Array 1 25750-25051 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_GL538212.1 Megasphaera micronuciformis F0359 Scfld139, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	=====================================	========================================	==================
     25749	    37	 100.0	    40	.....................................	TTGCGTGGTCTTATGAATTTGTAAATCTCCGCAAGTATCA	
     25672	    37	 100.0	    34	.....................................	AAGGTGGAAAATTATGATACAGGTGCAGAACATG      	
     25601	    37	 100.0	    38	.....................................	GAGTTTAAACGGAACAACAATAAAATATGGTTTTGCAA  	
     25526	    37	 100.0	    37	.....................................	TAAGGGATTTAATTGCCAGATATAAAGATGATTGTAC   	
     25452	    37	 100.0	    35	.....................................	GTCCTGTTCGTAAATTTTACTTGCAAAGGCGTTCT     	
     25380	    37	 100.0	    36	.....................................	TGGGAATAGGTGAATATTATGAAAATTATTAACGCT    	
     25307	    37	  94.6	    35	A....................G...............	ACGGCAATTTACAATCATTCAGGAACTCAAATGTA     	
     25235	    37	 100.0	    36	.....................................	TTTAGGGATGAATTGATTGCAATGAATGATATTGTA    	
     25162	    37	 100.0	    38	.....................................	GTCTTGAAAAAAGGCGGCGTTCTCATATTCAAATGGAA  	
     25087	    37	  97.3	     0	C....................................	|                                       	
==========	======	======	======	=====================================	========================================	==================
        10	    37	  99.2	    37	TGTTTCCGTCCCCTTACGGGGTAACGGTAATTAAATC	                                        	       

# Left flank :   TCCCCTTACGGGGTAACGGTAATTAAATCCTACTACCTTGGCTAAGGTTGAGGAATTAAGAGAAACGGTTTCCGTCCCCTTACGGGGTAACGGTAANNNNNNNNNNTCCCCTTACGGGGTAACGGTAATTAAATCTTTCTAATGGATATTCGTATATTGGCGACGGGGAGCAGCGTTTCCGTCCCCTTACGGGGTAACGGTAATTAAATCAATCAGGAATTTTACGAAAAGTATCCGCAACTTTGCGTGTTTCCGTCCCCTTACGGGGTAACGGTAATTAAATCAAGAACAGACACTATGTAACTTACTTACACTTATCGTTTCCGTCCCCTTACGGGGTAACGGTAATTAAATCGAATTTTCCGATGGCCGCATGATACAAATTAAGCCCGACGTTTCCGTCCCCTTACGGGGTAACGGTAANNNNNNNNNNTCCCCTTACGGGGTAACGGTAATTAAATCTAAAAAAAAGAGTAAGATTATAGACATCAAGAACGGCA
# Right flank :  ACTGTCTTCTGTAATAACCATAACCATGCGGTTCATTTGATGATTTGCGGGGCAAAAGGATGTAAAGCACCTTCTCATTCAATTACACCTCCAAAATCAGTCAAAAATGGCTTTATTATCACAACGGGGATAAACACCTTCAAAAGACAGGAAATAATTCCATTTTTATTATAACTTACTTTTTTAAAGGTAAGCAAGAAAAAGCCTTTCTAAAAACTGCTTACCCTTTTCTAAACACGAAAAGATACTCATGAACAATGAGCAAAAAATTATACTTTACGCTGTTCGTATGCCGTGCATCTTCCGGCTTACCTACGGTAGCCGGAATAATCCACATATTGTCGACTCGCATCGCTCCTTCAATACGTTCTTGTGTACAAAGAGAGGCTACTCGCCGCGAAAAAACACCCCACTTTTGAGCCGCTTCCTTGACCGAAATATATTCCATGACTTACTCATACCTTACTACATTGTAAATAATATATTCCTATTTCGGAACA

# Questionable array : NO	 Score: 3.22
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TGTTTCCGTCCCCTTACGGGGTAACGGTAATTAAATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:54.05%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-12.30,-11.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.41   Confidence: LOW] 

# Array family : NA
//