTTACGGGGGAGACCACATTATCA 90244 36 100.0 29 .................................... CACCGCCGCCGATAAGTGCGCTTGTGATG 90179 36 100.0 29 .................................... TTCTCTTTATACCCTGCGTATACATAGTT 90114 36 100.0 29 .................................... TACTATATCTGCGGCGAATATGGTTCACT 90049 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 39 36 100.0 30 GTTTTAGCCACTTATTAAATCATTCTATGCTAAAAT # Left flank : ATAGTCAAAACCCCAATGATGTTTAAAATTGCTCAAGATGTAGCAAACGCGGCAGGAAAACCTTTTGAGTGGGGAATGGAGCAATATGCAAAACATATTACATTAAAGCGACTAAGTGAACCTGAAGATGTAGCAAACGTAGTAGCATTTCTAGCTAGTCCAGATTCAGATTATATTACAGGTCAAGCGATAGTAGTTGATGGAGGTATGTATTTCAATTAAGAAATTGATAAATTTATACTCTTAGTAGTAGATGATTAGGATAACGGATTTTTCTTTAAAATCTTGATATAGAAATTACATAAAACTGTTATAAGGTTGTTGCTAGCTTTTTACTAGCAATGGATTTATTAAGCTTCAAATAAAAACTCTTAATTTATTAAGAAATAAACTTAGCATCTTAGTTATGAAGAAGCTAAAAATGAATTAGTTACATTAACCTGATGATTATAATAAAGTTTTAAGATAATTAATTTAGATTAAATATATTAAAGTTAGCT # Right flank : ACACTACCTTGAAACTGCGTATTTTAGGATATTTGATAAGTTTTAATAACACTAAATACTATAAAATATTTAGTGTTATTGATAAAATTTGGGATATAATTCAAAAATGGTTTAATAAGTGGCTAAAATAAGGGAGTTCAGGATCTCCCGCAGGGTTACAATCCCTAACAAAATCCTATTTTTACTTTAAGCTTAAATATTGGTTTATATCATGCTAAGAGTAAATTCTACATAAAAATCATAATATCAATATTTTTTACTTTATTTAAGTCACGTTGATATATCTGCCTTTAATATATTTCTTAATCTATACAAAGATTCAAAAATATACGTAATTAATCACAAGTCATATTAAAAAAGCGTAAGCTCCTTTGGCTTATTTGCCTGTTCATTATTGCTTATCTTACCAAGCAAAAGTCTCATGTTATCAAATTGCTTCTCTGTGAGTATTAATGCCCTTACATGCCCTCTTGGCGGCAAGAATAAACTAACTCTATCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCCACTTATTAAATCATTCTATGCTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //