Array 1 3222638-3220127 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044523.1 Halorussus sp. ZS-3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 3222637 37 100.0 36 ..................................... GCAAAGACGACCTCCTCGAAATCCTTCGTGAAGCCT 3222564 37 100.0 36 ..................................... TCCGCCGCTTCGCCGGTTCGGGTGACCTCGATTCCG 3222491 37 100.0 38 ..................................... GTGCCTTTGCGTCCGGCTTGACTCATTTCGTCGCCTGC 3222416 37 100.0 37 ..................................... TTGACTAAGGAGATACGCTGACGCTGGTCGAGCATTC 3222342 37 100.0 32 ..................................... AGACCAAGCAAGACCCGACCGAACCAGCAGAG 3222273 37 100.0 34 ..................................... GCTTCGGACGCCTTGCTGGAACGCGACACCCACG 3222202 37 100.0 35 ..................................... TCAATTCACGCCCATCAAGATTGGACGCGCTCGGT 3222130 37 100.0 38 ..................................... AAGACTACCGCACCCACCGTGGCCGCATACTCGACTAC 3222055 37 100.0 38 ..................................... AAGACTACCGCACCCACCGTGGCCGCATACTCGACTAC 3221980 37 100.0 34 ..................................... AGATTCTGTACCGACACGGAAATCTAATGTAACG 3221909 37 100.0 36 ..................................... AGTGTCGGGGTCAGGATTAAGGTCCGGATCAAGGTC 3221836 37 100.0 34 ..................................... AGGGATTGGAGAGAGCGGGTGGCTGGTTCGTGCC 3221765 37 100.0 34 ..................................... AGGGATTGGAGAGAGCGGGTGGCTGGTTCGTGCC 3221694 37 100.0 38 ..................................... TCGCCGAGCGTGTACGAAATGAGGGTACGAGAGAGAAC 3221619 37 100.0 38 ..................................... GGTACGTCTCGATCACGGCCGTCTCGGAGAACGGCGAC 3221544 37 100.0 35 ..................................... AAATATCGCCGTAAATCACCGTTTAATCACCTCGT 3221472 37 100.0 34 ..................................... CGTTGCAGTCTGGACACGTCCCCGAAAACGTCTC 3221401 37 100.0 36 ..................................... TTTCATCAAGAGTGCTGGGAGGATTCGTGATGTCCG 3221328 37 100.0 36 ..................................... AGAGGCAGAACACGCGCGAGCAGTGACGTCGGGGCT 3221255 37 100.0 35 ..................................... AGCAGAAACAGCACTGTGAACGCGGTGCCGATAAT 3221183 37 100.0 37 ..................................... AGGTACTCCTGAGCGCCGCCGTCCGTGTAGTCGAACG 3221109 37 100.0 36 ..................................... GCTGGCCGTGGATGTGGTGGCGGCAGATTACGCAGT 3221036 37 100.0 35 ..................................... TCGATTGGGTACAAATCGACGGTGCCGAACATCTC 3220964 37 100.0 37 ..................................... ACAGCGTAGGAGCCGAGCGAGATTAGCATACTGTCGA 3220890 37 100.0 38 ..................................... TCTGGGTGGCCGACGCCTTCGGTAGCATGGCCTTGCGG 3220815 37 100.0 35 ..................................... TTCTCGGTCAACATATACGATGTGATTTACAACAT 3220743 37 100.0 37 ..................................... TGTAATCGTCACTGCATGGCCGTGGGTGTACGACCGA 3220669 37 100.0 35 ..................................... TTATCGACACCATCTATGATGTCGTCTTCAAGTGG 3220597 37 100.0 35 ..................................... CGTATGACATTCACCCACCGGGACGCTCGTCGTCC 3220525 37 100.0 34 ..................................... AGTACGTCTCGACCTTCGAGCAAGACGTGACCAT 3220454 37 100.0 37 ..................................... TCTGCTACCTTTACGACACATGGAATCCAGAAACACC 3220380 37 100.0 35 ..................................... CTTGTTCTGGAGCGACGTGGCGACGTAAACGGGAC 3220308 37 100.0 35 ..................................... CCGTTCGAGTGTGCGGGGATGTTCCCGGTGTTGTG 3220236 37 86.5 36 ...........A......C...GA....G........ ACTGATTCATCTGGCAACCCAATTTCTCAAGCGAAC 3220163 37 67.6 0 .A.A.......T.....CA.TGAG.A.....C..C.. | ========== ====== ====== ====== ===================================== ====================================== ================== 35 37 98.7 36 GTCGCAGAAGCCAGAAAAGCCACTACGGCATTGAAAC # Left flank : ATCGTCAACCTCGGCGGTGGCGCACGCGATATTCTTCTCCCGCTGACGATAGCGACGCTCGTCCACCTAGACCGCGTCGAGACGGTGTTGTTCTTCAGCGACCTCGACCGCTCACATCAGGAGTGGTCACTGCCGAACGTCACCGCGAACCCACCCACGAAGTCGCTCGAAACGTTGCAGGTGCTTGCAAACGTCACCCAACCAATTTCGATTTCCGAGCTATCGAGCCACAGCACAGTCGCAAAAAGTACGGTCGGTCGCCACATCGACAAACTCGCCACCGTTGATGCCGTACGAACTGAAACCGAAGGCAAAACGAAGCAGGTCGAGCTTACACTCACCGGAAAACTACTGCTCCAGCGAACCCCCGATTCTGCTCGGTGACCGAAGTCTTCATCGACCTTTTTAACCTCTGTGTACAGCCCCGATCCACGAAGAGCGGTGCGTGAACGAGCGGTGGAGCAAGCTTTATTGGCCCTATGACTGTATTTTCACCCCCT # Right flank : TCGAGTCACTGCTGCTCGTCTGTGCATTCGTTTATTGAGAAGTAAGTACGAAGAGAGACGTCTGAACCACCGCTGTGAGCCTCGCCTCACGCGCCCAGCAGTTTTCACGCGCGCCTGCAGGGGTGCAGGCGCGCACAATTGGGCCTGCGAGACCCCATGAACGAACGAGCAACCAACTCCAACTCGTTGACTGGTGAACAGGCACGCGAAACGACCACGCAGATGACCACACGTGAGGGCAGCGAATGACCACTCACGTCTGCCCGACATGCGAGCGCGGATTCGAAACAGAGCAGAATCTCAAAATCCATTTTTCCGAACGACACGGCGGACAACTTCTGACCCAAGAGTGTGATTACTGCACGAACGAATTCTACGTCGATTACGCGAAACGGTTCTGCTCTCGTTCGTGCTGTCGGAAGAGCGACTTTCAATCGGGAACGACCACCTCAAACGACAAGCGTCGAAAAACCACCCGAACTCACTCAGGAACGACCAAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGAAGCCAGAAAAGCCACTACGGCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,14] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.20,-4.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 3233338-3237041 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044523.1 Halorussus sp. ZS-3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 3233338 37 100.0 34 ..................................... GATTCCCGTGCCAGCCGTTCTCCGGCGCGCGGAA 3233409 37 100.0 36 ..................................... TCATAGAGAACATCACGGATAGTACAGAGATATTTG 3233482 37 100.0 34 ..................................... ACTGAACGATGTTCCCCGCTAGATCGTACTCACC 3233553 37 100.0 38 ..................................... AAGTTGAATACGAGACTGTAGACTGCGACAGTTGCGGG 3233628 37 100.0 35 ..................................... ACAACGGCACCGGACGCTTCCAAAGCACCAACGAG 3233700 37 100.0 36 ..................................... GAAACGCAGTTCGAGATTCCCACCGGACTGGAAGAC 3233773 37 100.0 34 ..................................... AGTATCGTGACGCCGATGATGAGCGTATTCGTCG 3233844 37 100.0 37 ..................................... CATACAACTGGCGGACCTCTACAACACCGACACGGGC 3233918 37 100.0 36 ..................................... TATGCGCGGTGACTACGTCAGCAGTTGGCCCAAGCT 3233991 37 100.0 36 ..................................... TTCACCAAATTAGCGACGAGTCTCGCTACTGAGTTC 3234064 37 100.0 38 ..................................... CACACCGACTCACGGAGTTCAACGACGATTACGACGGG 3234139 37 100.0 37 ..................................... GAGGAAGCCCGCATGGACAAGATCGCGTTCAACGTCC 3234213 37 100.0 38 ..................................... TGGTAGAGGACCAGCACATGTGGTTGAAGATTGGTGAT 3234288 37 100.0 35 ..................................... ACACCGAAGTCGAGGAGAACGACGACATCGAGACT 3234360 37 100.0 38 ..................................... AAGGCTTCCACGAAGCGATAGATGACGCATTGGATGCA 3234435 37 100.0 34 ..................................... AGACAGATGCTCCGGCGGTTGTCGTGCGCGGAGA 3234506 37 100.0 36 ..................................... ACACTCTCGCGCCGAAACTGGTTGCGGACTAGCCGG 3234579 37 100.0 36 ..................................... AGATACACTGTCGCGCTTGGGTGTCGGTCTGGATAG 3234652 37 100.0 37 ..................................... CGGTCGCCGCGCGTCGCCGACGCAGTAGGGGCAAATA 3234726 37 100.0 36 ..................................... GCTTCGACCTTGTTCCAGCGAACGCGGACATGGCTG 3234799 37 100.0 36 ..................................... TCTATCAGGGATGCGACCACGAGTGCCGAACACCAA 3234872 37 100.0 38 ..................................... TATTTGCATGATGTGGATGTGCGTCCGGTGGGTGTGGT 3234947 37 100.0 38 ..................................... TGGGTTGCGGATAGTAGTGAAGCATCTAGGGAGGTTCT 3235022 37 100.0 37 ..................................... ATGCGTTGGTCTTGACTGCTCGCCAGATGAGCAGTGA 3235096 37 100.0 38 ..................................... TCACCGTCGTCTATCAACGCTACTGCCGCTACTTCCGG 3235171 37 100.0 38 ..................................... CGAGCGGCGCGGCCAGCATCCAGATTCCTGACGGCCGG 3235246 37 100.0 37 ..................................... GACGTGTCGGTTACATCGCCCCCCTCAAGTACTGGAT 3235320 37 100.0 36 ..................................... TCGAAGACGCCGATGATGTCCAACAGACAGCGGTTT 3235393 37 100.0 37 ..................................... GATGCGGCTTGCTGTGGAGGGACTACACTCATGAGTA 3235467 37 100.0 35 ..................................... AATATATCGGAAGCCACGGGGAAGAGTTGTTCAAT 3235539 37 100.0 35 ..................................... AATATATCGGAAGCCACGGGGAAGAGTTGTTCAAT 3235611 37 100.0 34 ..................................... TTCGTTATGCAGCCGGGACTCGATGAACAGATGC 3235682 37 100.0 41 ..................................... AGAACTGGTTCTACGATATCCCACTCCAAGACGACACGCTC 3235760 37 100.0 36 ..................................... TAGAATAAGACGGCGTCCTGTCCGCGGGTCAATGCC 3235833 37 100.0 33 ..................................... TCCACGACACGCTCAACGACCTGATGGCCGCGG 3235903 37 100.0 34 ..................................... TGGCCGAGCAGTCTGGTCTCGGAGACTTCGGGGC 3235974 37 100.0 39 ..................................... ATCACGCGCAACTCGACATTGAGCCCCAGGGAGACGACG 3236050 37 100.0 36 ..................................... GAGCGATGAACCACTCCGACGAGGTCGCGAAGGTCG 3236123 37 100.0 36 ..................................... CTCGTCGCTCGCGACCTCGTCGGGCTCTCCCGCCCC 3236196 37 100.0 36 ..................................... AGCGTGTAGATTCCGAAGTGGTTGTGCCTCAAATCC 3236269 37 100.0 38 ..................................... ACTTGGTGGCCGTCTCGTGCCTGACTCGTGAGGAACGG 3236344 37 100.0 37 ..................................... AGGGTCACGGGGAACCGCCGCACAAGCCAGCGCGCGG 3236418 37 100.0 34 ..................................... TGGAACCTGGAGAACGGCGCGCTCGCCTATTTCG 3236489 37 100.0 34 ..................................... CGGTCGCGTCGTGGTTCGACCTCGGGACGGTCGG 3236560 37 100.0 37 ..................................... ATATTGTGGCCGCGGAGACCGTCGCTCAGATGGACTT 3236634 37 100.0 35 ..................................... AGGTCGCCCGGACTCAGGCCGAGTCCGGCCGTAAT 3236706 37 100.0 37 ..................................... CGTCCGAAGCCCCTGAGACGTTCCTGCGCGTAGTACG 3236780 37 100.0 38 ..................................... GAAGCTGGCTTCGACACCAACGCCCGAATCAGCCGGAC 3236855 37 100.0 39 ..................................... CGACGGCCGTTCACGGTCACGAGGTGCAAAAAGTCGCGG 3236931 37 100.0 37 ..................................... ACGTTCGACCGGAGTTTCTGTCTGAGGTTCAACATGG 3237005 37 86.5 0 ...A...................A.......C..G.G | ========== ====== ====== ====== ===================================== ========================================= ================== 51 37 99.7 36 GTCGCAGAAGCCAGAAAAGCCGAGAAGGCATTGAAAC # Left flank : GTACAGCGTTTCTCGACGGAAGGCAATTCGCCAGCAAGTGATTCTCCTCCGGAAAACGATGACAGGCGAGATGGACGAGTACCACGCGCTCACATTCGATCGATGACCATGCGACTCGCAATCACCTACGACGTAAGCGACGATGCGAACCGTCGCCGAGTGTATCGCACGCTCCAACGGTACGGCGCGTGGAAACAGTACAGCGTCTTCGAACTAGAGGTATCGAAAACCGAGCGCGTCGAACTAGAAGACGAACTTGAAGACCACATCGAACCTGCAGATGGCGACCGAATTCGAATCTACCGCCTCTGTGAATCCTGTCTCGACGACACGACCGACCTCGGTGCAGATCAACCCGGCGAGCAGTCGAACGTTGTCTAACTGGCCGAGTCTTCATCGACCTTTTTAATGTCTGTGTACAGCCCCGGTCCACGAAGAGCGGTGCGTGAACGAGCGGTGGAGCAAGCTTTATTGGCCCTCTGGCTGTATTTTCACCCCCT # Right flank : GAATCGTTCTCCTGCAGGCGCGCGAGAAAACTGCTGGAAAGTGATGGAGAAGTTCGGAACGAGTGTATGTCGTCGCGTCTCTGAGGTCGGATTGTACACTCTCCAGAGACATGGTTGACGCGGCGAGATTGCTCGAGCGATTCGCTAGGCGGACTGCTGTTCGTGTACACCCCGCTAATCAGCCGGGAGAATGGCTCTTGTGGCAGGGTGGACACTCAACGAGAGTGGTTGCACATGGGCCTGACTAGGGTAGCAAGGAGGCAAAGATGAGAACTAGGGATAGACGGCCTCTGTCCCGGGTTCTTGATTTTGAGGAGGTCGGTAGGTTAAGCTCGGAAACCGCGATTTCAACATCAGAATCGGGTGTACACCGCCATCCTCTAGTTTTCTGTTGAGATATTGGATGGTCTGGCGAATGTTGGCTGACCCCCTAATTCGTGCGAATACAGGGCTAACAAGCGCCAAGAGAGTGGGTTGGAACGCATAGTCGTAGCCATCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGAAGCCAGAAAAGCCGAGAAGGCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [15,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.80,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA //