Array 1 9529-8349 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJHGT010000025.1 Klebsiella pneumoniae strain 15KE 15ke_contig_25, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      9528	    29	 100.0	    32	.............................	TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA	
      9467	    29	 100.0	    32	.............................	TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
      9406	    29	  93.1	    32	............CA...............	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
      9345	    29	  93.1	    32	............CA...............	GCACCCTCACGTATACCTTTTGCACAGTGTTA	
      9284	    29	  89.7	    32	............CA..............C	CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG	
      9223	    29	 100.0	    32	.............................	TTACCAATGGGGAAAAATCTTCATTTGTAAAT	
      9162	    29	  93.1	    25	............CA...............	AACATCAGTGGAAATCCACTGCGGC       	Deletion [9109]
      9108	    29	  89.7	    32	......T.....CA...............	CGAAAACGGCAACCTTCATAAAAACGTCTTTT	
      9047	    29	 100.0	    32	.............................	CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG	
      8986	    29	  93.1	    32	............CA...............	CAGGTTATACTGGCAAAACGTCGATGGCTCTC	
      8925	    28	  89.7	    32	..........GC.-...............	TAAATCAGCAAATATTGTTGTCTACCGTGTCG	
      8865	    29	  96.6	    32	.............C...............	AGCAGTTCGAGGAATAGTGACAGGCAGTGCAG	
      8804	    29	 100.0	    32	.............................	TTAATGTTTTGTTAATTTATGAGTGTGGTGAT	
      8743	    29	  93.1	    32	............AC...............	AGCAAATCGAAAATCCGGCTGTTTGAAAAATG	C [8738]
      8681	    29	  93.1	    32	............CA...............	TGAGGCTGCTGACGGAGAAATGGGACCTGTTC	C [8676]
      8619	    29	  89.7	    32	............CAC..............	CCGACCCGGTGCCCAGGAGAACTGGCTGAATA	
      8558	    29	  93.1	    31	............C..A.............	TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 	
      8498	    29	  86.2	    32	...C........CA............T..	CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC	
      8437	    29	  93.1	    32	............CT...............	GGCATGAGCGAGAACCACTGCGAGAGTGTGGT	
      8376	    28	  82.8	     0	..........A.CA.........-....A	|                               	
==========	======	======	======	=============================	================================	==================
        20	    29	  93.5	    32	GTATTCCCCCCGTGTGCGGGGGTTATCGG	                                	       

# Left flank :   GAGAACAGCCTGCCGCCTTATGGCATGGAGCCTTTCAAAAAACTGGTAAAAACGGTACACAACCATTACGACGACATCTTTGCCTACTGGGATGCGCCGTTCTCAATCACCAATGGCTATACCGAAGGGCTCAACGGCTTGATCAAGATGTCCAACCGGTTAGGTCGGGGTTATAGCTATGAGATCATCCGTGCAAAGACGTTGTACTCCAAAGAAGCCCGCAAGGTTGGCAGTGGCATTCGAGCAGGACGAGGCAAGGTCGAGTATGGACCGCACATTCCGACATTGTTGAAGCAGGCAGAAGGTGGAGAGTTGGATTAACGCGAGAGAGGGCGCGTCTGAGAATCCAACCAATGTTAGATTTTCGCAGGGTGGTGAAAAACAGAAAAATCCAACCAGAAGCAGCTTTTTGTCCGACTAAGAATCAAGGGTTAGAATGGATGAACTCCAACCCTAGAATGCAAATAGCCATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGATAGCGTTAAAGGAACATTTAGCCGCGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTACTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACAAACAGTTTTAAACAGTACCAAAGCAGACTGGCAAGGTTACAGCGCCAGCTTGCCCGTAAAGTGAAATTCAGTGCGAACTGGAAGAAGCAGAAAGCAAGAAC

# Questionable array : NO	 Score: 5.28
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.36,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGTGTGCGGGGGTTATCGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [40-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//