Array 1 1531702-1534681 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP062310.1 Infirmifilum lucidum strain 3507LT chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================== ================== 1531702 25 100.0 39 ......................... TGTAGAAATCGCAAGTGTTCTTTTATACTATCTGTTTTT 1531766 25 100.0 40 ......................... GTACTTGGAGCAGGCGATTATGCGGGCCTCCTCTGTGTGG 1531831 25 100.0 41 ......................... TTTCGGCCATCCCTACACCTCACCTCTTTTTTCTTTTTCAA 1531897 25 100.0 42 ......................... TGGATAATCGCGGCAAGGTAGCGTCTCTCGTTGTCTGTTAGG 1531964 25 100.0 38 ......................... CGTCCACACCGCGGCAGTCGTGTTCAAGCGCCACGCCG 1532027 25 100.0 39 ......................... CTGGGGGCTCCACCAGCACGTAGGCAGTGTCAGGGGCAT 1532091 25 100.0 42 ......................... AGAACTTACGGAGAAGGAGAGGGAAGACTTACGAGAGTTCTT 1532158 25 100.0 37 ......................... TATTTAAGCCTTTTCCGGGCCTGCGGAGCCTTTATAA 1532220 25 100.0 41 ......................... GCATGTCCAGCGGCCGGACGGGGGCCACTACCACGACATAC 1532286 25 100.0 42 ......................... TCTGGCCCCCTATGTTGAACACTGCCAGCGTGACCCTCTTAG 1532353 25 100.0 39 ......................... AAGGACGTGATAGACAGGCTCAACATCGTGAGGGTGACG 1532417 25 100.0 44 ......................... TGGTGGGGAAAAGCGGCCAAAGTATTCAAAACGACAAGGGATTT 1532486 25 100.0 41 ......................... ATTTTTTGCCCCACCAATTATATTATATCCCTCACTGCCTA 1532552 25 100.0 37 ......................... CGGATGGCCTCGGCCTCCTCCCTGCGGTACGTCGCGA 1532614 25 100.0 38 ......................... TCTTCCACCTTGCCGCGTTTAATATCGTACCCAATGCT 1532677 25 100.0 41 ......................... GTACACCACGCCGGCAAGAGTGAAGGCGAGGGCCAGTGCCA 1532743 25 100.0 37 ......................... TTGCAGGGTCACAGACGTACAGCGCTGCACTGCCGCT 1532805 25 100.0 40 ......................... TTTCCCTCTCGAGTGAGGAGTATGGAGACGTGCTTTTTGC 1532870 25 100.0 44 ......................... CCTCCAATAATACTTCTAAGAACGCCGACATCGTTACTTTCACC 1532939 25 100.0 41 ......................... GGTTGAGCCGGGCACTCTGAACACCAAAACCACGAGGATAT 1533005 25 100.0 39 ......................... CGTATCTCCACTGGCAGCAGTGAGAGCAGCAGAACCAAG 1533069 25 100.0 43 ......................... GGGGGCGGCGCTGATGGCCTCGCACCTGACCTGGGCCTCCCGG 1533137 25 100.0 39 ......................... TTGAGCATAGATATTGCGTTGAGCGTGCTTGCAGAGAGG 1533201 25 100.0 38 ......................... ATCGAGTCAAAGACCGGCCTGTAGCCGCCGTACACCGC 1533264 25 100.0 42 ......................... TTTTTCCCAGCGAATTCGCACGAAAGGCATATTTTTCTTTGA 1533331 25 100.0 38 ......................... CTCCAGGAGCCTGCTCATCCCCGCAGTCCTGTTGTTCA 1533394 25 100.0 41 ......................... TTCAATGCTGAAGCTCTTGAGCAGCTCTGGCTTCTCAAGAA 1533460 25 100.0 43 ......................... AGAGAGGAACAGTAGCATGATAAACGCGGCTATAAAGGAGTTG 1533528 25 100.0 39 ......................... ATGGAGGAGGAGGCTAGGGGTGTGTTCTACGATACTCTT 1533592 25 100.0 41 ......................... TTTTCCGAGCCCTCTCCCCGTGGACTTTTCCAAAAATGATC 1533658 25 100.0 40 ......................... CTAGTCGAGGCCGGGGAGGAGCTAGGGGACAACGTGAAAA 1533723 25 100.0 39 ......................... GCGTACCTCGCGCTACTCAGGCCAGTACTCGGCTTCCTC 1533787 25 100.0 42 ......................... AGGTGGCTCGCCCACTTACTGGTCACCAAGATCATCTACGAG 1533854 25 100.0 39 ......................... CTTCTTTTTGACGTCGACGTAGACGCGGCGGTCCCCTGT 1533918 25 100.0 39 ......................... ATGCAAGGTCACCTCTCCTCCACGAGGAGAGGAGAACAA 1533982 25 100.0 43 ......................... ACGGCGAACAGCGTGTCGCCCAGGAAGACGTAGTTGCCCAGGG 1534050 25 100.0 38 ......................... ACTATGCTGAGACAGAAGAAGAAGCACTAGAACTCATA 1534113 25 100.0 42 ......................... TTTTCGAATAAACGGGGAGGGCCCTCAAGAGAGGAAATCGAG 1534180 25 100.0 45 ......................... TTCTTTCTCTTTCTTTTATCCCCGTGATTTTCCCCCCTCTTTCTT 1534250 25 100.0 39 ......................... GGAAATGGACAACGGTTCAAGTCACCCCTGACTACACGC 1534314 25 100.0 46 ......................... TGTTGGGGTGTCACTAACGATAACTGCTCTATACGCCATACTTGCT 1534385 25 100.0 41 ......................... AGAAGAGCTTGAAAAGATGTTTCCGGAGACAGAGGGATTTG 1534451 25 100.0 41 ......................... GTTTGGGCTTCGCCTTCCACGCGTGTTCCCTAATTTTCAAT 1534517 25 100.0 39 ......................... TATATTTAAAAGCGACCTCGTGCACCATCATTGGCTGTC 1534581 25 100.0 50 ......................... TTTGAGAAGCAGAAGGGGGCAACGGGTCGAGTACAGCCTTTCCTCTACTG 1534656 25 80.0 0 CG..G.......G..T......... | T [1534658] ========== ====== ====== ====== ========================= ================================================== ================== 46 25 99.6 41 GAAGAAGTCAAGAGACAATAGAAAG # Left flank : CGGCAGGGCGTGCCCGACCTCCCTCACCGACCTCAGCACGGACTCCAGCGCCACAACGACGTACGCCGACGCCCCCTTGAAGCACCCGAGCGAGAGGAAGCCCCTGAAGCTCTTCTCCCCGAACCTGTAGGTGGCCTCCCTGTAGCCCAGGACATCCCCGAGAGTGGCTACGACTATCATCACCAAGAAGCCTGCGGCAAGAGTATAAATCCTTTACCGGCGCGGGGAAAAACGCTAAAAGGCCCCCCGAAAGGCCTAAACACTATTTTCCACAGTGAAAAACCTACCGGCATTTATACTTTTCCCCGGGAAGCTTCCCCGAGAACACTCAGACACCACTTTATAAATCAATTTTCATTAAAGTTGTGAACACTTAAAATAGAGGGAGGGTTTGGTTTCACAACCACAGGAAGAAATTTGCTTATCAAGCCGCGTGCACAGAGGAAGAGAGCAGAGGCCACAAGAGAACCTTTAAATAACCCCACACCCACTACTCAACA # Right flank : GACGGCGAGGAGCCGCTGCGACGAGTTCGCGGAGGGTGGCGTGGAGCCGGGCGGGGGAGGCGGCGTGATTTTTTTGTTATCAGCGGGCCCCGGAGCCTTATTCCATAATGAAAAAGCATAAATATTAGCATTAATAATGTTTGTACAATGACGGGGCCCGAGGATCTTCTGAATAGGGCTGTCCAAGCCGCTTCTCAGGCTTCTAGGGAGCGCGTCGAGAAGAGCCAGGTCGAGGGGCTTCTCAGCTTCCTGAACGAGAGGAACGACGTCAACGAGCTCCTCTTCTACATAATGAGGCAGTCTGCGAGGGGCTCGATTGGGAGGAACACCGCGAGGCTGCTCGTCGAGCACATACGCGGCATTAAGGGCGATGTGGAGAGCGTGAGGAGGTACCTCGGCTACTTCAAGTGGGCCTACGAGGTTGTCGAGAAGAACAGGATAACGTCTCCCCTGGATAACTTCAACAAGCTCGTGGACGCTTTCCTCAAGAGGTAGGTGTC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGAAGTCAAGAGACAATAGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 2 1549547-1556832 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP062310.1 Infirmifilum lucidum strain 3507LT chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ==================================================== ================== 1549547 25 76.0 30 ........AG...C....G....CC TTTAAATAACCCCACACCCACTACTCAACA G,C [1549552,1549561] Deletion [1549602] 1549604 25 100.0 42 ......................... TAATTCGTAGCCGCGAATTATTAAATAACATCCACGAGAAAG 1549671 25 100.0 44 ......................... AGTGACGGTCACTGTAATAACGCGTCCGTCCACACTGATCCCAC 1549740 25 100.0 44 ......................... CCTTCTCACTTTGTTGAGATCAACGAGTATGCGTTCAAAATTAT 1549809 25 100.0 42 ......................... AAAGCGGGGCTCGGGGGGAGGGACTACGCCCTCCCTGTGAGC 1549876 25 100.0 38 ......................... TCCTCTAATTTCTCCGCGTCCACCATCGCGCGCTCGAA 1549939 25 100.0 43 ......................... TCTATGACGCGTGGCAGCACTGTCCTATACGGTATCTCCAGTG 1550007 25 100.0 43 ......................... TAAAACCTGTAGAGTTTCCAATGTAGCCCGAAGAGGGCCCCGA 1550075 25 100.0 42 ......................... CAGTATTCGTAGGTAGCAGTGGTGTTTCCCCGTGTTTCCCCG 1550142 25 100.0 42 ......................... TTGCTCTACTATTACCTCACCTCCATCGACGCCAGAGAGGGA 1550209 25 100.0 50 ......................... AGTTGGCAGCAATGAAAGTAGCAGAACTAAGAAGTCCCTGTCGTTCTCGG 1550284 25 100.0 43 ......................... TAACATGAAGGCAAGGATGACAGTATTTCGGAGTGACGTTTAT 1550352 25 100.0 40 ......................... GCCGAAGACTTCCGTCACCCACGTGTAGCGGTTGCGCCTG 1550417 25 100.0 51 ......................... CCCAGGTAGTACTCAATGATCGCCTTGTTAAACTCATCTGCCCACTTTATC 1550493 25 100.0 43 ......................... GATGAGCTTGTCACGCCAGTAAGGCATCACGTCTAAGCTCTTT 1550561 25 100.0 38 ......................... ACAAAATGACTGTAACTACTCCCCTTTTCATCATGGTG 1550624 25 100.0 38 ......................... TGCTTTTCCTTTCCGTAGCTCCAGGGCTACTTCCTCAA 1550687 25 100.0 39 ......................... TTATCTGTGACGTTATGTACCGGTGTCCCCGTAACCCGT 1550751 25 100.0 42 ......................... TCCCATGTCCTGAAGGTAAAGAACAGGCCGATCCCATACCTG 1550818 25 100.0 46 ......................... CTGGAGCTCTCCCAGCGCCCCTTCGACTACATCGAGGCCATAGAAA 1550889 25 100.0 38 ......................... CCTAAAGGACAGCGAAGTCCTGCACCGGGGGCATTTAA 1550952 25 100.0 38 ......................... CAAGAGTAGTTCAAGGTCTTCCTTGGAGATTATCCCCC 1551015 25 100.0 40 ......................... AGGATGTGGCGAGGCGCCTGGCCTCGATACTAGAAGAGCT 1551080 25 100.0 38 ......................... AATAATCGCTTTATTGAAGCTGTCTGCCCACTTGATCA 1551143 25 100.0 41 ......................... TGCCCTCAACTCCTCCGGCCGTATCTCCTCCACTCTATACC 1551209 25 100.0 43 ......................... ATGTTTTCAAGGTCTCATGGACAAGCGGGGGTACGGGGTATTC 1551277 25 100.0 42 ......................... GAGGCCAACCTTACGCCACGTCTTATCGCCAATGACAAGGTA 1551344 25 100.0 40 ......................... GCCGAGGTTAGAAAGATGCTTGAGAGAGCATTTCTGGAGG 1551409 25 100.0 43 ......................... TGTAATATCCCCAGACCAAATGATGGCGATAATTACAGATGGT 1551477 25 100.0 40 ......................... TTGCACCTTGGACACCTCGTGTCTTTCTTCCTCCCAGTAT 1551542 25 100.0 43 ......................... GTACACTCCCCGTACACCACTCTGTACACTTCCCTGTACACTT 1551610 25 100.0 40 ......................... CATTCCCCACTCTCCGCAACGCCTCAAAGACCTCACTACC 1551675 25 100.0 41 ......................... CGCGAGTGCTCGCTCCCATGCGCCAGAGTCGATTGCTTCTA 1551741 25 100.0 43 ......................... TGGGTTCTCGCGCTCGCGGTAGCGGCCCCCCTGGCGGTCTCCC 1551809 25 100.0 36 ......................... ATCTTCTCTGCATTGTACATCGCCCGCTCGAAGAGG 1551870 25 100.0 38 ......................... GAGAGGTACGGGTTTAGGATAAAGAAGTTCTTCGTAGA 1551933 25 100.0 42 ......................... CATAGCTCCCTTGATTATCCTGACGTCTTGTAAGAAAACCTG 1552000 25 100.0 42 ......................... TGACAAGACAGACGCCCGCTTGATCCTAGATTTAAGCACGAA 1552067 25 100.0 41 ......................... ATTGAGGGAGTGCGTAACACTATTATCCAGGTAGTTAACGC 1552133 25 100.0 40 ......................... TGTGGGAGAAACTGAGAGGCCTCGCAGAATGGATGTTCTC 1552198 25 100.0 41 ......................... TAAGCCACTGGTAGAGTCGGTTAAAGAAAATGTAGCTGGCC 1552264 25 100.0 38 ......................... CAGAAATTGGTCTCAGCTAGTAAAGCTGTATAGGTAGA 1552327 25 100.0 41 ......................... AGGGAAGCCGTGAAAACGCTCGGGCCGTGCTGGAACTTTAT 1552393 25 100.0 46 ......................... TTTTACCCGGGGCGTTTTGAAAACAGGGCTAGGGCCCACGTATTTT 1552464 25 100.0 40 ......................... TGTAAGCGAAGGGCAGAGCCAGCCGGGGTGCTCGTAGTAT 1552529 25 100.0 39 ......................... CTAGTCACCTTGCGAGATGGTTACACTAGCCCGAATGCT 1552593 25 100.0 39 ......................... GTTCTGTCATTTTGCTTTCACCAACATAATAATATCCCT 1552657 25 100.0 38 ......................... AAGTACACCTCTGTACTGTCAACCCCCCTCTTTACCCT 1552720 25 100.0 47 ......................... GAGTGGGTGAAGACGAGTGATCGCCGTACCTCCAGTGGCTTGAAGAA 1552792 25 100.0 38 ......................... CTCTATGCCGACGGAGTAAGTCCACGCAGCCCTCTGTA 1552855 25 100.0 42 ......................... TCGTGTCAAATGATTTTGTATATGTTTACATGCGTTGAGGAT 1552922 25 100.0 41 ......................... TTGGATGTCAACAGCATGTATCCATACGTGATGGCGAATTA 1552988 25 100.0 41 ......................... TGCGGTGCGTACGACGTCCCAGGCCTCCTCCGGGTGATAGA 1553054 25 100.0 42 ......................... GTTGCTCCCCCACCTCTATGGTTATAGCCTTCTTCCCCTTCT 1553121 25 100.0 37 ......................... CGAGAGTTACTACAGGCGGAGGTTCGGCGTCTCTGGC 1553183 25 96.0 43 A........................ CTGCTGCCAGGAGGTCTATGGTGGAGAGGAGGTCTTGGAGGAG 1553251 25 100.0 38 ......................... GACGCGCTTGACCAGCTCTACGGCGGCTTTGGCTCGAG 1553314 25 100.0 41 ......................... CTATACCCCAAACCCTGCTCCCTGAGTATGTCCAAGATTTC 1553380 25 100.0 42 ......................... GTTGTTGACAAGACGTGGTACTGCAGAGTTCTCTGGGAACCA 1553447 25 100.0 36 ......................... TACTGCACGGGCCTAGACGACGCTACCCTCGGGCCC 1553508 25 100.0 45 ......................... ATAGTTATTTTATAGGAGCAGGGGGGGCCGCTGGGAATGAATTAA 1553578 25 100.0 44 ......................... GACATCAATAACCACAAAGCGGTTCAGCAACGGTTCTGGGAGTG 1553647 25 100.0 40 ......................... TGTAACATTCCCCGCTTTCCCGAGAGCGGCCTTGACGGCA 1553712 25 100.0 42 ......................... TTTCCCCGGGAAAGAGAGGGAAAAAGAAAAAGAAAAAAAAAA 1553779 25 100.0 41 ......................... CCTCCCCCGGCTCCACAGACACTCTGGAGAACGCGGCGAGG 1553845 25 100.0 43 ......................... GCGGGCGGCATAGAGATCCCGTACAGCCCGACGCCACGCGTGG 1553913 25 100.0 41 ......................... GCCTCCGCGAGGGCCCCGAGACTGTCACGGGGGGCAGGTAT 1553979 25 100.0 41 ......................... CCTGGGCCATCTCCGGCCTCACCACTGTTATTATATCCCTC 1554045 25 100.0 40 ......................... TCCTCGTGGAGGAGAGGTAAACAACTGCTGACAGAGAGCG 1554110 25 100.0 39 ......................... TGGGAACAGTCCGTCGTCGCTGGCGAAGACGAAAGCCGT 1554174 25 100.0 41 ......................... TCCAGGTACGCGGCCAGTTCGTTGATTATTTCGATGATGTT 1554240 25 100.0 42 ......................... TGGCTAGCCTCGCCGCCGAGCCGCTACCACCGGATCCTTACT 1554307 25 100.0 41 ......................... TAACAAAGTTCCTATAGAATCCATCGGTATCTCCTCTGCTA 1554373 25 96.0 36 .........G............... ATCACCGACAACAACCACAAATCCACATAAAAAACT 1554434 25 96.0 41 .........G............... GCCTGTGTACCCGGCCTGATAAACACTTCCCCGAATAACCT 1554500 25 100.0 37 ......................... TTCGAATTCATCTTGGTTGAAATCGAAAGTGAATTTT 1554562 25 100.0 37 ......................... GAGTGGCAGTGACATTATTAAGTCGACCAAATCAGAG 1554624 25 100.0 37 ......................... GCCCACGTGCGCCTAAAACATTTAAATAACTCTTTTT 1554686 25 100.0 46 ......................... CACGAGTCCCGGGACTTTCCCTGCCTCCTTTAATTTAATGAACTCC 1554757 25 100.0 40 ......................... CGTGATACTGATTGTCTGAATTACTTGCTGTGCTACGGCA 1554822 25 100.0 42 ......................... GCTTCAGAGGCCGGGCCTCCCCTCCCTCGAGGCCCTCAGCAG 1554889 25 100.0 42 ......................... TTTCGCAATGAAAGGCGATATGGCCCAATAACTGGCCCGCCA 1554956 25 100.0 38 ......................... CATGTTGGGATCGTAGTGTACGTCGAAGGCTGCCAGGG 1555019 25 100.0 40 ......................... CCGGCTCTGGGGCAAACAACTGTTTTAATAACTTTAAAAA 1555084 25 100.0 41 ......................... ACTCCACGACAGCCGACCTACGCCTCCTACGGCGCCGCGGC 1555150 25 100.0 38 ......................... GAAAGAAGGCGTGCATGTACACTGCCTCTGTCTTCCCG 1555213 25 100.0 40 ......................... TACCAATTTTTGTGGTCTCGACGGCCTCTTCAAGGAGGAA 1555278 25 100.0 38 ......................... TTCCTCGGAGAAGGACAAGACAGTGTCTGGGACACGAG 1555341 25 100.0 39 ......................... TCTTATAATTAACGATGAAAAAGCGCAGTTGTTCCTTTT 1555405 25 100.0 41 ......................... TGCAAAAATTTTCCCGCGGCTATCAATTAACATTCTCGCGA 1555471 25 100.0 39 ......................... GGAAGGCCTATGTCGAGCTAGTCTTCCAGCGCCCGGACG 1555535 25 100.0 39 ......................... CCATGCTGCAGGCCACCGGCATGCACCCCGCGCTGGTTC 1555599 25 100.0 42 ......................... TTACCCCCGTAAGCCACGAGGACGTACGTCCCGTTCGGCACG 1555666 25 100.0 43 ......................... CATGGAGACTGCTCACCTCCTCTCCTCGTGGAGGAGAGAACAA 1555734 25 100.0 41 ......................... TCGAGAGCAGGGCCATGGCCGCGCCCGCCGCAGCGGCTGAC 1555800 25 100.0 47 ......................... GACAAGCCAGCGAATCAATGTCTCATTGATGCGCTCTGGAACCTTGG 1555872 25 100.0 39 ......................... CCTGGAACGCCTTCCCGGCCTGCGCCAAGGAGACAAGCG 1555936 25 100.0 43 ......................... GGGTGTGTCGGCCTCGGCCAGGGTCACCTGGGAGACGTTGAGG 1556004 25 100.0 40 ......................... ATAGACTCCGGCTTGCCCGCCGCGAACTATACACTCGACG 1556069 25 100.0 45 ......................... TTTCCCATAATTTATGATGGTTTTTTCTCTGTTTCATGCTAGAGA 1556139 25 100.0 43 ......................... CCCAGGAGTAAGGTGGTCTTGGTTCCCACTTTCGTCTGAGAAG 1556207 25 100.0 38 ......................... GCAGGCCTCGTACTGCGCCGCTGGAACACCTGGGAGAA 1556270 25 100.0 42 ......................... GGTGTATTCGTAAATGATTCGTGGCTTGCATTAGACATTTTG 1556337 25 100.0 41 ......................... TTCGAACCTCCACACCCCGTGGAGACGGTCGTAGACGTACC 1556403 25 100.0 39 ......................... ACGCCAGCTCGGTCGCCGGCGCCGGCTTCAGTTCAGTGA 1556467 25 100.0 39 ......................... TGTTAAAGTATACATTCACATCATCAACTGCATTCTTGA 1556531 25 100.0 44 ......................... GTTGACGTAATAAACGCCCTGAACTGTCACCACCTTAAGAAAAT 1556600 25 100.0 41 ......................... GAGCACGTTGAGCGCATGAAAAGACTCGGGGAGATGCCGCT A [1556612] 1556667 25 100.0 52 ......................... CCATGAGGGCGCGGAGAGGCGTTACGCGTACTAAGACGCCGGAGACAATTGT 1556744 25 100.0 39 ......................... AGGAGGAGTTGTTTGGGCAATATCTCCTTTGGGCCATTG 1556808 25 88.0 0 ...............TG.......T | ========== ====== ====== ====== ========================= ==================================================== ================== 111 25 99.6 41 GAAGAAGTCAAGAGACAATAGAAAG # Left flank : TCACTCGCGGGCTTCAAGCCTCTCACCCTCCTCAGGTAGACGTCGCGCTTCGACGGGCAGGGGGACGAGACTTCGCTTACTGTGGGCATGAAGCCACGCCTGGGGCCGACGAGCTCGAGCCTCCACCCCCTGAGCTCGACTACTAGATCCCCGGCTACAACGCCTCTAACTCTCTCTAGCACAGGTGCTGGAAACATATTACTCATTTGAAATCTATTTCAAGAAATACAAATAAATATTTCTCCAAGGAAGAACCCAGGGGACAAAGAGCAATATTTCAGAGAGGAATTTATGAAACCCCACCGAGAATTGATAAACACTATTTTCCACAGTGAAAATCCTCCGACTATTTATCCCTTTCTCTGGGAGTGTTCCCGTGGAACAATCCAGTGCTACTTTATAAATCAATTTTCATTAAAGTTGTGAACACTTAAAATAGAGGGAGGGTTTGGTTTCACAACCACAGGAAGAAATTTGCTTATCAAGCCGTGTGCACAGAG # Right flank : TAGGCAATCCGGGGGCAAAGTAAAATAAAATAAATAGGATGGGAGGCTGTTTCTTGCCGTCCTGGCCTGTGTGGCCGGCGGTGGATAGGTATTTTTGCCTTCTCGCCGTTGTCTTCGGGGGTGGTGGGCTTGGGCAGGCTGTTCGTGATAACGCTCGGCTTCGACGAGAAGTTCGCGGTGCGCGCGCTGATGAGGCGTGGCGTGGGGTGGGATGACGGCGTGGTCGTGTTCGTGCCCCGGGAGGAGGTGAGGGACGAGAGGGCTGAGAGGGCCCTGGACGCCCTGAGGAAGATCGTGGAGGGCCTCGTGGGGGGCGGGCTGCGGGAGGTCGAGCTGGAGGTCGGGGATCTCGTCAGCGCTGTCTCCGCTGTCCGCTCCACTGTTCTCTCGTACGGCGCCTCGGAGGTCTACGGGAGCCTCGGAGGGGGGATGAGGGCCCTCGTCGTGGAAGTCCTGCTTGGGCTGCTGATGCTCGAGGGCGTCAGGGTCTACGTGGACAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGAAGTCAAGAGACAATAGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //