Array 1 191352-195279 **** Predicted by CRISPRDetect 2.4 *** >NZ_SEJV01000002.1 Klebsiella pneumoniae strain ICR003209 ICR003209_S71_R1__paired__contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 191352 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 191411 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 191472 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 191533 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 191594 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 191655 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 191716 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 191777 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 191838 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 191899 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 191960 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 192021 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 192082 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 192143 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 192204 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 192265 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 192326 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 192387 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 192448 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 192509 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 192570 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 192631 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 192692 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 192753 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 192814 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 192875 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 192936 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 192997 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 193058 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 193119 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 193180 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 193241 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 193302 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 193363 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 193424 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 193485 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 193546 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 193607 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 193668 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 193729 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 193790 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 193851 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 193912 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 193973 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 194034 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 194095 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 194156 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 194217 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 194278 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 194339 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 194400 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 194461 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 194522 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 194583 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 194644 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 194705 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 194766 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 194827 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 194888 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 194949 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 195010 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 195071 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 195132 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 195193 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 195251 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //