Array 1 87095-82267 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWNB01000011.1 Halomonas sp. G5-11 Scaffold11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 87094 28 100.0 32 ............................ GGTCGGCCCCGATACTATCAACAAACTTTCTT 87034 28 100.0 32 ............................ AAAGCTTGTGCTCCCATATCACGTCTTCGAGC 86974 28 100.0 32 ............................ TCGCAGTTGGGGCAGCCGTACTTGCCCAGGTG 86914 28 100.0 32 ............................ ATCTTGCCCTCGTTGAAGCGCTTGCCGGCGGC 86854 28 100.0 32 ............................ ACCCATCGCTCTCCACTCATGTAAACACCCAA 86794 28 100.0 32 ............................ AGTCCGGGTACTCTCGACCCTTGCCGGCGCGG 86734 28 100.0 32 ............................ CCTAACCCGAGTGGCTTTAAAGTTATGTCGTC 86674 28 100.0 32 ............................ ACGCTGCTCTCACCGCTGTAGTCCTCGATGCG 86614 28 100.0 32 ............................ AGTCTGAGCCGTCAAAGCAGATCGGCTGGTTT 86554 28 100.0 32 ............................ GTATTGCATTTTGGACATGGATCGGACATATC 86494 28 100.0 32 ............................ GCCCTCGATCCCAAGGAGTTGGGCAACGCGGT 86434 28 100.0 32 ............................ TTCCTGAGCGGCGGAAAGGGGCGCGATGTGTA 86374 28 100.0 32 ............................ CCTCCAGGAACGAGAGAGCCCGGCACGATGGC 86314 28 100.0 32 ............................ GAAGAGCCGTCGCCGGGGTCGCCGATCAGCGG 86254 28 100.0 32 ............................ TTCTGGATACCGGCCACCGCAATCACCGGCTA 86194 28 100.0 32 ............................ AATTTACTTGCGTTGATAGTTCTCGTCGTGAT 86134 28 100.0 32 ............................ TCAATGCACTGGCTGAGGCTCGTATAGCCGAA 86074 28 100.0 32 ............................ GTTTCAGAAGGGCAAGACGCGCATTATCACGC 86014 28 100.0 32 ............................ TGGTGGAGTATCGCCGCCGATTTGCCGAGTGG 85954 28 100.0 33 ............................ TGTCAACAGCGTCCGTATCCACGTTCAAGCAGA 85893 28 100.0 32 ............................ TTGATACTGCGGTGCGCAGCTTTCTCCTGTTC 85833 28 100.0 32 ............................ AGCCGGTGGGGCGGTGGACCAAGATGTTGGCT 85773 28 100.0 32 ............................ ATCTCCGGGCTGAGGTTCAGCGTGCTGTCCTC 85713 28 100.0 32 ............................ ATGTCGCGACTACGCTGCTCCGAGCGCTCCAT 85653 28 100.0 32 ............................ TTCCCGGCCGGCGATCACGTCAACATTCCGGT 85593 28 100.0 32 ............................ AACAGCAACATCGGCGCGCGCGGCGTCTGTGA 85533 28 100.0 32 ............................ TCGAAGATCGGCCCGATGACGTTGCACAGCGC 85473 28 100.0 32 ............................ TCCGGCGCTCTGACCTCTGTGCAAGGCAGCGA 85413 28 100.0 32 ............................ TGGCTGACTACGGGCGAGTGAAGGCCGGGGCA 85353 28 100.0 32 ............................ TCGGCGAGATGCACCGAGGTCACCTCATGCTG 85293 28 100.0 32 ............................ GACCGGCGAGCCGGTCAATTATGCCGATGCGG 85233 28 100.0 32 ............................ AGCCGACCGGCAAAACGATCCAGGCGCGGCTA 85173 28 100.0 32 ............................ AGCCGACCGGCAAAACGATCCAGGCGCGGCTA 85113 28 100.0 32 ............................ TATAGCGAGCGCCCGCTGGCCGGCGTCAGCTA 85053 28 100.0 32 ............................ TGTCGCTGGAAGGCCAGCCGCTCGCCACCATC 84993 28 100.0 32 ............................ TGCTCGAACAAGGCATCGAGCTGGGCATCGTC 84933 28 96.4 32 A........................... CCCACCGGACGTACGGAACGCGAGCATGGCAG 84873 28 100.0 32 ............................ AGTATCAGCTGGTGCCTATTGTTTGTCATACG 84813 28 100.0 32 ............................ TGCTGGACGGCATGCTGAAATACGGCCGCAGC 84753 28 96.4 32 A........................... AGGAGAGCAGAAGAGCCAGCAACAACACGAGA 84693 28 100.0 32 ............................ AGACGGTGCGCAATGTCTTACCCGCCCCAGGT 84633 28 100.0 32 ............................ ATCGGGGCAGTCCATCCATTCATCGGGCAACG 84573 28 100.0 32 ............................ AGGTAGCCACCGACCAGGTGATCCACCTGCAC 84513 28 100.0 32 ............................ GCGTAAGCTGCGCACCGAACAATCCACGATGA 84453 28 100.0 32 ............................ TCCCAGCGGTTGAGCGCGTCACGCAGCTGGCG 84393 28 100.0 32 ............................ CGAAGCGGGCATTGGCCGTCCAGATGTCCTCG 84333 28 100.0 32 ............................ GAAATGTCAGTTATATCGACATCTGGGCGCGC 84273 28 100.0 32 ............................ GCCGGCATTGAGTTCGAGGTAGGGGAGAGCAC 84213 28 100.0 32 ............................ TGATAGCGGCACCAGATGACGTTATGCCGGTC 84153 28 100.0 32 ............................ GACTTGCACCAGCATGCACCAGATGCATTGGC 84093 28 100.0 32 ............................ ATCTTTTGCCAGGACAGGAAGGTATCGAACTC 84033 28 100.0 32 ............................ GTGCTGGACAGCGCGGCCCTGACCATCACCGT 83973 28 100.0 32 ............................ GCTACCCGTCCAGGTGCTACCCGTCCTACCGC 83913 28 100.0 32 ............................ TGAAGAGGAATGAGACCCTTTGCCCAGGCCAG 83853 28 100.0 32 ............................ CTCGGTCTTCTGTACCATGCCCATTGGCTGGC 83793 28 100.0 32 ............................ ACAGGTGAAGGGGTAGCTTGCCGGCGCCGATC 83733 28 100.0 32 ............................ TACATGTTGACGTATCAAGGGCAGACGCTGCT 83673 28 100.0 32 ............................ ACCCCGAGCGGATGCCGGACCCGGCGCGACTG 83613 28 100.0 32 ............................ ATCGCGTCGATGCGCGTGGCCTGAGCCTCGGC 83553 28 100.0 32 ............................ TTCCCTCTGCGTGCCTCTTGCCGCCTAGTGAT 83493 28 100.0 32 ............................ ATAGGCAAGACTCGCGTAATGGGTGAGGTGAT 83433 28 100.0 32 ............................ TGATGGCGGGCCTGAGTGGATGCAGATAATCA 83373 28 100.0 32 ............................ TTGGCCTGGCCGTTTAGTCGACGAAAATAGAC 83313 28 100.0 32 ............................ AAGAACCGTCAGAAAATGAGTTTTGCGATGTG 83253 28 100.0 32 ............................ ATCACATGCTCGTCACGATCCATTGGCAGCCC 83193 28 100.0 32 ............................ GAGCTGCTCGGCGGGTATGTGTTTCGGCGCAA 83133 28 100.0 32 ............................ TCGGCGCGCATCGTCGTCACGCCATCGGTGAT 83073 28 100.0 32 ............................ GCTGCCGCCCTGGCCATGGCGCACCACCTGCA 83013 28 100.0 32 ............................ TGTCGCCCTTAGCTTATCACCGACGCGCCAGC 82953 28 100.0 32 ............................ ACCGCCGGGCGCCATGGATACGCGGACGGTAT 82893 28 100.0 32 ............................ TTCGCGGTAGAGCCTGGCGATGGGGGCGGGCA 82833 28 100.0 32 ............................ ACCGCATGGCTGCGCCATGAGACACCGCCCGA 82773 28 96.4 32 ...........................G ACTCCCAGACGTTGCCGACCAGGTCGGCGATG 82713 28 100.0 32 ............................ CGAGGGCGAGATCGACTACAGCACCGGTGTGG 82653 28 100.0 32 ............................ ATGGTGTCGGCGATCACCTGGGCGGTGCGGGT 82593 28 100.0 32 ............................ GTCGAGATCGTCGTGCGCGGCCGCCACAAAAC 82533 28 96.4 32 .................T.......... ACACCACCCGGCTGATTTTCTCACGGCGGGCC 82473 28 100.0 32 ............................ GTCACGCACCGTGATCTGCATCCAATCGGCGA 82413 28 100.0 32 ............................ CGTTCGGCTGAGAATAGAGCGGGCATCGGGAA 82353 28 100.0 32 ............................ ATTGATGCCCTCGGGTCACGCAATGATCTGCT 82293 27 89.3 0 ......................-...GT | ========== ====== ====== ====== ============================ ================================= ================== 81 28 99.7 32 GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : AGAGCCTGACGCAATTCATAGCGCAACCCTGGCTCGCCGGCATGCGCGAGCTCGTAGAGACCGGCGAGATTCTGCCGGTACCCGACAACGCGTTGCATTGCGTGGTCCGGCGACGACAGTTCAAGACCGGCAATGACAGCCAGGTAAAGCGCTACGCACGGCGTCATGCCATCGACCTCGAGGAGGCGCAAGCCAGGTTCGCGCGCACCAACGAACCACGCATCCCCTTGCCCTTCGTTTCACTCAGTAGCCGATCCAGCAAGCAACGCTTTGCCTTGTTCATTGAGCACGGCGAACCGCAGCCGACACCTATCAGCGGTCACTTCAACCATTACGGCTTGAGCACGGAAGCAACCGTGCCCTGGTTCTGACCCTTTTTTCGAGCGTTGTTATAGAGCTCTGAAAAACAATGAGTTAGCGACGCCTCCGAAAAAAAGGGGGCGTCGCGCTTTACGGCTATTGCTCTTTAACAATCAGGGGTTTAGCTTGAAAAAGCTCTA # Right flank : GAGTGCTATCAACAACACCGGTGAAAACACCGAGTATGCTATGAGGCGGTCTTAGGTGTTTGCCCCGGTCTTTCATCGTTAGGCTGATTGTCTATTTCCACCAATGGAGTGCTGCCATGACGTCTTCTTTTGATCAGACGCTTGCCGCTCTCGATGCCTTGCATGGGCAAGACCCAAGAAGCGTCGAGGTCGAGGGCGAATCGCTGCCCCGTGAGCTTTGGCATGCGCGGCGGATGAGTGCCTGGCTGGCGAGCCTGCGGGACTCGCCGGATGAGCTGTTGCAGCTGGCGGTGCGCGGTCAGCATCTTAAGCGCTGGCAGGTGCCGCGCGAGGATTACCCCGAAGGCCGGGTGGGGTATCTCAGCTGGCGGCGCGATCAGGGCCGGCGGGCCGGCGAGATCACGGCGAAGACAATGAAAGAGGCTGGTTACTCGGACGAGCAGGCCGAACGCGTGGCGCAAATGATCCGCAAGCAGGGCCTGGGGCGCGATGAAGGCACT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //