Array 1 22597-22030 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZVK01000039.1 Escherichia sp. MR NODE_39_length_43371_cov_12.086248, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 22596 28 100.0 32 ............................ TGAATGCGCGGTTCCCATTTTGCGAGCGCGCC 22536 28 100.0 32 ............................ TGGACGCTGATGACCTGAGCGATGAAGAAAAA 22476 28 100.0 32 ............................ GGCAAACCAGGATGCGTATTATGACGACGAGC 22416 28 100.0 32 ............................ CTGCTCCTCTAATTTATGCAGATATGCGTTTA 22356 28 100.0 32 ............................ TAATCCATTACACTGCCGGGCAGGTAGCTCAG 22296 28 100.0 32 ............................ GGAACAGGCTGGATGTCGTAAAGATGATACAC 22236 28 100.0 32 ............................ CAGATTGCCAGCGAATAACGCTGATGTGGGGC 22176 28 100.0 32 ............................ CGTGCATCATGAATCATGCTGTTCAGCACGCG 22116 28 100.0 32 ............................ GCCGAAGCCCGGCGTAGCCGGTACGGATCATC 22056 27 85.7 0 .......A...C........-...T... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGCTGGGAGGTATACGAAGCCATCTATATGCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTAAAATATGGCGGTGAGGCGGGGATTCGAACCCCGGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTTTTGCTGCCTGACCTCATGGGGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAAGAAGAATTTATTTAGATTGGTTTGTTTGGTTATGCATTGTTCATGCGGTTCATCCGTCCAGGATTGTGAATGTATATGCTCTGGGCAATTATTTATCAAAAGCTACGCTGGAAATATGAGATTGAAGACATTCTAATCGACCCTTTTTTCAGGGTGAGATGTAACGCATTGATTTTATTTATTACTATTTTGATGCCTCGAAAAAGGGTATGAATTGGAGATTTTGTAAGTTTTAACAGTAAATCAATCGGATAGTTTGTTATTATTCCA # Right flank : ATCCATAACCCAATATTTATTTTCTTCCTTAACTCCAGACGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCATCAGGCGGCAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTGTTAGGCAACGTTTCAAGAACGGTGCCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGCGCGCTAAATCGCAACAAACAGGTTTGGCACATAACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGAGATAAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 32695-31465 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZVK01000039.1 Escherichia sp. MR NODE_39_length_43371_cov_12.086248, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 32694 28 100.0 32 ............................ GGATAACGTCGTTGCCTTGCAGCGCGATATAT 32634 28 100.0 33 ............................ CACGCAATAACGAATAGCCATCTCGAAAAGATG 32573 28 100.0 33 ............................ GTCACTGAGGGCCGCGTGATTAGCGCCGAGCGT 32512 28 100.0 32 ............................ TGGTGTACCTGCCGCATCGAGAGTCACATATC 32452 28 100.0 30 ............................ AAAATACAGAAAAGTAAATGTGCAAAAAGT 32394 28 100.0 32 ............................ GATAAGCGGCCGGGAATGAGTTCCGTGCAACT 32334 28 100.0 32 ............................ GCTACGCCGAAGACCCGACAACTGAAATCCTT 32274 28 100.0 32 ............................ GTGACCGTCAAACAAGGGGCAATGTCGATCAT 32214 28 100.0 33 ............................ GTCCCACAGTTCGAAACCCACGTTTGCTGTTAC 32153 28 96.4 32 .....................C...... GTACTGGCGGGTAAATCTGTTACAGCAATCCC 32093 28 100.0 32 ............................ TTGCGGGAGTCTTCGTAATCGTTACACGCCGC 32033 28 100.0 32 ............................ TTTGCGCTCAGTAAATGTCATGGGTTCGTTAT 31973 28 100.0 32 ............................ TGCTGTGCCGCTTTGTCAGCCGCCGCTTTTTC 31913 28 100.0 32 ............................ GCTATGTCGGCATCAGCACTGGCAAAAAGACC 31853 28 100.0 32 ............................ GTGCAATCCGTGCCAGTTCTTCCGCTTCTTCG 31793 28 100.0 32 ............................ GATTGAATATCTGCGAGATCAACGGTGGTTGC 31733 28 100.0 32 ............................ GCTCTGGCTACCGGCGGTTGCAGGTCTGGCTC 31673 28 100.0 32 ............................ GAATGCCGCGCTGCGTTTTTCGTCCAGTGTGC 31613 28 100.0 32 ............................ TCATTAATCGCTCGCGAACGCGCGCTAATGAG 31553 28 100.0 32 ............................ AGACACTCTCTGGTGGAGAGAAGCGGAAGATT 31493 28 89.3 0 ....................T...C..T | C [31469] ========== ====== ====== ====== ============================ ================================= ================== 21 28 99.3 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGTTGCAGGTTCAGCTGGATCAAAAAGGAGTTTCTCTGGAAGTGAGTCAGGAAGCACGTAACTGGCTGGCCGAGAAAGGTTACGACCGGGCAATGGGTGCACGTCCGATGGCTCGCGTCATTCAGGACAACCTGAAAAAACCGCTCGCTAACGAACTGCTGTTTGGCTCGCTGGTGGACGGCGGCCAGGTCACTGTTGCACTGGATAAAGAGAAAAATGAGCTGACCTACGGGTTCCAGAGTGCGCAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATGGTGTAAAGCCTTTTAAGTAGGTTGATAAAGTCCGTAATCCTGTATGGGGTTACGGACTTTTTTGTTTGTGAGGTGAGGGCGGTTGTAACCCTAATTTTTATGGTTGCTGTAACTTATTGATAATTAACGCTGCTGGAAGGCAAGGATAAAAAAGGGTGGCAGCAGGGAAATTGGATAGTTTTACTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : ACGTAATGGTAGACGTTTGGTCATATCATGATGCTCTCAACGTCAAAACATTAGCCTTAGCACACAATAACAATTGTAATAATTGCGACAGAAATCAATTTCCTGCACAGAAATCAATGTTGTACTAATCCTAACGCCTTAAAACAAAAATAATCACAGGATGTGTTTATGTCTTCAAATTACCTTACTCCTTCTGACCTCAAAACTATTCTCCACTCCAAACGCGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGAGTGGAATATGTTACCAGTGAAGGTAAGGAGTCGTACTACTGGAATATCCCTATTGCGAATACCACGGCGTTGATGTTGGGGATGGGAACTTCCGTTACCCAGGCGGCGATGCGTGAATTTGCCCATGCGGGGGTGATGGTAGGATTTTGTGGTACGGATGGCACACCGCTTTACTCCGCCAATGAAGTAGATGTTGATGTCTCCTGGCTCAGCCCACAAAGCGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //