Array 1 228476-230093 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXLP01000003.1 Helicobacter sp. MIT 14-3879 H_sp._nov._2_14-3879_3_24447043.5827, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 228476 36 100.0 30 .................................... TACTTTTTATGAGCTTTGTGCTATGGCTAA 228542 36 100.0 30 .................................... GACACAACATTGGGATGTAATCGGTGTAAA 228608 36 100.0 30 .................................... CATATTATTACACGCAAGAACCCTATCTCT 228674 36 100.0 30 .................................... GAATATATTTTATATATTTGTGATGATAAG 228740 36 100.0 31 .................................... TATCTTTTTAGAGGCAATGATAAATTACAAA 228807 36 100.0 30 .................................... AACCAAGATGAGTCTAATGTATGGCAGTGG 228873 36 100.0 29 .................................... TAGTTTGCATATTTTTATTAATTCTTTAG 228938 36 100.0 30 .................................... TATGCTGGACATATTAAGCTAGTAGATTTA 229004 36 100.0 30 .................................... AGAAATAAATAAAAGATACATCACAAATAA 229070 36 100.0 30 .................................... AAATGATTATTACTTTTTATATTTGCATAT 229136 36 100.0 29 .................................... TAGTTTGCATATTTTTATTAATTCTTTAG 229201 36 100.0 30 .................................... TATGCTGGACATATTAAGCTAGTAGATTTA 229267 36 100.0 30 .................................... AAACAATGATTTTAAAATAGCATAAAAGTA 229333 36 100.0 30 .................................... ATCATCCCCCCGCTGCATTTTGCTTTTTTA 229399 36 100.0 30 .................................... AAGCTTAAAATAAAGCTATCATCAAGCTTT 229465 36 100.0 30 .................................... TACTATAATTGAAAGCTGTCCTAAAGCATA 229531 36 100.0 30 .................................... TTTTACCAACAATAGCTTCTATGCTTACAG 229597 36 100.0 30 .................................... AGTTACAAGGTTAGCTAACAAAAAGCTTTA 229663 36 100.0 30 .................................... TGATACATTTTTTTAAAGTTTTATTTTGTT 229729 36 100.0 30 .................................... ACCTTGCATACTTTTTTGTAAGAAATTAAA 229795 36 100.0 30 .................................... GAGAATAAGGTTTTAGTAAAAAATTTTAAA 229861 36 100.0 29 .................................... TTTGTTTCGTCGATTAAAAGAGGATTTGT 229926 36 100.0 30 .................................... ACTTATGGACTTCACAGAAGATCGACTTGA 229992 36 100.0 30 .................................... TAAATATACATTATTTGTTTTACTAGTATT 230058 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 100.0 30 GTTTTAGCCACTTATTAAATTCTTTTATGCTAAAAT # Left flank : GTAATTACAGGTGTTGGATATATATTTGATATTAAAGAGAATGCAGGTGCAAGTATATATGAATTTAGTATTAAAGAGCCACCTAAAGCAGGAAAAGAAAAAGAATTTATTATAAAAGTATTGCAAGATAATAATTTAAAAATTCCAAAAAATACTGAAGTAAAAATTCAAAGAGGAAGCCCCACTATGGGTAGTATGAAGTATAGTGCCTCTATTGTTAAGAATAAACAAGGAGAGCCACAGGTTCGTGTAATAGATAGAGGATTATATGGAATCTTGCTTTTAATGCATAAAGCAAAAGGTGCTTATTACTTTGATATTATTGCTATTGGTTTTGCTATATCATTAATGCTTTTTTATCTATCTGGGCTTATTATGACCTCATTTTGTAAGCGAAAGAGAAAAGAGGCATTAATAGCATTTGGTTTAGGATTTATTCTAACATCTTTAGCAATTTACTTTAGTGTAGTTTAAGTGGTAAGCTAATTTGTATGATATTT # Right flank : TAGACTAGCTTAAAATAGCGTGTTTTAGGATATTTCAAGCGATTGTAGAGGTCGTAAATATTAAGAGGGTAGTTTTTTAAGAAAAACTAGGATATAATTCCTCTAAAGAATTTAATAAGTGGCTAAAATAAGGGAGTTTATCGGTCTCCCGCAGGTTTCTGTGTATAAACCCTTTAGGGCTTTACAACATACCCAGGGCATAAGATGCCCAACCGATTTTCTACTTTTTTCTACCTTAAATTTGATATGATATTTTCTATTTAATATGATTTTCTACTTTAATCTAAATATAGACTATCAAATTATACTTCCTATTTTTGTTAAGCCTTTTCTATCAAATTTTTTTGCAAACTTTTTTATTAAGATTCTTTTTATCAGGCAAGTTATTATCAATTTCCATTGATTATTATCAATGCTCTCCCATCAAATTGAAATATTTAATTTAAAGAGTTTTATATTGCTAATAAATTGATATTGATAAAAAAGATAGGGCATAAATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCCACTTATTAAATTCTTTTATGCTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //