Array 1 362409-361884 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046374.1 Flavobacterium psychrophilum strain CHN6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================== =========================== ================== 362408 42 100.0 27 .......................................... ACTGAAAAAAGCACCATTTTCAATATC 362339 42 97.6 27 ............................A............. AGCTGAAAAAACACCCCTTCTAATAGT 362270 42 97.6 27 ...T...................................... GAGTGCAAAAGCACCTCGATTAATAGT 362201 42 97.6 27 .A........................................ CTCTGCAAAAGACCCATCTCCAATAGT 362132 42 100.0 27 .......................................... ACTGAAAAAAGCACTATTTTCAATATC 362063 42 100.0 27 .......................................... ATCTGCAAAAGCCTCATCTCCAATAGT 361994 42 97.6 27 ............................A............. GCCTACAAAAGCATACCTTCCAATAGA 361925 42 78.6 0 ...TG.............A.....C.........TT.TTG.. | ========== ====== ====== ====== ========================================== =========================== ================== 8 42 96.1 27 AGTCACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Left flank : CGTTAGCCGTTTGAAGCTAACCTTTTATTGTATAAAATATTTTTTTAAAATTACTGAACAATAATTGTTTTTGTTGCCTTACCTTGATTTGTCATTACTTCTACAAAGTAATTGCCTTTTGCAAAGCTTGAAACATTTATTTCTGAATGATTAGTTGTTTTTATTAACTGCCCTAATGTGTTGTAAAAATTCACTTTTTGTAATTGTAAGCCCTCTTGCAAGGCTATGTTTAAAATTTCTGAAACTGGGTTTGGGTATATTTTTAAAGCACTTTCTATTGCAAATGAATGATTAGAAAGTAAACCACCAGAAATAGGGCTGAAATTTCTCCAAACCGCGGCTGCCTGATAAGCGACTTGCGTACCAGTAGGAACATTTAAAGCACAGTTTGATTGAGTAATATTGCCGAAGACATTTGCATTAATAACTAAAGGGCTTGTAATATGGCAATTTACTGTCTTTAAACTTCTACAGCCTGCAAAAGCATCCTCTCCAATAGC # Right flank : ATATTCAAAAGCAGATTCTCCAATAGCAGTCACGGCGTAGTTTTCCGAATTATAAGCTACTGTTTCTGGTATTTCTGCTGCTCCAGTAAAATTAGCGTTTCTAGCTACCTTAACAGTAAAAGGAGCTGTTGAAGAAGTAATAGTATAATTTATACGGTTTGCTGTAAAATCTTGTGCTATTCCTAAAAAAGGAATTAAAATAAGAAATAATAATTTTTTCATGTTTTTTGTTTTTAATTAAAAAATTATGTGGTTTACAAAAGTAAGCTAGATTTAGAATAAATACAAATAATACTTTGTTTTTTTGAGATTGGTCTTTAAGTAGGTGTTGTTTCTATATGCCTGCAATTGTCTGATTTTGCTGTTCTTTTTGTTATATTTGGCTTTGCAAACGATTAATTAGGGACTAAAATTCATCAAAATATTGCTTAATGTTCTTTTTTTTATTTAGAAGCTTTTTTTGTATAATGTTATGAATAGAAAAAGGTTAGCCGTTCGAA # Questionable array : NO Score: 2.62 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.12, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTCACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Alternate repeat : AGTCACAGAATTAGGAATTGTAACTGATATTAAACCAGAACA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 2047855-2046217 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046374.1 Flavobacterium psychrophilum strain CHN6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 2047854 46 71.7 29 A.AA.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG T [2047850] 2047778 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 2047702 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 2047626 46 100.0 30 .............................................. AGCGATGGAAAATGCGCACGAGCTTACGCT 2047550 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 2047474 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 2047398 46 100.0 30 .............................................. ATTTAATGTAATTGTACCCGAACCAGCTCC 2047322 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 2047246 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 2047171 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 2047095 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 2047019 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 2046943 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 2046867 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 2046792 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 2046716 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 2046640 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 2046565 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 2046489 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 2046414 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 2046338 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 2046262 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 22 46 98.6 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTTGCGTGGTACATCAAATTAGAAACGCTTGTAGATATGTGGTATGGAAAGACAAAAAACAATTTACAACCGATATGAAACTTGTTTATACAGCACCAACAAAACAAGCTGCCGCATTAGCTTTGGAAGATTTTGCTCAAAAATGGGAATCCAAATATGGTTATGCCATCAAATCCTGGAGAGAAAACTGGGACGAATTAACCGTGTTTTTCGACTTCCCGCTAGAAATTCGAAAAATAATCTATACTACAAATTTAATAGAAAATTTAAATGGAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAA # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //