Array 1 199783-200471 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR881461.1 Halomonas sp. I3 isolate Halomonas sp. I3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 199783 28 100.0 32 ............................ GCCAACGCCGCGCAGTCGGAGGTAAAGGGCCA 199843 28 100.0 32 ............................ GCCCAGAACAACCGTGCCGAACTCGACGTCTT 199903 28 100.0 32 ............................ TGAATGAACTCACAATGCCTGGAACCTATTTT 199963 28 100.0 32 ............................ AATAACGAGTTCACCTGGAAAGAAGTCAACGG 200023 28 100.0 32 ............................ GTAAATCGCTGGGCATGTTCTGCAGCGTGTAC 200083 28 100.0 32 ............................ AAGTGCCGTAACGGGCACGGTAAGCACAGGCG 200143 28 100.0 32 ............................ TTATCCGCTGGCTCTTGGGGGAGAAGAAGCGC 200203 28 100.0 32 ............................ AGCACGAGATCGCGCACTGTTTGGGTATCCGG 200263 28 100.0 32 ............................ GTGCCAAACGTCGTCAGCCGATAGGCAAACCC 200323 28 89.3 32 ..T........TG............... TGGCGGCCTGACTGCATTTGCACGCTGCCCGC 200383 28 89.3 33 ..T........TG............... ATTCTGATGGATGCTTGGCACCCTTGCTTAGGT 200444 28 89.3 0 ...T........T........C...... | ========== ====== ====== ====== ============================ ================================= ================== 12 28 97.3 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CACGGCTGGGGCAATTGATGGGCGCTGACTGGCTAACCGGCATGCGTGATCACACCCAAGTCAGCGAGGTGCTTGCCGTGCCCGCCAATTCTCAGCACTTCAACGTGGCGCGCAAGCAGTTCAATACGGGCAGCCCAAGCCGTGCCAAACGCTATGCCAAGCGGCATGACATTTCGGAAGATGAAGCGCAGCAGATTTATGCCAAGCTAGCGGCGCGGCGCATTGAGCTACCCTTCGTGCAAATAAACAGCCGCTCCACCCAGCAGCGCTTTAGCCTGTTTATTGAACACGGCAAGCCTCAGGAAAAACCGGTGGCGGGTTCGTTTAATCACTATGGCTTAAGCCCTGACGCCACAGTGCCGTGGTTTTGACCCTTTTTTCTAACATGAAAATAGGCGACCAATAATCAATCACTTAGCGGTGTCGCTCGAAAAAGGGTGATACCGCTTTTTTTGGCTAAAGCTCTTTAACAATCAGCACATTAATTTTGATATGCTCTA # Right flank : AGCTCCAAAAAACTCAAGGTAATGCGGGATATTGAGTTTATTGCTGGCTCAGTATCGTACTTCATCCCTGAATAGCTGAACCTTTTATTAATTAAAATTGATAGCATAGGAGCATTCTTTAAAAGGAATTTCCACTTATGCACTCGTTGAATAAAGCCATTGTTCTCGCCGCCGCGATTACTCTGGCGCCTCCTATACTGGGTCAGCCAGTGAAGGCAGGAACCGAGGCCTATAACAATGGTGATTACGCCACCGCTCTGAAGTATTTGGAGCCGTTGGCTGAACAAGGCGATGCCGACGCGCAGTACACTCTTGGCGTCATGTACGACCTCGGCGAGGGAGTCACCCAGAACGCCTCAACAGCCGCCGAGTGGTACCGAAAAGCCGCCGAACAGGGCGATGCCGACGCGCAGCTAAGTCTTGGCCTCATGTATGAATACGGCGAAGGAGTTCCCCAGAGCACCTCAACGGCCGCTGAGTGGTATCGCTGGGCCGCTGAG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1936548-1936995 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR881461.1 Halomonas sp. I3 isolate Halomonas sp. I3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1936548 28 96.4 32 ........T................... CGGTGCAGATTCAAGCCGAAAGCCGAGCAGGC 1936608 28 96.4 32 ........T................... CGCTCGATGGCGGGCTAGGGAGTTAAACGTAT 1936668 28 96.4 32 ........T................... AAATGCTACCCGTGCGCAGCATGACCACCTGG 1936728 28 100.0 32 ............................ CGCGGCGAATTGTGGGACACGTTTATCGATGC 1936788 28 100.0 32 ............................ ATGGTACGCAGTGAGTCTTTTACCCATAGCGG 1936848 28 100.0 32 ............................ CGCGAGAGGAGGTGAATAAATCGATCCGGTTG 1936908 28 100.0 32 ............................ TTGGAGACGATTGTTAAACAGCAGCCAGTTTC 1936968 28 92.9 0 ........................T.T. | ========== ====== ====== ====== ============================ ================================ ================== 8 28 97.8 32 GTGAACCGCCGCATAGGCAGCTGAAAAT # Left flank : ATATAGCTGACGAAGGATTTATTGAAGTTAGTGGTGTTAAAATGGTTCCATCCACATTAGAGGAAGTGAGGTTTATTAGAAACCAGCATATTGCTAAGTCTTTTCCGGGCGAAATTAAGAGAAGATTGGCCCGTGGCAAAAAGCGGGCTGAAAAACGTGGTGAGACGTTCATGCCTATTAGCGTTGTATCAGATCGTTTGGTTGATCACTGCCACGTAATTCCTATTGATAGCCGCTCGTCAGGCCAACGCTTTCCGCTGTATGTCCAGCTTGAGGCACTCAGCGAAGAAAGCAAGCATGATAGCTACAATAGCTACGGCTTGGCTACACAACACTCGCATACTGGCTCTGTTCCAAATCTTAAACATATTACCTAAATATTTATAGAATATATATTGTATTACTTATCAATGTCTTATCTCTTATACGCCAAGAAGGGTATTTTTACCATTTTGTGTTTATCTCGTTGATATCTATATTTTAAGTACTAACTACGTCTA # Right flank : TAGGACTGGAAGCCAGCAACGGTAATGATACACACCGCCGCAATGGCAGTAATTGTTCTAAAACCTCCAATTTTACTTGGAGGTTTTTTTATAGTGAGCCTGGGATAGCGCGCAGCGCCCAATGAGGGGGTCATGAGGGTGTCCTCTGTGGGATTGAGGGCGGATGGTAGGGCTGTCGTAAGAACTTTTCCTACAACCATCGCTCGCCATGACATCTCCAGCAATGACACCTTCCGCCACCTAGGATTGATGCCTACTATGACCTTTTTGCAACTTCATGTCTCGCTTTTCCGAGTAAATGAAAAATGTTTTTACCGCCCCCTGTGGCGCCCTTCAGTACTTAATTCAACGCAAGAAATGAGGCATGGATCTTAAATAAATACACAGGAGGTGCGCTCAGTTTCTGCGGCAAAAAAGCAGATAATCTTAATGTATATTTATGACGTGATTTTATTACAGAAGCAAACGTTCGTTTTATTTTATGTCATCTAAAAATGGAA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAACCGCCGCATAGGCAGCTGAAAAT # Alternate repeat : GTGAACCGTCGCATAGGCAGCTGAAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //