Array 1 40-1146 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEWS01000002.1 Ignatzschineria cameli strain UAE-HKU61 NODE_2_length_416691_cov_225.270895, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 40 28 100.0 32 ............................ TTCGCCGTCAACCAATACAGATACCTGGCTAC 100 28 100.0 32 ............................ GTACGGGCTTAAATTTAGCCAATCATTTGAGC 160 28 100.0 32 ............................ TAATAGCAATCAATTCTTATCTCCTCTCGATC 220 28 100.0 32 ............................ AACGCTTGATGACTTGGTGTGTGGGTAATGCG 280 28 100.0 32 ............................ TTCGCCGTCAACCAATACAGATACCTGGCTAC 340 28 100.0 32 ............................ ATGTGAACCACAGCTCGCTGTCGGCCTTTCTG 400 28 100.0 32 ............................ ACCATTCATTAGATACAATCGTTACCGTATAA 460 28 100.0 32 ............................ TAACTAATATCGAGAAGATCGAAGGCGGTAGT 520 28 100.0 32 ............................ TCATCGAATGACTTAATAAAATCTATCCCATC 580 28 100.0 32 ............................ AAACTTTCCTGAGCCGGCAACTCTCGGCGATA 640 28 100.0 32 ............................ ACGTACGCCGGCGCAACCGAGCGATGGCCGCC 700 28 100.0 32 ............................ CACGTATCACAAGAGAAGACATCTTCATTGCC 760 28 96.4 32 .............T.............. AAAAGAAAGTTAAGAATTGATACAGCAGAATC 820 28 96.4 32 .............T.............. TTGCGGATAAAACTTCCGCGGTTGTAGAAGAG 880 28 100.0 32 ............................ ATATTAGGGTCGGCTAACTTCAATATAAATTT 940 28 100.0 32 ............................ TATTATCTTTCTCACTACTAAAGAGTCTCCAA 1000 28 96.4 32 ..................A......... AATTCCTGATTCTGTAGCTGTAGAGCGTTGAC 1060 28 85.7 32 ...CG.T...........A......... TTTGGCGGGTAGGGCTTTTCGCCTTTCCCTTC 1120 27 71.4 0 ...CG.T.T.........A.T...-..G | ========== ====== ====== ====== ============================ ================================ ================== 19 28 97.2 32 GTTAACCGCCGCACAGGCGGCTTAGAAA # Left flank : TTAGAAAAACGCTTGATGACTTGGTGTGTGGGTAATGCGG # Right flank : GTTTCGGCGGAAAAGGAGTCCGTCGATGCTTTGGTACAGTAGCATTTGGGGCAAGTAGATAGAAAAAAGGCCGTTAATATAACGGCCTTCTTTTTAGGTTTAATCTGATATTTTTTATCAGAGATCAAGTCTTAATCAGCAATTAAATGATTAATGCTTGATTAGAATGGAGCGTCGATATCGACAACATCAACGAGTTTGATATTAACGAACTCTTTAAGACCTAAGTCGATCAATTCACGACCATATCCTGAACGGCGGATACCACCGAATGGGAGATCTGCTTTAACCATGGTTGGGTGGTTAACAAATACCATTCCTGTTGAGATTTGGTTTGCAACACGACGGCCACGCTCATTATCTGAAGTGAATACTGATCCACCTAAACCAAATGGTGAGTCATTAGCAATGCGAATCGCATCAGCTTCATCTTCTGCTTTAATGATCATCGATACAGGACCGAAGAACTCTTGGTAGTATGCTGGGTTATCAGGCGTTAC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCGCCGCACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 35424-34916 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEWS01000003.1 Ignatzschineria cameli strain UAE-HKU61 NODE_3_length_257155_cov_225.434015, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 35423 28 96.4 32 A........................... CTAAGCGGTGTAAGGATTAATGATTTAAAAGA 35363 28 96.4 32 A........................... TGTATCTACAATTGCGCATCTCTTTAAAGCAT 35303 28 100.0 32 ............................ TTATTTTTAGCGCCACCCATCACCCCAACTCT 35243 28 100.0 32 ............................ TTGGAAGTTAAAATCCCCGCTTTCAGACTGAA 35183 28 100.0 32 ............................ TATTATCGCCGCTCCCAATACAGGGAGAAGCT 35123 28 100.0 32 ............................ TGTTTCTTGACTGTGAATCTATTGTAGCTAAT 35063 28 100.0 32 ............................ TGAAGGAGACTCAACATCATCAAAGCCGGCTT 35003 28 100.0 32 ............................ AAATTTGAACGATTTAACTTTTTAGGTAGTTA 34943 28 96.4 0 .........................G.. | ========== ====== ====== ====== ============================ ================================ ================== 9 28 98.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TCTCTTCAGGACAGCCAATCATCACCCATATTGCCTTAAAGCCAACCTCAAGCTTACGTCTCGAAGGTCGCACTGTCGATACTGAGGGAAATGAGACTTCGGTCATTACCAAAGGTCGACACGATCCTTGTGTTGGAATCCGTGCAACACCCATTGCTGAAGCAATGTTAGCGATCACTCTACTCGATCATGCCCTTCGCCATCGCGGACAAACAGGAAGATAATACTCTTCTTAAAATCACTTGATGGACAATTGAAAATCAATTAGGCTTCAATAGAAGCAGATATTCATTCACCATCTAAAAAAAATTATAAAAGTAACTATACAAAAAAGGATTAATCTGCTTATCGCTTACTCATCCTTTTTTAACCTTTATTTTAAGCTCTTTAAAAAATTAAACTAAAATCAATGAGTTAGATAAAAGAGGAAAATAATAGGTTTTAAGGAGCAAACAACCCTAAACTTCGATTTTTCCTCTCTTTTAACGTTTTAACTCACT # Right flank : TATTTTCCTCTGGAAGGAACTATTCACTATTCAATTGCTATTCACCGCCACATAAGTGGCTTGAAGATATTAGATAATCAAGTAGGATTAATTAATTTCAAATAGATAAATTTCAAATAGATAAACTTCTCTATAAAAATAAAAAAGATCCTAAAATCAATCTCTAATAGATCTCTAATATAGTATTAATGCCCTAATAATCATAAGGCTGATAGAATCGGGATATTGACCTCATGAGTTCATTACTCTAAGGTGAAAGAGATAATATTATAGGGATAGAGAGAAATGATCAGAAACTTCAAGATTCGCAGCCTCTTTTTAATGCTTCTTCTACTCTTTTCGATGGGACTTTCCCCTTTAATGGCGGAAGATACACCGATCGAAGAGCGTACCGAAAAACTCAATGATATTGAATTAAAACTTGAGGATATTCTTGCAAGAAAGAAATCCCTTCAAAGTCAGCTCAAAGATAAAGCGCTCTCGGAAGAGGAGGTCGCTGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 250768-257155 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEWS01000003.1 Ignatzschineria cameli strain UAE-HKU61 NODE_3_length_257155_cov_225.434015, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 250768 28 100.0 32 ............................ GATTCAGACAAAGCAATATTGATAAAGATACC 250828 28 100.0 32 ............................ TGAACAATACTTTTCTTTTTCTTTGCGGTTAC 250888 28 100.0 32 ............................ TTTAGCCCCTGATTCCCTAAACTCCAAAACAG 250948 28 100.0 32 ............................ AAAGCAACAAAATAAATGTATAAAGATTGATC 251008 28 100.0 32 ............................ TGTTTGAGCAGATTGGTGACTTCCCCAGCTGG 251068 28 100.0 32 ............................ TCTGGTGAATATCGAGGATCCCCACTACTTAA 251128 28 100.0 32 ............................ ACTCGATCAGGGGAGCCTCTTAAGGTTCGAGG 251188 28 100.0 32 ............................ TTCCCCGTCCGACGACTCAAACTATAGCAAGG 251248 28 100.0 32 ............................ AGAGCATGGAGAAAGTCCTAGGGCATGTCCCA 251308 28 100.0 32 ............................ ATAGGTGACTTATCGTCATAATTAATAGACTC 251368 28 100.0 32 ............................ TAAGGGGTTAGGGCGCGTCCCAGAGCATGCCC 251428 28 100.0 32 ............................ TGATTCAGATAGATTGTTGAATGATTCTGTTA 251488 28 100.0 32 ............................ ACTTATCAGGCTGTCTGTTGCGAAGCCAGAAA 251548 28 100.0 32 ............................ AGATTATTTTGCTCTTTTGTATGGGCTAAATC 251608 28 100.0 32 ............................ GAAGCAGGATCGACAAGAGTCCTTAGAGCAAA 251668 28 100.0 32 ............................ TATTTTCGCTTATGGCGTGCTTTTCCCTTAAA 251728 28 100.0 32 ............................ CCTTATTTTGCTCCGTATTTGTTTTTTGCTCT 251788 28 100.0 32 ............................ TTGATTACAGCAGACAACGGATAGCCTTTAGC 251848 28 100.0 32 ............................ TTGTTCGTTTTTATAGAATCGCTCACTATAAA 251908 28 100.0 32 ............................ TGATACAAAAAACAAGAAATGATAATATAGAA 251968 28 100.0 32 ............................ TGATTTGATTCCATCAGTTTTGAGATCTGATC 252028 28 100.0 32 ............................ TTTTGCCCCCCTCACGGGGTAGCTTATCTTTT 252088 28 100.0 32 ............................ AAACACACGGGACTGGGTGGAAGAATCAAGTA 252148 28 100.0 32 ............................ CATGTATCGCAACCTAACCAAGAATAAATAAA 252208 28 100.0 32 ............................ TATAACTATCCCCTTCTCCGACTCCTGAATAT 252268 28 100.0 32 ............................ ACGAGCTGAAGATTTCATAAAGTCGAGTACTG 252328 28 100.0 32 ............................ CATTGCAATCAGGGCGATTTGAAGCCGATATA 252388 28 100.0 32 ............................ GCATAGCTCGCATTTTTTCATATTAAATTTCC 252448 28 100.0 32 ............................ TTCTTATCTCTTTCGAGGGATTCGCGGGCATC 252508 28 100.0 32 ............................ CACGTGCCCCCATAAAGGCGTTAGTATCCGCT 252568 28 100.0 32 ............................ TGTAGCCACTCCTCGATTGCATCATGGGCATG 252628 28 100.0 32 ............................ ATCATGGCCGCATTGGATTGGGTCTATAGAAG 252688 28 100.0 32 ............................ ACATGTTAACCGCTATGAAGCAATGGCTAAAG 252748 28 100.0 32 ............................ GTTTACGAATTTATTCCCACGTGCCCCTATAA 252808 28 100.0 32 ............................ TCGTTGAAGATGTTCGATACTTCGCTTGTAAT 252868 28 100.0 32 ............................ TTTCGGTTCGTTTCCCGCTGTTGATGAGTCAA 252928 28 100.0 32 ............................ CCAGAGCATGACCCAAAGTATGGATAAAGTCC 252988 28 100.0 32 ............................ ACAATCTTAAACTCACCGAGCGTAGTCTAGTA 253048 28 100.0 32 ............................ CCGCTGTTGATGAGTCAAATATAGCAACACCC 253108 28 100.0 32 ............................ ACTAGCTAAAAATAGACCTCTTCCAACAATGA 253168 28 100.0 32 ............................ TTTTGATTTAACGCTTTTAGGTGTTGAAAATG 253228 28 100.0 32 ............................ AATATTTTTAGAGAATGGGAAGAACAGGAGGG 253288 28 100.0 32 ............................ AATGGTAGAACCTATTACATTGGCAAAAGTCG 253348 28 100.0 32 ............................ TTGTAAGGGGAAACCCCTTAACCCCTTTTAAA 253408 28 100.0 32 ............................ CTTAATAAAATCAAGGGAAGATTAATCCTCCC 253468 28 100.0 32 ............................ ATTAGCACTGATTTGCTTGCAAGTCGTAAGTG 253528 28 100.0 32 ............................ TTTAAGAATGATTCCTTTTTCAATAAGATTTC 253588 28 100.0 32 ............................ CAAGGCTTGCGGGCGAATCAGTGACTGCCAAA 253648 28 100.0 32 ............................ TTGATGAAAATGAGGGAAGGGCATTTTGGATA 253708 28 100.0 32 ............................ GGAGATGAGATACCAGGCACAGACATGGTTGT 253768 28 100.0 32 ............................ ATTTTAAAAGAGGACCAATCACGGGAATATTT 253828 28 100.0 32 ............................ GCTTGCGTCGGGATAGATCTTAATCGCATGAC 253888 28 100.0 32 ............................ TACCCGATCTTCTTAAAGAGCATGGCGCAACC 253948 28 100.0 32 ............................ GATCCTAAAGCAGAAGAGATCTGGATCGTGGA 254008 28 100.0 32 ............................ ATTCGGTAGCGCAAATCGAACAGTTGCCGAGC 254068 28 100.0 32 ............................ TCTGGAGTTTATAAGATTCTGCTCAATGCTAT 254128 28 100.0 32 ............................ GCCGCTGCAATCTGGTACAGAGATAACGCCGG 254188 28 100.0 32 ............................ TAGATAGCTGCAAAAGAGATCTGCCGGAAAAT 254248 28 100.0 32 ............................ GGTTGAGCTTGATGAGTTCTGGTATCTCTACG 254308 28 100.0 32 ............................ TGCTAATTTAGGATTTTCTTTAATCCAGTCAC 254368 28 100.0 32 ............................ TTAATCGGTTCTTCAACCGCAGCAATAATGCT 254428 28 100.0 32 ............................ CATCATTAAATAAGGCATGTTCACTGCTTACA 254488 28 100.0 32 ............................ TGGTCTTTTGAAACTGTGCAGTTCCAAGAATT 254548 28 100.0 32 ............................ GCTACTTACATAAACAACATCGTCGGCATTCT 254608 28 100.0 32 ............................ TCTCGCTAAAGTCTTTGAGCATCTCGCTCGAT 254668 28 100.0 32 ............................ ATCTGAGCCGAGCATGATTCCGCCGATTGCGC 254728 28 100.0 32 ............................ CACTTAGACTGCACCCATGATGAACCTTGATA 254788 28 100.0 32 ............................ ATATGTTTTCTAATCTTTCATTAATAGCTTGA 254848 28 100.0 32 ............................ TCTTTCAATCTCTATTTTTTCTTTGTCTATAT 254908 28 100.0 32 ............................ TTGTTTGTAGATATCGAAAAACTAGAAGAGGG 254968 28 100.0 32 ............................ CTTATCTTGAGCAGATCAAAGCAGAAGTTGAA 255028 28 100.0 32 ............................ TGTTCGCTCGAGGTGTACGCTATCGAGAGATC 255088 28 100.0 32 ............................ GGCTACAGCGACGCTCTTAAGCGCATCGCATT 255148 28 100.0 32 ............................ GTGGACCGTTCAATGCGATAGAGAATCGAACT 255208 28 100.0 32 ............................ TTTAAAATAGAGTTTCGTTGATTGCGCTCTCA 255268 28 100.0 32 ............................ AATCACTAATGCATCAAGGTTTGCATAATCAC 255328 28 100.0 32 ............................ GATTGGCTCGCTCGAGCAATTGTGGATTACCC 255388 28 100.0 32 ............................ GCCGCTGCAATCTGGTACAGAGATAACGCCGG 255448 28 100.0 32 ............................ TAGATAGCTGCAAAAGAGATCTGCCGGAAAAT 255508 28 100.0 32 ............................ GCAATGTCCTTCAGCGTTAAAACCCGTGATGC 255568 28 96.4 32 ..........A................. TCAATACGATTCATATCGCTTGCGCCGGGAAG 255628 28 100.0 32 ............................ ACCCAGATGGCAATCCCTATCTCTCAACTGCT 255688 28 100.0 32 ............................ ATGGTTTGTGGTTTGGTCTTTTGGTATGGTAC 255748 28 100.0 32 ............................ CATGGTTGCCACGTCGGGCATAGTTGTGGGCA 255808 28 100.0 32 ............................ TCGAGAGCATCATAATACTGCCTCTCGCTTAT 255868 28 96.4 32 .............T.............. TTGATGCTCTCTGACTTAGCTTGGTGATCTGT 255928 28 96.4 32 .............T.............. TTAAGGTAGGCCAGAAAACCTCTTATAGTATC 255988 28 96.4 32 .............T.............. TTTTGCCGTTTGATTTTAAAAAAGCGCTTTAA 256048 28 96.4 32 .............T.............. TTGTAAGATGATTCCCTCTTTTATTAAACGTT 256108 28 96.4 32 .............T.............. TATTGCTTGAATTTCAAATACAGACTCTTCTA 256168 28 96.4 32 .............T.............. GATTTGAAAAAGGTTTTAATAGAAAGAGATAA 256228 28 96.4 32 .............T.............. TTTAACGAAAGCCTCTGGACGGTAGACTGCAA 256288 28 96.4 32 .............T.............. CTTTACCCCTTAGACGCTCGGCGCTTGCCAGA 256348 28 96.4 32 .............T.............. TTTTTGTGCAGCTGCTTCTGCGCTCTTAATAA 256408 28 92.9 32 ............GT.............. AAATCGATTGCGGATATGCTCCATAGGTGAGC 256468 28 96.4 32 .............T.............. TATTTCATACACGAGAACTATAAATAGAGGTG 256528 28 96.4 32 .............T.............. GCAACTGTCTTCCCGCCGATCTGCTGCAAAGA 256588 28 96.4 32 .............T.............. TATCCTATGTTAGAAGCAATCAAAGCGGAGCT 256648 28 96.4 32 .............T.............. TTGCAAAGCTTCGAGAAGATACACAGAAAGAG 256708 28 96.4 32 .............T.............. TGCTGAAGCTCCTTCAAAAGTTGTTTTACCTG 256768 28 96.4 32 .............T.............. TGAGATTTCATGAAGAGCCGGAAGAGTATGAA 256828 28 96.4 32 .............T.............. AACGAAAGATTATCCCTTCTATCGCGTGCTTG 256888 28 100.0 32 ............................ CATTCATTGTCTGATAGCTTCAGCATCAATTG 256948 28 100.0 32 ............................ CATGGTTGCCACGTCGGGCATAGTTGTGGGCA 257008 28 100.0 32 ............................ AACGCTTGATGACTTGGTGTGTGGGTAATGCG 257068 28 100.0 32 ............................ TTCGCCGTCAACCAATACAGATACCTGGCTAC 257128 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 107 28 99.4 32 GTTAACCGCCGCACAGGCGGCTTAGAAA # Left flank : ATTCGTGATTATGCTTTAGTAACTTCCATAAAAAGAGTTCCAGATGAGGTGGATGATTATGTCATTTTTTCAAGATGGAGACCCCAATCAATTAGTAAAAGCCAAGTGAGACGTTATCAAAAGCGTCATCCTGAAAAGTGGAGTGATGCTGTTTGTGAATATGTTTTAACTGAGCGTTCTTTACCTTTTGGCATTCCGCACTTTAAAGTGAAAAGTGGAAGTACAGGACAGACTTTTACAATTTGGGTAAAACGACACTCTTGGGATAAGCGCAATCAACGTCATGGAGTATTCGATAGTTATGGCTTGAGTAAAACTGCTGCTGTTCCTATTTTTTAAAAAAGAATGCACCTTTCTGATTAGATAATAACCCTAATTTTTCGTTAAGATGTAACTTATTGATTTTTAATCATGAAAAGTAATCTAGAAAAATTAGGGTTTTTTTATCCCTGTTCTTTAACAATTTGGATATAATGAGCGTTCTAGAAGATTTATCTCTA # Right flank : | # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCGCCGCACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //