Array 1 2163062-2162563 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061472.1 Geobacillus thermoleovorans strain SURF-48B chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2163061 30 100.0 35 .............................. TCGACGGGTCACATATAAAGAAGAGCCAAGTTTCC 2162996 30 100.0 39 .............................. GTAGGTGGAGGATGAGAGGATGCAGACTCCGGCTGTCCA 2162927 30 100.0 35 .............................. TCAACCCCACAGTCTGTCTAAAAAGTCATCGGTCG 2162862 30 100.0 35 .............................. TATTCTCTCGCTGTCTTGGCGATTGGCTGGCTTCC 2162797 30 100.0 39 .............................. GCTACATTTGAAAGCTCTTGAGTAATTTTCAACTTGTTT 2162728 30 100.0 39 .............................. GCTGCATTTGAAAGCTCTTGAGTAATTTTCAACTTGTTT 2162659 30 100.0 37 .............................. TATCCGCTCATTGATGACCCACATTCCGGACATTTGA 2162592 30 93.3 0 ...............G....A......... | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 99.2 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : AAATCACCCAGATTGTGATGGGGATGTCTGCTCGGACGAGATGGGAGGAAATATGGAAAGGATCGCTCATTAATGTAATTATGCAGCAACTTAAACATGTTGATGTGCTTGTTGTATCTGACAGATAGAGAAGAGGGGCATCTTTGATCATAGTTCCAAAAGAAGACTCCCGTTCGCAATTCAAGCAATAAGCGGAAGATGAATGTCGGCTGGCGCCAGCCAAAACGTATGATAAAATCAATGTGCATTGCGTACAGGCTGTTGACGGACTTAAGCGGCTAAGCAGCGCACGAGACGAGAGGAAATTCAAAGTGCACGCTGTGCATAGCATTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATCTTTTTACACACTTCAAGCCTACAGCCATCGTACATGAACACGATTGACAGAATTTTTGGATTATGGTATTCTGAAAATAACTTTGGAGCAAAAAGATTGATATATCAAGTGCTTTCTGGG # Right flank : CTTCGTGTTTTGTGCGAACGATCGTCGCAATAAACGCTTTTCATCACACCGTAAGCAACTCCATGGAGCGCACATAGGTTTAAATCTGTGCGGTGGAGAGAGGTTAAGAGTTGGCGAAGATGACTGAAAGAGATGAATCAGCATTCGCGGGCTATGTCTGTGCGATACCGGCGATCCGCTTCTGCCGTTTGTTTTAGGCAGGAGTTTTTTATTGTTATACAGCCGCTTTATGTCCATCCCGAATTGTCGTTCCAGGAAGAGAAAACGGCGCAATTTGTGTACGAGACGCTGCAATCATTCGGCCATCTTGAGTTGTCGCGGCCGACGAAAACGAGCGTCATGGCGCGGCTCATTGGCCAACAGCCAGGCCGGGTCGTCGCCATTCGCGCTGATATGGACGCATTGCCGATTCAAGAGGAAAACACGTTTGAGTTTGCCTCAAAAAACCCAGGCGTGATGCATGCGTGCGGACATGACGGCCATACGGCGATGCTTCTCGG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2781151-2781383 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061472.1 Geobacillus thermoleovorans strain SURF-48B chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2781151 36 100.0 30 .................................... ATTCCGGATGTAACGACAGACGGTGGTGTC 2781217 36 100.0 30 .................................... CCCACACGCTGGCGATTCGGTTTTTCATCG 2781283 36 100.0 29 .................................... TCACATGGGAACAAATCGAAGAAGCGTAT 2781348 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTCATAGTTCCCCTGAGATTATCGCTGTGGTATAAT # Left flank : AAACAAGGGATCAAACAAGGTATTAAACAAGGGCGCCAACAAGGGATTGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGGTATGATGTCGACACGATCCACGAACTGACCGGGCTGCCGGTTGAGAAGATCGAACGGGTGAAGGGGTAAGCAGAGCAGACTCTTCGCCGTCGAGCCTCACATTGTCGTCGACCCCCAATCGTGCAAAAATCCCCGGGGATCGACGACATTGGTTTTGATCGCTTAATCTCTAAAGCCATCATGGATGGGCTTGGTTGACAGAATATTCGGGACGCGTTATGCTGAAGTTGCGGTTGCGGGGGAAAGCTTGATATGGCAACGCTTTTTGGATTTTTACCATACCTTATGAGGGATTGAAACGATGCCCCATTCCTACTTCGGGGTCGTTTTGTGTTTTTATCGTGCCTATGAGGAATGAAGACACCTGTTCTTCCTATAGCTTATCGGTAGTATGTCATTGCTTTAAT # Right flank : TTGCCTCCCGTTGTTGTGTACGTTTCCTCGCGTCATAGTTCCCCTGAGATTATTGTAAATTAGCACATTATTTCAGAATCACTTTTTCAAATTATTTCAGATGGATTCTGAAATAATGTGCAAAATTTTTGCGGATTGTTCCGGATTTTGCACATTCTTTCGGAACGTTTGCACGCTCTTTCAGATGAAGATTTCCAGCGCGCCTGATGGACCGATGGAAAAGAGAAAGCACAAAAGAGGCCGATTCGGCCCCTTTCGTGCTAATACCCCATTTCCTCTGCGGCCATGCGCACCATTTCTTCGTCAATGGCGTCCTTTTTCAGCTGATACCCGTATAACAGGCACGTCGTGGCCAACGTGTTGATCACCCGAGGCCATCCCCGCGACTGCAGGGCAATCGCCTCTAACGCCGATGGGGTGAAGATCGGATGCTTCGCCCCGGCCTGTTTCATCCGATGTTCGATGTAGCCCGCCACCTCTTCCTTCTCCAGCGGCCCCAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGATTATCGCTGTGGTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 3 2798016-2798308 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061472.1 Geobacillus thermoleovorans strain SURF-48B chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2798016 30 100.0 35 .............................. TCCGAACGGCTTTAATGAGGAAGATAGCAAGAATA 2798081 30 100.0 34 .............................. GGCGTCTGCCTCTCCCAACAACTCCGCGATCGCA 2798145 30 100.0 38 .............................. TGATCCAGCCGGTTATAAACGTGAAAATGGTGAGCTGA 2798213 30 100.0 36 .............................. TATTCATGCCCCCGCTCGCTTTCCGGGATTCCCACG 2798279 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 100.0 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CCACCCCATCGGTTCACTTGCCTGCGGAGTGGCTCGCCAAACTCGCCTCCGTAGCGTCAGCGCCGCTGCAGCCAGTGAAAGAAGCGATGGCGAAAACGGAAAAAGCGGGATACCAAGAGGCGATCATCGGCCGACTGCTTCGAGACATAAAAAGTTAGCACTCGCCCTTGTTCATGCAAGTGTTGGGATTCCAATGTTTGTATTCGTCTTGCCTGCGATGGATGGGCAGGCGGCGCCCCGGTTTTATTCACCGCATGACGAGCGCTTGCCCTCGCTTAGGCAAACAGCAATCGGCAAACAAGGCACGCCAAACGCTAGGAAGCAGTCTTCGTTTGTCGTCGACCTCCAATGACGCAAAAACCCCAGGGGGTCGACGACATTGGTTTTGATCGCCTGATCCCTACAGCCATCAAGGGTAGACTTGATTGACAGAATCTTCGAAACGTGTTATGCTGAAGTTGCCGTTGCAGGAGAAAGCTTGTTATGGCAGCGCTTTTTGG # Right flank : CTTCGGCAGATGATCAAAGAAGGCCTGGAATCCGGGATTAGATTCGGCACAGCGAACCGGGAAATCTGCTTGTGTCTACTAGTTGCAATGAATGAACTGGGGGTGAAGAAACCATGATCACGATCTATGACTTGATCGGCTACATTCAAAACATGGACAACATGGACAAATTGGATGAAATCATCAGTCGATGGTACTTTCAAACGTCTGTCTGGACATCACAGGTGAAAGAAGAAGTCAAAAAAGCGGTGGTCGAAATCCTACAACTAGGCGAACCTAAAGTGTACCAGTTTTTTGTGGATATGTACGGTCTTAAAATGTGAAGTTTTTATCGTACCTATAAAGGGATTGAAACGTCATCCCGGTCGTGACAATTGGAGTTCCTTCTGCCGTTTTTATCGTACCTATGACGAATTTCTCACTGTGAGCAGGATGCCGCCTTGGGGACGGCGAATAGAAAAAGAGAGACCATCAAGGTGAGGTGATTGAATGGCGATTGA # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 2800773-2801262 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061472.1 Geobacillus thermoleovorans strain SURF-48B chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2800773 30 100.0 37 .............................. TCAACGGGATAAAAAGGAACTGTCGATCGGCCATATT 2800840 30 100.0 36 .............................. ATTGTGAAGGAATTGGGGTACGAATGGGACCGGAAC 2800906 30 100.0 36 .............................. GATTTCACCGACACTAGCCGGTAGGCGTTGATGAAA 2800972 30 100.0 35 .............................. CACCTTACATCCGGTCAGGCACTCGCCTATTTTTA 2801037 30 100.0 35 .............................. GCCGACTGTGCCGCCGCATTTGCTTCGTTTGCCGC 2801102 30 100.0 37 .............................. CCGTTTGACCTTTATAATATTTTGGCTGTTATCAATG 2801169 30 96.7 35 ................C............. CGGAGTCGGCCGCTTTCTCCACGCGTTTCCGCCCA 2801234 29 73.3 0 ......G...CG.....A..A.-GC..... | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 96.2 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTATGAAACGATCGATGGCAAAAAGAAAACGCATTTTTTCGGGCCGGACGACGACGTCTTTCCCCACCTCGTGGAGCTGAATTTCCGCCATAAATACGAAGCGTACTATGGCGTCGAGCCAGCAGAGAGATTGGTGATCCAGCCTGTCCATGTCCACCACCGTCATCGAGTGGTAACACGATTCAAAGATATGTATATTACGGGCTGGTTAGGCCATTATCGTCTTTCCTCTTCTCCCGAACAACTGACGTTTCTATACCACGTTGGCCTAGGCAGCCGCAATTCCCAAGGATTCGGCATGTTTCGGTTAATCAGCGAGTGAGCCATTCTGATTGTCGTCGACCTCCAATCGTGCAAAAACCCTAGGGGGTCGACGACATTGGTTTTGATCGCCTGATCCCTACAGCCATCATGGTTGAACTTGATTGACAGAATCTTCGAAACGTGTTATTCTGATGATGACGTTGAAGGGAAAAGGTTGATATGACAACACTTTTTGG # Right flank : CCCTCTTCAATGTCACGCCATCGTATGAACGTCTTCCGTTTGAAGAAACCGGATGGCTGCACTTCCCCGATCGACCGCTTCGTTTTGCTTCGGCTGCTCATTCTTGCGCCGCTTGCTTTGCAGGAAGCCGCTTTTTTGTTTCGCACATGGAGAACGTTTTGGCATCTGCTTTTTTTGTATGGCCCCATTGATCCACCAGGCATGGTTGTTCACCGCCTTTCTTTGCCGCTGCTGCATTTCCTCAGTCCGATGCGATATACTTGACATGGGAACAATCACGCTTCTTTCTCGTTCACCGTCGTGTCGGCGGACATGCTGCGTTGGCGTTGGACGGTTTGAAAGAAGGCGGAGAAAAGCGACAGGGGTGGGATGGATGCGCCGCAAACTTCGCGATCTTGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAGTCACCGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGGGAAGATATGAATGAGC # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //