Array 1 503-25 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFZ01000112.1 Flectobacillus sp. BAB-3569 BAB_3569_c497, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 502 37 100.0 35 ..................................... GTCCGCTAAGGGCTAGGCAAGCTGTTTTAGTTGGT 430 37 100.0 37 ..................................... TTGAAAAGAAAGTGCTGGGATTATTTCGAGAAATTAG 356 37 100.0 37 ..................................... CGGACGTTCATCCAGTGAACAAACTCATCCATCACTG 282 37 97.3 36 .C................................... TATTTTGGGTATTTTGATAATTGGTATAAGAAAAAA 209 37 100.0 39 ..................................... TGATAGTGAATTCTATAAGCTTGTGAAAATCCTTGTAGA 133 37 100.0 35 ..................................... GTATAGCCTCTGTCAAGGAAGCCATTGATAATGGA 61 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 7 37 99.6 37 CTTCCAGAGTAACTTCCAATAGAATAAGGATTGAAAC # Left flank : | # Right flank : CTCAATGATCACGACATTGAAGTAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGAGTAACTTCCAATAGAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [25.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : NA // Array 1 403-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFZ01000190.1 Flectobacillus sp. BAB-3569 BAB_3569_rep_c1191, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 402 37 100.0 37 ..................................... GGCTAACGCCATTCAATTCGAAATTTGGGGTAGAAAT 328 37 100.0 36 ..................................... GTCAGAACTTACATTCTAACTAAGAAAAAGGAAATT 255 37 100.0 36 ..................................... GTTTTTCGCATTTCGCTAATCCTCAAACATGCCAGG 182 37 100.0 36 ..................................... GTCCGCTAAGGGCTAGGCAAGCTGTTTTTAGTTGGT 109 37 100.0 37 ..................................... TTGAAAAGAAAGTGCTGGGATTATTTCGAGAAATTAG 35 35 94.6 0 ...................................-- | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 99.1 37 CTTCCAGAGTAACTTCCAATAGAATAAGGATTGAAAC # Left flank : TTA # Right flank : A # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGAGTAACTTCCAATAGAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 334150-334571 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFZ01000009.1 Flectobacillus sp. BAB-3569 BAB_3569_c9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 334150 30 100.0 37 .............................. TATTCGAGCTATTGTGAGAAACCAAACCAATGATTTT 334217 30 100.0 35 .............................. AAAGAATAATTACTACTTTTGATTTGAATAGGATC 334282 30 100.0 36 .............................. TTTTAGAACCATACCTTTTTTCAATTTCTTTTTGTA 334348 30 90.0 33 .C..............AC............ ACCAATTTTGATTCCGATTTTTTCCATATATTC 334411 30 76.7 35 .C...C......G...G........C..CT ATGAGCAACTTGATTCAGCAAATACGACTATTGAC 334476 30 86.7 36 .G.G...........CG............. AAATTATTTGAATCAATTCTTGTTACAAATTCGGGT 334542 30 76.7 0 ......T....GTT..A.........G..T | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 90.0 36 CTTTTAATCGTACCATTTAGGAATTGAAAC # Left flank : GAAATTAAAACATTGATTGATATGTATGTGATTTTGGTGTATGATATGGGAGAAAAGCGAGTAAGCAAAATGATGAAACATTGCCGAAAGTATTTAAACTGGATTCAAAATTCGGTATTTGAGGGGGAAATTACGGAGGTAAAATTGAAGGAATTAGAGATAGGTGCACGAAAAATCATGAACGAAAATGAAGATAGTTTGATTATCTTTAAGAGCAGGAATGAGCGTTGGCTTGACAAGCAAATAATAGGAGTAGAGCGTATGAGTACAGATAATTTTTTATGACGTATAATGATATACGCAAGTCGTCGAGTCTCATAAAGTTCATTGAAATCCTGAAATTTTATCAATCAAAGGGAGAGTTTTTGGAGTTAAGTTTCTGATAATCAATAGTCGTCGATGTACGGGGTAAATCCTATCATTACACATCGACGATTTTTTTCTAGTTTTTTCGAGGAAAAAAGTGTTATTTTATCAAATCAAGGCCATTTTTCAAACGG # Right flank : TAACATTCGTACGTTCATTTTGTGGATGCTCCACGAAGTCTTTAATCGTACTATTATAAATAGAATATTAAATGACTTTGAATTCTTTCAGAGTTATTTAGCGAAAAAGTACATAATGTGTTTGTTTGCTAACCGAACATTTAGCCTATTTGTATAATAAACAAATAGACAAACAGAATATGAAAGAACAGATTATTAAAGCACTTGAGGAGTCAAAAGAAAGTCTTTATAGGAGGCTAGAAGAGGAAATAAAAAAACTCTCTGATGACGAAATCAATAACTATCTAGACTCAATTCTGAAAATCAATCAAATGATTGAAGAACTCAAACTATAAAAAGGCGAAAGCCCAATTAAAGATAATGATAGAAATCTCTGGCGTTAAAACTGATGATCTTCTTAATCAAGCTAAAGAGCTAATTGAGAATGCAAAGAATTTTCTAATTTTAGAGGGGAAAATTATCGAATTAAGTGACTGGCTTACAATAAAAAACTATTGTAA # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:0, 3:3, 4:0.50, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGTACCATTTAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 13-774 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFZ01000044.1 Flectobacillus sp. BAB-3569 BAB_3569_c45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 13 37 100.0 35 ..................................... ATCAAATATTTTCCATATTTCTAAAAAAATAATAG 85 37 100.0 37 ..................................... CTGGAGAAAACCTAAAGCAAAGAGATAATGAATTAGA 159 37 100.0 37 ..................................... AGAGATTGACGTTACGTTAAGAACGAACCCTGCGAGA 233 37 100.0 38 ..................................... ACACTGAATCATCATTACCACAACCAACTGTAAGTTCT 308 37 100.0 36 ..................................... TAAAATGATGAAAGAGGGTGTTGTTACCTTCTTTAA 381 37 97.3 38 ......G.............................. GAAGAAAGAAAAGAAAGAACAACCTGATCCTGCTGATG 456 37 97.3 36 ......G.............................. TCAGCTCGTGAGGAAATTGAGCCACAATTGCTTGAT 529 37 94.6 36 .C....G.............................. CGAGTTTGAGTTGTTTTACCAGCTTCGATTGCAGAT 602 37 97.3 38 ..................A.................. GGTACTTTTCTGCAATATCAGCTGGTGCGTTCCATAAT 677 37 94.6 25 ......G...........T.................. AATGCCTCTTCTTGGTCGTAGAGTT Deletion [739] 739 36 81.1 0 T....TG......C....T.........A...-.... | ========== ====== ====== ====== ===================================== ====================================== ================== 11 37 96.6 36 CTTCCAAAGTAACTTCCAGTAGAATAAGGATTGAAAC # Left flank : GCAAGCAATGATC # Right flank : CCCTCCATTTCTGGTACAAGCTACCCACCCATCACAATGTAAAGTCACTTCAATTATTAATATAAATTATACTTGTACCGTTTATTAAAGTTTATTTTTAAATCTCATATTAAGTAAAAGGTACATATTGCTGTATTTTATTGCAGTGTAATTATTTTACACTAACCTTTTGTTCCTTTGTGAAAATTGATGAAGGTTAAGAAAAAATCTTGAAGGAAGGAATGGAATGAAATTTGTCAATGACCGTTTAATAAGATTTTTTAAAAATCCTGATTCAATACTTGTGAATCACAAATAAATCTTAAACATTGCGAGATGCACTTGCATTATTAACTCACCTCCCAATCACAACCTATCCAAATATGAGTTTGAAAATTCGATACCTAAAAATACAATTCGAAGCCTCTATTAAACCGTTCGAATTACCTGCCTTCCGTGGAGCTGTTATCAAATGTGCTGGTCGCGAGAACATCCATTTTCATAATCATCTCGGCGATGGT # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:0, 3:3, 4:0.83, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAAAGTAACTTCCAGTAGAATAAGGATTGAAAC # Alternate repeat : CTTCCAGAGTAACTTCCAGTAGAATAAGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [11.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 2 18572-20510 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFZ01000044.1 Flectobacillus sp. BAB-3569 BAB_3569_c45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 18572 37 100.0 43 ..................................... TCAACGAACATTTCGAATTGTGATGTTGTAATTTCCATAAGGG 18652 37 100.0 39 ..................................... CTCTTGATTCTTTTTCAGGATCTAAATCTCTACTAGTAG 18728 37 100.0 39 ..................................... TAATATACCCGTTACTTGCAGAATACAATTTTCCCAATA 18804 37 100.0 42 ..................................... TTTATAAAAGTTAAAGACCAAGTATAAAAATCAATACGATAA 18883 37 100.0 42 ..................................... CTCAGTATAATTAAAAGAGATTGTGATTAAACCTCTTTCTTT 18962 37 100.0 39 ..................................... TTCATAAGGGTAATTTGTTTAAAATGTTAAAAAGTTATA 19038 37 100.0 39 ..................................... CACCTTTAAAACCGAAATTTCTATACGCTGAAATCATGG 19114 37 100.0 37 ..................................... AAAAAATAATGAATATTTCTTTTTCCATAGGTTTATA 19188 37 100.0 42 ..................................... CTTTAAGAAGTTCTTCATCACTCTTATATTTTTTCAAATAAG 19267 37 97.3 39 ..................C.................. CAAATGTATTCATTCTTATTTTTTTCATAAATAAAAAAG 19343 35 91.9 39 .....--...........C.................. AGGTTCTTTGATAGTAGAACTAGAGTGTCTACCATTAAC 19417 37 97.3 39 ..................C.................. CTCAACCCGTCCGTAGTACGAAGCCCGTAAATAATTACT 19493 37 97.3 39 ..................C.................. TCATGGTATTGTTTGTTTAAAATCTGAGACTGAAAAGAT 19569 37 100.0 36 ..................................... AATCCAATTTTGTATTTTTTAACAGATGGGTTCGTT 19642 37 100.0 41 ..................................... AAGACGTGTAATCTATCAATCGATAAGACGAAAGACGTTAT 19720 37 100.0 40 ..................................... CTTACCTAAGAGTCACCGAAGGTCATTTAACGACTTACAA 19797 37 100.0 38 ..................................... TTAGCCTCTGTGTCTAAATTAACCGTTATCCTTGGAGT 19872 37 100.0 38 ..................................... TCGTTGCTGAATTTAATTTTTCTTTTCCGTATTTTTTA 19947 37 100.0 41 ..................................... ACTGTGAACACTTCTCTTCCTTTAGCCATATTGATATTTCT 20025 37 100.0 38 ..................................... TTCAAGGATTTTTGTTTCTTTGATAATTTCGCTTTGTT 20100 37 100.0 37 ..................................... AAAAACGGAAACCGTAAAACGATTCCCGTTTAATAAA 20174 37 100.0 35 ..................................... AGCCAATCCCAATCTCTTACATTTTCTTCTTCTTG 20246 37 97.3 41 ..................C.................. TTTCCTTGCTTGTTTTTCAGTTAGAAAAATTTCAAAACGGA 20324 37 91.9 36 .......TT.........C.................. TGATATTATATTGGTTTTACCCAACGTTAAAAGTTT 20397 37 94.6 39 ..................C................G. GTTTAGATTGTGGGGATGTCAACCCCACAATTGGCAAAT 20473 37 81.1 0 ..TTA......C....T.A.........C........ | C [20486] ========== ====== ====== ====== ===================================== =========================================== ================== 26 37 98.0 39 GTCAGAGCAGTACTTCCAGAAAAACAAGGATTAAGAC # Left flank : AGGTCAGCAAGGCAATCGTCGAACAGATTCTCAGATGATTACTCGACTTCGTAAAAATAACAATTGGCGTACCCAACTGGCACAAGCCAACGAAGGACTGATTCCTATCAAAAAGAGCTTCCCTCCTATTGTAGTACAAGTATTGGAAATTCAGCCAAAAAGTAAAGTACTCGACGAGCAGGACCTTTTAATAGCATTATGGAAAAAATGGATGAGCGAGACTAAGTTATCTCTACGACAGATTCAGCCAAGGGGAAATATTGATAAAATTACGGAGCTATTAGAGTGATATATCCCAAGAGAGCCAAGTAAAATGGGCTCTTTTTTTGTGTAGAAACGGGGCATAATAACCGTATAAATATGTATATTTGTAAAGTCTATATTGCTCTGTGACAACAAATTAGGAACATTTTCGATATAATAAATCAATGACAGAATATAAAATATCCAATATTTTTAATGTTAATACATTGATTATTAAAATGTTAGCTTAAGGGTCT # Right flank : CGCGTTGTCTGAATGAAGGAATGAAAAAATGAAGTACTTAGGGTGTGTGGTACTATTACAAAACATGAATTTTGATATTTCTTCGAGTGCATGAGTTTACGTTTTGAGTAAATACTGGAAGCGTAAATTAAACTTTGTTAAATGTTTTAGAATCCCCACTTCTTATATTTAATAGTTCTCTTTTACACCCTCCAAATTCCAAAATCAACTTCTTCCATTTGATATCCATCCCCATCATTTTCAAATCTTCAAATTCCATAATCTTCAAATGAACTAATTTTCAAATTAAAAAATCAGTGTAATTAGTTTACACTATCTCAGGCTACTTTTGTATCGAAATCAAACAGAAATAGCTTTCGATACAACTCAACTCATAATCAATCGCCGTGGGGCTTCGGTCTCTATTAACAATGGTAGGTTCTGTGTCAAACAGGCTGACCAAGTGATGTTTGCGCCTGTTTTCCAGATTAAGTCTATTCATTTGCACCCTGCTACGCATT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAGCAGTACTTCCAGAAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 3 25432-25770 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFZ01000044.1 Flectobacillus sp. BAB-3569 BAB_3569_c45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 25432 37 100.0 35 ..................................... TTGAAATTTAAAAGCCATTACATTAATTGAAGGCT 25504 37 100.0 38 ..................................... CCGTTTGGTGTCGGAATTTGACCTTTGATAATCTCTAA 25579 37 100.0 40 ..................................... AAGTTGGTTTAAAATTCATTGTTTATAAAGTTTAAAAATG 25656 37 100.0 40 ..................................... AGAGCTAAATCTAGTAATACCAGTTAAGTTATTACCATCT 25733 36 89.2 0 ...................-.........T..GG... | C,T [25761,25763] ========== ====== ====== ====== ===================================== ======================================== ================== 5 37 97.8 38 GTCAGAATGGTACTTCCACAAAAACAAGGATTAAGAC # Left flank : CAAGTGACAACAAAAAGGTGCATTGGGTACAAGCCTTGGCATTACCGCAAGGAACGCTTGCTAATTGGATGGAAAGCTATGAAGGTACGATAAAGTTCACAAAAGGAGGTTTTGGTTTTGTTGATAATATATACATAGCTAGCCAGCTTTTGAAGGAACGGAACATAACGCAAGTACAAACTGTAAAAGGCACAGCGGTAAAGGTGTATGATCCTGTAAAAAAGCAACTCGGCAAAAAGGCTCTAACAGTAGAGATATGCTAGCGTATAGTTGGGTCGTGGTGATTGTGTAATCGGTACTTGAAAAGGTACCGATTTTTTATTTTTTAAAGCCTAGCATAGCCTTAGAACTTAGGATAAAGTTTTGTATTTTTGAAAAGTCTATATCGCTCTGACAAAAATTAGGAACATTTTCGATATAATAAATCAATGATACGATATGAAATTTCAAATATTTTTAGTATTAATACATTGATTAATAAGATATTAGTAAATGGGTCT # Right flank : CAGCAATAATGATTTAGTAAAGTGCTGTATCTGCCATCAGGTCAATCCAATCAATGTTGGTTATTGGTTTTGCGAGGCTAATATAGTGCCATTGGCTCTTGTGGCCGAAATAGCACAGTAATATTGCTTACAAAATGGTTTTACGGCAGCCCAATATAGTTGGGTACTTAATCTCTGGACAGCACCACTGTTTTAAGTATATACACTCATTTACCAATGTAATAGAGATAGTTCGTTTAAACTTAAATCGCAGTATATCAACCAGCGAGTATATAATTTGGAGTATCGCCAAATACAGTTGCAGTAGGTATAGCACAGGATGAAAATGAAAAGAGAAAGTACGCCAGCAATTACAAGAAATTGAAGCATTACAAACCTAAATTGACGAACCCATCGCTGAAGGCTACGACTCTAAACTGGACGATGGTGTTGACAAAAACATTACTCCACTGCAAAATCACAACTGGAGAAATACCAATTGACAGCAGGCAAAGTTTTTT # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAATGGTACTTCCACAAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 4 44114-45697 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFZ01000044.1 Flectobacillus sp. BAB-3569 BAB_3569_c45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 44114 37 100.0 36 ..................................... GATACTGATGAAGTAGTTTGAAATATCTCCTTTGCT 44187 37 100.0 37 ..................................... AGTGTTATATTTGTAATGTCAATCAGGTGATTGACTT 44261 37 100.0 36 ..................................... CATACTCAGCATTGTAATAGTCGCTCGATACCCAGT 44334 37 100.0 37 ..................................... TATTCGTGCTCAAAAGCAATTGCGTTTTGTTGGTACT 44408 37 100.0 37 ..................................... GGTTGCTATAATCCGAATTTTGTGTGATATATAAATT 44482 37 100.0 36 ..................................... CAAAACATTGAAAGTCTCTTTCTAAAGAAATAGCAA 44555 37 100.0 36 ..................................... GTTTGTTGTGGCATTTCTAATGGATTCCATTCTAGC 44628 37 100.0 37 ..................................... CGCTCAGTACATCCCTTACAAGCTTTTCATAGAACTT 44702 37 100.0 36 ..................................... TTGTGGGTATGTTGCCAACAAATTCAATAGACTCTA 44775 37 100.0 36 ..................................... ATAATTAGACCTTTGCTAGCTGAAAGTGCATGCCAT 44848 37 100.0 36 ..................................... AGGTAGTTTTCCCAAGCTGAAGCTTGGTATTGCATT 44921 37 100.0 37 ..................................... TCTCGTAAGCAAAGATACCAGTCGGGAAACCTTGCTT 44995 37 100.0 37 ..................................... GGCATCAATGATATCTCTTACAATGCTATTAATCAAG 45069 37 100.0 36 ..................................... GTGACTTTGGTATATTGGCCATACAATGCGTGTTGT 45142 37 100.0 36 ..................................... TGAAAAATCAATCAACTTCTGAAAAGTTGGAGGTAA 45215 37 100.0 40 ..................................... TCAAAATAGATCAGCAGCTAAAGGGTATTTGGACATCCAA 45292 37 100.0 36 ..................................... CACTCGAAAATGTGATGAATATGTGAAGTCTCATAT 45365 37 100.0 37 ..................................... ATTTGCAAATATTACGATAAATCGTAACCTTTGTAAT 45439 37 100.0 38 ..................................... TCTAGATATGAAGAAATTGAATCATTTTGTAAACTTAT 45514 37 100.0 37 ..................................... GGCTAACGCCATTCAATTCGAAATTTGGGGTAGAAAT 45588 37 100.0 36 ..................................... GTCAGAACTTACATTCTAACTAAGAAAAAGGAAATT 45661 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 22 37 100.0 37 CTTCCAGAGTAACTTCCAATAGAATAAGGATTGAAAC # Left flank : ACCCTTAGACTATAAATTTGCAGCTTATGACGACAAAGTTTTTGATACTTACAAAACCCAATTGTATTGTTATGCTTGGTTGATAGAAGAGAACTTTCATTGCAGAGTCAACAAGGGCTATTTGGTATATACACGGAGCAATAATAAATTGGTAGAAGTAGAAATAAAAGATAGCGACAAACATTTAGTAAAAGAGGCAAGTCGAGAAATTTATCAGATTATAGAGAACAATTATTATCCAAAAGCTACCAAATCTAAAATGCGATGCGTAACTTGCACTTATAGAAATATTTGCACGAAGTAATCAATTTCCGAGTTGTAATTTATTTTTAAAAGATAAAAATAAGGCTTTAAGATATTTTAAATCAATTAGTTATGTTTACGGAAAAAATCAAAAAACAAACTAAAAAACGTACATTGACCTACTGTTTAGAACATAAAAGGGAAATCGAAAATAACATACAAGTATTTATGTTACAAGGAATTAGCCAATCAGGCGC # Right flank : GTTTTTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGAGTAACTTCCAATAGAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA // Array 1 17-9487 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJFZ01000109.1 Flectobacillus sp. BAB-3569 BAB_3569_c481, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 17 37 100.0 39 ..................................... TGATAGTGAATTCTATAAGCTTGTGAAAATCCTTGTAGA 93 37 100.0 35 ..................................... GTATAGCCTCTGTCAAGGAAGCCATTGATAATGGA 165 37 100.0 38 ..................................... TCAATGATCACGACATTGAAGTACCAATCCCTAAAGTA 240 37 100.0 38 ..................................... AGGTATTGTGGCTCTCTCGCCCAATTGACATTATTTTT 315 37 100.0 36 ..................................... ATTTGTGGAATATCCTGTTCTTCGATTTTCTCAATT 388 37 100.0 35 ..................................... CGGTATTAATATCATCATAGATTGATACCCCAAAT 460 37 100.0 37 ..................................... TACCGAACAATACAAAACAATACAACATAATACAAAA 534 37 100.0 36 ..................................... TGCTCTTATAGTGTTCTACTCCCACTATCAAGGCAT 607 37 100.0 36 ..................................... CCCATTACACTTAGTATGCCGTCCCAGTTGTACGAT 680 37 100.0 36 ..................................... CTCTTACTGTGGTCTTTAGGGTTCCGTTGTGGCTCT 753 37 100.0 37 ..................................... TAGAAACAGCCTTCCAAATAAGCAATATTACAGGCTA 827 37 100.0 37 ..................................... AGATGGTGAACTACAAAGCTTATCTCGTCCTGATCTA 901 37 100.0 37 ..................................... GTAAGAATATAGCTAAATACTCTAATTGAAGGTTTAG 975 37 100.0 36 ..................................... CAAGTAGAGGCTATAAATTCACAATAGATAGTTAAG 1048 37 100.0 36 ..................................... ATCACCATTTTATTTTTGGCGTTTCTTCAGGATGGA 1121 37 100.0 36 ..................................... GTGCAATACCTGAAATACTAGAAATGCCTTTGACGC 1194 37 100.0 36 ..................................... ACACATTGAAGCCTTTTGATTCAACGGCGGCTGCAT 1267 37 100.0 36 ..................................... CTTTTCGAGCGAGCGCCAGCGCCAGCCCTTTCTCTT 1340 37 100.0 39 ..................................... AGCTTAATATTCACCTCATTAATGCCGAGCAATTCTTTC 1416 37 100.0 38 ..................................... TACTTGTAGTCCCTCATTGTGTTGTGAGCCAAATTCTC 1491 37 100.0 36 ..................................... GATGGAAAATCTTGGTTTGGGGCGTTAAATAAAAGG 1564 37 100.0 37 ..................................... CGGGAATTCGAGAAACGGCAGGCAGAAAATATTTTAA 1638 37 100.0 36 ..................................... TGCGATCAAGTACGTGGTAATATCTGGCCAAAATGA 1711 37 100.0 36 ..................................... TGCAATTTCCATTCGTTTCTGCCATTACCAATAGGT 1784 37 100.0 36 ..................................... GTGCGTACATCAATCCGTTTTGCAAAACCCTGAACG 1857 37 100.0 37 ..................................... GTTGTGATTGATAGTTACGTTAGTGTTCGGCTTTGAC 1931 37 100.0 37 ..................................... GTGAGGTATTTGAAATTTTTGGTTTTCGATTGTATGG 2005 37 100.0 39 ..................................... TAGTCAGCGTAGTTACGACAAAGAAACAGTTCGTACCAT 2081 37 100.0 37 ..................................... CAGGAGTATATAGTTTCAGTAGTGAGCGTACGCCCAA 2155 37 100.0 38 ..................................... CCACAATGGCTCACAAAATAAAAAGCGCTGCCATTTTT 2230 37 100.0 37 ..................................... ACAGCTGTACCAGACATACAAACCATTAACATTGCTT 2304 37 100.0 39 ..................................... TTCAGAGCCTATAAATGTTTCAAGAAATGAGATACCAAT 2380 37 100.0 36 ..................................... ATTTGCTTATTCAAAACATTGATATTGTTGGTAAAA 2453 37 100.0 37 ..................................... CCACCCATCGTCATTCGATAGTCGAAACCATCACTAT 2527 37 100.0 36 ..................................... TGCCTCATGCCTATGTGAGCACGAAGCGACTGGAGA 2600 37 100.0 38 ..................................... ATTGCTTTTTTGTGATTTTCATTTCTTGAGCATTTTCT 2675 37 100.0 37 ..................................... TGATTAACTCCTCGTTTCGAAGACTCCAGATAAATTG 2749 37 100.0 36 ..................................... AAACAGACGGTTCAGACTTGCCTGCTGACTTTGGCA 2822 37 100.0 36 ..................................... ATACACCTAAATTCAACTCGTAATTATCAATATGGT 2895 37 100.0 35 ..................................... CTTTTGCCCTTGAACCTGATACTCTCCTTCGTTGA 2967 37 100.0 36 ..................................... CTAACTCCTGCTCTGATTCAGTTTCTATCATGTCCT 3040 37 100.0 36 ..................................... ATAGTAACTAGAAACCAAGCTCAATGCTGACTGAGT 3113 37 100.0 36 ..................................... TTTTCTTTGCCTTTCCTGAGATAATTGGCAAAGCAT 3186 37 100.0 37 ..................................... GTCTCAGGGTAGTTTCCATGAGTTGTTCAACCTCAAA 3260 37 100.0 36 ..................................... TTGTTTCCAGAACCGTCCCCCGTGAAATAAATTGAG 3333 37 100.0 37 ..................................... GTTTTTTTCCATTACAGAATTTGATTATCTTTGATGT 3407 37 100.0 40 ..................................... TATCCATCAATTGCCATCCATTCCATTACTTTTTCAAAAA 3484 37 100.0 37 ..................................... ACAATTAAATGGTAAGCTATGACAAGAACAGTAAACA 3558 37 100.0 36 ..................................... CGGTAGTACAACGCATAGTTACCGCCATAATAATAT 3631 37 100.0 36 ..................................... ATCCATAAGGTGTCGAGGCTGCCAATTGAGCAATCT 3704 37 100.0 37 ..................................... TGAATGCAATACAATAGGCTGCATCATTGGTCATTGC 3778 37 100.0 35 ..................................... CATAAACGCAGAAAAAATAAAAGCCTAGAATTATT 3850 37 100.0 37 ..................................... AACTTTGGCATTGCAAGTACGGACTCTAGCAATACGT 3924 37 100.0 36 ..................................... ATAGTCATGTTGGGTCTGGAAGTATTCGGATAGCTT 3997 37 100.0 37 ..................................... GGACTCATTTGGTTTTTCTGGAGATACAAAAACATAA 4071 37 100.0 37 ..................................... GAAAAAGGATAAGTATAAAGGCTACTTAATGAGGTAT 4145 37 100.0 38 ..................................... GAATCTAATATGTCATTCCAGTATTCAAACCTTAATCT 4220 37 100.0 38 ..................................... CACTTGTCAATCGGGACGCTATGGATATTGCTAGTACA 4295 37 100.0 37 ..................................... TTCTTCAATTCTTGCCTTTTCCTCTGCGTCCTTTTTA 4369 37 100.0 37 ..................................... TAAAGGTAAATTCCAGTATCCTCAGTTATCCTATTTG 4443 37 100.0 36 ..................................... CAAAACGTAAACTACCAACCACTATGGGGGCAATGT 4516 37 100.0 36 ..................................... ATTCAATTGGAAACTTAATGGCAGCAAAATACAGTC 4589 37 100.0 36 ..................................... TTTTGAACGTCGGTCATTGCCTTGGCAATCAAAGGG 4662 37 100.0 36 ..................................... CATAGAGCAGCATTGATAGGAGGCATAAGCGTCGTT 4735 37 100.0 36 ..................................... GCTCACCATCTTGAGGCGCAAATACACCTGTTGATA 4808 37 100.0 37 ..................................... CGCAAAGAAAAAAGGGTTTTGATTATCAGTTGCCTAG 4882 37 100.0 37 ..................................... AACACAATCTTAGGTCTCCCTTCAGTCGAAATCAGTA 4956 37 100.0 35 ..................................... GGGTTCGACTTGGACAATGTAACCGCAATAGTTAC 5028 37 100.0 37 ..................................... AGTGATTTATTCGTAACGGTTGAATCTACTTCTATTT 5102 37 100.0 37 ..................................... ACAGATTCTGTAAAACCTTGTACTCAAGGACTTAAAG 5176 37 97.3 37 ...................................G. TAGCAATGTGTCTTGAGAGCATCTCGATTAAAGTCTT 5250 37 100.0 36 ..................................... TTTGAAGGTGCAGAAACCTCAAAAATATAGTCGTTT 5323 37 100.0 38 ..................................... AAGAGAAAAACGTAGTATTTGGCGAAGGACAGCCAGAA 5398 37 100.0 37 ..................................... AACCCCAAATCCAATAACCAACAAAATGAACGACTAT 5472 37 100.0 36 ..................................... TTTTTATGACTAACGAAGACAAAATCCAACAGTACA 5545 37 100.0 36 ..................................... GATAAGGTTCGTCTTCGTGGCGCAACACTTTCATCG 5618 37 100.0 38 ..................................... AGGAAAATGAAGGTGAAATATGTTTTTCTGAATCTGAT 5693 37 100.0 39 ..................................... TACCACTCTTACCACTCATTCACATTCTTATTGATTATC 5769 37 100.0 36 ..................................... GCAAATCAAACAATTACAAAAACAGAGCGTATTAGA 5842 37 100.0 37 ..................................... AATTTTTTCGACGTATTTGTATTTGATTAAATCATCT 5916 37 100.0 37 ..................................... ATAAAGGCTTTCTGAGGAGTATTAGAAAGCCTTTTGT 5990 37 100.0 38 ..................................... TTTGAGCCGATAAACTTGTGAATTTCCTGCATTTCAAT 6065 37 100.0 36 ..................................... CAACAAGAAATCAAATGCACGCAGACTTACAAGGAA 6138 37 100.0 36 ..................................... GGCTGAATCCTACGTTCCAAAAATCCCTAGCGCCTT 6211 37 100.0 37 ..................................... TGCACTACTTCGATATCGAGTTCACCGTCTTCGTCTC 6285 37 100.0 36 ..................................... AAACTCAAAACAATAATTACATGGAGCAAATTCAAA 6358 37 100.0 37 ..................................... ACCAACAGTAAGAGCAGTGTCATATTCTGTCCTTAAC 6432 37 100.0 36 ..................................... GAAAATATCGCAAGCCAAATCCCTACGCTTCAAGCT 6505 37 100.0 37 ..................................... AGGAAAGTGGTTTTGTTGGTTTCCAAAAAAATGAAAT 6579 37 100.0 36 ..................................... CCATGTGGTCCATATTAGGTAATGTAGTTATGGGCT 6652 37 100.0 37 ..................................... GAGCTTCAATACGCTTTTGTTCGGTGTCAAGTACCCA 6726 37 100.0 36 ..................................... CATTAAATCCCCTATCCTGTAATTCATCAAATAGCT 6799 37 100.0 39 ..................................... ATTCAAATGTTGGATGTGATAAAGGCTGACATTGATGCT 6875 37 100.0 35 ..................................... GAGCTTCAATACGCTTTTGTTCGGTGTCAAGTACC 6947 37 100.0 37 ..................................... ATCGCATTGAGAAACAAATTCAAGACTTTGGGTCTCA 7021 37 100.0 37 ..................................... TGGACATCAAATACAAGTGCATTTGTAGGATTTTTTT 7095 37 100.0 35 ..................................... GAAATTGTACCAAGGAACTTAGCAAAGCTAAACCT 7167 37 100.0 36 ..................................... TCAGGAAGTCGAACACATTGATTTGTTCTGGGTATC 7240 37 100.0 37 ..................................... TCAAAAATGTTTTTCCCTGTTTTGATATTTTTTTTCT 7314 37 100.0 42 ..................................... TTCAACAAAAACGCGCCAAAGATACAATTTGTAGTCGGTCAA 7393 37 100.0 36 ..................................... GTATTGGACATTACCCAAGCTGACGCCATTCCGCTT 7466 37 100.0 36 ..................................... TCGCATGATCTTCTCAAGGCTTTGAGGTATGGCCCG 7539 37 100.0 36 ..................................... ATTATAACATGCCCGTAATTTTTAATCGAGAAAAAT 7612 37 100.0 36 ..................................... CATCATCAATCAGGAAGAGGTTGTTAAGCCAAGTAC 7685 37 100.0 37 ..................................... CACCTCACAAGGGTATAAAATCTCCGTTGAAGTTCCT 7759 37 100.0 36 ..................................... ATGTAGCTAGCTGCTGAAGAATACAGTACGCTTTTG 7832 37 100.0 38 ..................................... CTGCATCGTCCTGAGTAGCAAAGTTTTTAAAATAATTT 7907 37 100.0 35 ..................................... TGTATAGAATAGGGTTCTTTTTGCCGTAGTGCTGT 7979 37 100.0 35 ..................................... CACTTGCTGTAGTTGAACCTGAATTAAGTGTGAAT 8051 37 100.0 36 ..................................... CCCCCGACGACGAAATTAACGAACCCGCTTGCGTGG 8124 37 100.0 36 ..................................... TTCCTTAACATATCGGAAGATTGGCGACTAATTAGC 8197 37 100.0 36 ..................................... CAAATGAGTTTGCGTCTGCAGGATTACTAGAAACTT 8270 37 100.0 36 ..................................... GCGATGCCGGCAAGAAACGAGGAACAGAGGACGAGC 8343 37 100.0 39 ..................................... ATCTCATATATCCCTGAATTATCTGTAGATACCTTACAG 8419 37 100.0 36 ..................................... TCTTCAAGTTGTTCTTTGTACTTATCAAACTGATCC 8492 37 100.0 36 ..................................... CTGGGTCATCATCATTGATGTTTCCAACTACATGAG 8565 37 100.0 37 ..................................... TCGTAGCCTTTATTTTCGGGGGTGTTTTCTTGCCCTT 8639 37 100.0 39 ..................................... CAGGATTTTGCGGGATCACCAAGTAGGGTATTAACTCCT 8715 37 100.0 36 ..................................... TACGTTTCTTCTAGCTTCTTTTGTGCTTTCTCCTCA 8788 37 100.0 38 ..................................... CAGACATAGGTCGTAAGACCAATACATTACAGCAGACT 8863 37 100.0 37 ..................................... GTTTGTGGTTGTTGCCCAAACAAAAACTCTTCCATCT 8937 37 100.0 37 ..................................... TTTCCAAAATCGCCTAAAAAATTACAGAAACTGACGA 9011 37 100.0 36 ..................................... GGAGGTGCATCAGGAACAACATTCACTGGAAGTAGT 9084 37 100.0 37 ..................................... AATAGATGGAGAGCCATACACTCAGATAGGAACTATA 9158 37 100.0 36 ..................................... AGTATAGAGTTTTTGCCTACGACAAATACAGTTATG 9231 37 100.0 36 ..................................... GAGGCAAATCATTTTCGATACCACAAATAGATGACA 9304 37 94.6 37 ......A...........G.................. AGCAGGCACGGTAGCAAGCACGTAAGCAAGCAATGAT 9378 37 94.6 36 ......A...........G.................. ATCAAATATTTTCCATATTTCTAAAAAAAATAATAG 9451 37 94.6 0 ......A...........G.................. | ========== ====== ====== ====== ===================================== ========================================== ================== 129 37 99.9 37 CTTCCAGAGTAACTTCCAATAGAATAAGGATTGAAAC # Left flank : ATTGGTATAAGAAAAAC # Right flank : CTGGAGAAAACCTAAAGCAAAGAGATAATGAATTAGACTTCCAAAGTAACTTCCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGAGTAACTTCCAATAGAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA //